FFCP PHASE1:Hg19::chr17:79826055..79826064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=434bp_to_BC007630_5end | |association_with_transcript=434bp_to_BC007630_5end | ||
|cluster_id=chr17:79826055..79826064,- | |||
|description=CAGE_peak_23_at_ARHGDIA_5end | |description=CAGE_peak_23_at_ARHGDIA_5end | ||
|id=chr17:79826055..79826064,- | |id=chr17:79826055..79826064,- | ||
|ontology_enrichment_celltype=CL:0002371!3.75e-12!591;CL:0000144!4.94e-12!625;CL:0000548!1.05e-10!679;CL:0000004!1.05e-10!679;CL:0000255!1.05e-10!679;CL:0000012!4.97e-10!682;CL:0000055!1.21e-09!180;CL:0000057!7.10e-07!75;CL:0000003!7.59e-07!722 | |ontology_enrichment_celltype=CL:0002371!3.75e-12!591;CL:0000144!4.94e-12!625;CL:0000548!1.05e-10!679;CL:0000004!1.05e-10!679;CL:0000255!1.05e-10!679;CL:0000012!4.97e-10!682;CL:0000055!1.21e-09!180;CL:0000057!7.10e-07!75;CL:0000003!7.59e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.67e-08;5!CL:0000135;1.07e-07;3!CL:0000388;1.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.20e-08,5;CL:0000135,1.92e-08,3;CL:0000388,1.92e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.09e-08;3!DOID:127;4.09e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.53e-08,3;DOID:127,1.53e-08,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;3.64e-13;7!UBERON:0003834;1.67e-08;5!UBERON:0001533;1.67e-08;5!UBERON:0007846;1.07e-07;3!UBERON:0000043;1.07e-07;3!UBERON:0007845;1.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,2.04e-13,7;UBERON:0007500,3.11e-10,59;UBERON:0001981,3.11e-10,59;UBERON:0004537,3.11e-10,59;UBERON:0006965,3.11e-10,59;UBERON:0000055,2.57e-09,68;UBERON:0003834,1.20e-08,5;UBERON:0001533,1.20e-08,5;UBERON:0007846,1.92e-08,3;UBERON:0000043,1.92e-08,3;UBERON:0007845,1.92e-08,3;UBERON:0002049,2.17e-08,78;UBERON:0007798,2.17e-08,78;UBERON:0001637,3.32e-08,42;UBERON:0003509,3.32e-08,42;UBERON:0004572,3.32e-08,42;UBERON:0004872,9.50e-08,83;UBERON:0003914,8.91e-07,117 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.704772020479856,0,0.446961094427288,0,0,0,0.783556884599516,0,4.88460817580699,0,0.263766978228454,0.37129905888014,0.662794751455832,0,1.20538905604795,0,0.487932798790507,0.123121058076788,0.816002764977012,0.313454721478088,0.286235987131057,0.410623275218653,0.502170558379211,0.61130724598361,0.821005894499457,0.472264687882075,0,0,0.309632246632152,0,1.50602959389125,1.47901604066715,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0.257575567634187,0.145398238779565,2.64513160582167,0.242584061187816,1.62700325833979,1.23350366406548,0,0.863077176966451,0.768482119587302,0.47296445977717,0,0.645484683583826,0,1.31769637679823,1.36453075028923,0.224723484445085,0.612167784741805,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,1.24564449799115,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0,0.896639238079726,0.390178042679635,0.164437904603676,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0.670700859703636,0.12786256184353,1.44575660953827,0,1.01392563272577,2.3858578411533,0.486634870302636,0.0945348171640679,0.665188192387692,0.175669571386252,0.130979075497713,0,0.741568885568859,0,0.174129737299267,0.664789802594326,0,0,0,0.198762407366705,0,0.694281003215189,0,2.09749718104953,1.37559020970034,0.626984899610432,0,0,0,1.20848795132744,0.760272105718513,1.46437234528902,0.367663080345869,4.86085168729056,0.267899184852239,0.44905874525234,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0,0.993943903390637,1.2663051166458,0.264818361626438,0.286836620748814,1.41867352879343,0.560677600142307,0,2.4666754841716,0,0.538842688278752,0.490385709340376,0.151357427644931,0,0,0.624320153660641,0,0.896692083310806,0.704606991862589,0.323745888736263,0.842704840213491,0.204154171254893,0.61417158655884,0.413303124703062,2.37600571456411,0.741800787835671,0,1.43723628363248,0.673344455816265,0.750711119231785,0.277064115484183,0.877955241761676,1.22595118319608,0.751190294532984,0.794025282120147,0.538168907066586,0.213557388818567,0,0.900273288253207,0.412210116953756,0,0,0,0.876933046450788,1.00973509697646,0.184099797284599,0.161646056818812,0.355009592516614,0.806016785821122,0.339121184620975,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0.116193942869518,0.518305275076852,0.504641701751257,0,0,1.92972281457866,1.38134921352481,0.464367928031979,1.44375896333917,0.946454400318751,0,0,0.992645754591546,0.871517776369625,0.474541238222193,0.269662616320329,0.588664395376038,0.769494313892781,2.95262181849859,2.80483547606892,0,2.94017422771084,0,0,0,0,0,0,0.548751427043128,0,0.502644862058154,0.277765335475589,0,2.07986957055916,0,0.115930404975077,0.234817388471643,0.577465791044295,0,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0.492663237895943,0.088048434013226,0.829312462163088,0.432359860250884,0.37872730027914,0.126995788584338,0.381988425558278,2.34434894420094,0,1.43958489784653,1.20137223137567,1.71495859578347,0.224262168690721,0,0.4400297149257,0.387815147273333,0,0,1.06375246633948,1.04007436911366,0.257207374262142,1.41849132023278,1.5985330740966,0,0.542621605391443,0,0.977208552881205,0.710783897485092,0.791951872933429,0.301439377059586,0.871533458600294,0.699810938274399,0,1.50677127429638,0,0.958499421966331,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0.112085143993527,0.197030760201927,0,0.256686072559497,0,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0.749007023947182,2.99161459204025,0.414415513436035,0.12269149171914,1.00034104211935,0.542530047399471,1.03985430765404,1.78428988797162,0.473107245101804,0.234282829985426,0.300946099727719,0,3.10419213877515,0.664225598535437,0.553107505625109,0.868836144680828,0.391602314925481,1.71571711905428,0,0.215714200818617,0.640365346820666,0.303127571446259,1.66435439510497,0.604780586659361,0,0.153461973288062,1.96462066103151,0.384417447767103,1.02341449813341,0.482561763430822,1.48418066444991,0.771048469013278,0.887808626565635,0.328508624055237,0.519254429183621,1.74315567689939,0.604297247958111,1.20303882181971,1.93370076765382,0.574072240823034,0.728364672026868,0.524497659837696,0.451199612907412,0.693138033939733,0,1.46139224653261,0.211103257785751,0,1.02056223165909,0.647747748306418,0,0.270946437543853,2.50844886927427,0.509752546090077,0,0,0.219259876645935,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| ||
|short_description=p23@ARHGDIA | |short_description=p23@ARHGDIA | ||
}} | }} |
Latest revision as of 08:50, 18 September 2015
Short description: | p23@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 434bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.20e-08 | 5 |
fibrocyte | 1.92e-08 | 3 |
tendon cell | 1.92e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 2.04e-13 | 7 |
epithelial tube open at both ends | 3.11e-10 | 59 |
blood vessel | 3.11e-10 | 59 |
blood vasculature | 3.11e-10 | 59 |
vascular cord | 3.11e-10 | 59 |
vessel | 2.57e-09 | 68 |
thoracic segment blood vessel | 1.20e-08 | 5 |
subclavian artery | 1.20e-08 | 5 |
dense regular connective tissue | 1.92e-08 | 3 |
tendon | 1.92e-08 | 3 |
regular connective tissue | 1.92e-08 | 3 |
vasculature | 2.17e-08 | 78 |
vascular system | 2.17e-08 | 78 |
artery | 3.32e-08 | 42 |
arterial blood vessel | 3.32e-08 | 42 |
arterial system | 3.32e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 9.50e-08 | 83 |
epithelial tube | 8.91e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.53e-08 | 3 |
leiomyoma | 1.53e-08 | 3 |