FFCP PHASE1:Hg19::chr10:49674719..49674730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000489984_5end | |association_with_transcript=8bp_to_ENST00000489984_5end | ||
|cluster_id=chr10:49674719..49674730,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_12_at_ARHGAP22_5end | |description=CAGE_peak_12_at_ARHGAP22_5end | ||
|id=chr10:49674719..49674730,- | |id=chr10:49674719..49674730,- | ||
|ontology_enrichment_celltype=CL:0002076!1.24e-27!43;CL:0000223!6.53e-20!59;CL:0002368!1.69e-18!13;CL:0002159!2.74e-18!13;CL:0002251!1.70e-14!21;CL:0000066!2.18e-12!254;CL:0000622!5.71e-12!5;CL:0002202!3.76e-10!9;CL:0002632!3.76e-10!9;CL:0002077!5.60e-10!33;CL:0000154!6.60e-10!6;CL:0002166!1.05e-08!3;CL:0002328!1.08e-08!3;CL:0000068!1.11e-08!3;CL:0000069!1.11e-08!3;CL:0000307!1.11e-08!3;CL:0000377!1.11e-08!3;CL:0002621!2.78e-08!3;CL:0000362!7.16e-08!8;CL:0002623!9.03e-08!3;CL:0000076!2.40e-07!62;CL:0000240!2.66e-07!6;CL:0000311!2.66e-07!6;CL:0000079!2.66e-07!6;CL:0000237!2.66e-07!6;CL:0000036!2.66e-07!6;CL:0000357!2.66e-07!6;CL:0000114!2.66e-07!6 | |ontology_enrichment_celltype=CL:0002076!1.24e-27!43;CL:0000223!6.53e-20!59;CL:0002368!1.69e-18!13;CL:0002159!2.74e-18!13;CL:0002251!1.70e-14!21;CL:0000066!2.18e-12!254;CL:0000622!5.71e-12!5;CL:0002202!3.76e-10!9;CL:0002632!3.76e-10!9;CL:0002077!5.60e-10!33;CL:0000154!6.60e-10!6;CL:0002166!1.05e-08!3;CL:0002328!1.08e-08!3;CL:0000068!1.11e-08!3;CL:0000069!1.11e-08!3;CL:0000307!1.11e-08!3;CL:0000377!1.11e-08!3;CL:0002621!2.78e-08!3;CL:0000362!7.16e-08!8;CL:0002623!9.03e-08!3;CL:0000076!2.40e-07!62;CL:0000240!2.66e-07!6;CL:0000311!2.66e-07!6;CL:0000079!2.66e-07!6;CL:0000237!2.66e-07!6;CL:0000036!2.66e-07!6;CL:0000357!2.66e-07!6;CL:0000114!2.66e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.97e-39;13!CL:0002202;1.83e-25;9!CL:0002632;1.83e-25;9!CL:0002076;1.89e-25;42!CL:0002159;6.67e-22;14!CL:0002328;4.24e-20;3!CL:0000307;4.24e-20;3!CL:0002166;1.24e-19;3!CL:0000240;1.65e-17;6!CL:0000311;1.65e-17;6!CL:0000079;1.65e-17;6!CL:0000237;1.65e-17;6!CL:0000312;2.41e-12;5!CL:0002251;2.81e-11;20!CL:0002077;7.48e-10;34!CL:0002621;2.02e-09;3!CL:0002252;2.89e-08;1!CL:0002336;1.11e-07;1!CL:0002261;1.11e-07;1!CL:0002170;1.11e-07;1!CL:0000244;2.84e-07;4!CL:0000731;2.84e-07;4!CL:0000362;4.59e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,7.17e-39,13;CL:0002076,1.41e-31,42;CL:0002202,2.60e-25,9;CL:0002632,2.60e-25,9;CL:0000223,4.81e-22,58;CL:0002159,5.36e-22,14;CL:0002166,5.01e-20,3;CL:0002328,5.35e-20,3;CL:0000068,5.71e-20,3;CL:0000069,5.71e-20,3;CL:0000307,5.71e-20,3;CL:0000377,5.71e-20,3;CL:0000240,1.96e-17,6;CL:0000311,1.96e-17,6;CL:0000079,1.96e-17,6;CL:0000237,1.96e-17,6;CL:0000036,1.96e-17,6;CL:0000357,1.96e-17,6;CL:0000114,1.96e-17,6;CL:0000066,1.79e-16,253;CL:0000312,3.04e-12,5;CL:0002251,3.66e-11,20;CL:0002077,4.62e-11,34;CL:0002621,3.67e-09,3;CL:0002321,4.57e-09,250;CL:0002252,2.70e-08,1;CL:0002336,9.72e-08,1;CL:0002261,9.72e-08,1;CL:0002170,9.72e-08,1;CL:0000244,2.75e-07,4;CL:0000731,2.75e-07,4;CL:0000362,5.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;4.24e-20;3!CL:0000357;1.65e-17;6!CL:0000114;1.65e-17;6!CL:0000223;1.71e-11;58!UBERON:0000358;4.98e-08;1 | |||
|ontology_enrichment_disease=DOID:1749!1.41e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.15e-13!72;UBERON:0000161!1.01e-11!35;UBERON:0000166!1.53e-11!21;UBERON:0004119!1.47e-10!169;UBERON:0000925!1.47e-10!169;UBERON:0006595!1.47e-10!169;UBERON:0000165!9.00e-10!28;UBERON:0000930!9.00e-10!28;UBERON:0003102!2.84e-09!95;UBERON:0004815!1.08e-08!3;UBERON:0002031!1.08e-08!3;UBERON:0001949!2.78e-08!3;UBERON:0007196!4.30e-08!14;UBERON:0001558!4.30e-08!14;UBERON:0003729!4.67e-08!5;UBERON:0000065!6.70e-07!53;UBERON:0001007!8.90e-07!155;UBERON:0001555!8.90e-07!155;UBERON:0007026!8.90e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.24e-20;3!UBERON:0002031;4.24e-20;3!UBERON:0007196;4.33e-15;15!UBERON:0001558;4.33e-15;15!UBERON:0001708;7.09e-15;4!UBERON:0008895;7.09e-15;4!UBERON:0002185;2.76e-12;5!UBERON:0011159;5.19e-12;5!UBERON:0005178;1.67e-10;34!UBERON:0002224;1.67e-10;34!UBERON:0005181;3.59e-10;35!UBERON:0000065;4.57e-10;44!UBERON:0004807;5.28e-10;22!UBERON:0001949;2.02e-09;3!UBERON:0005911;3.25e-09;36!UBERON:0003126;6.46e-09;7!UBERON:0000485;6.46e-09;7!UBERON:0001005;6.46e-09;7!UBERON:0000486;1.18e-08;12!UBERON:0003729;4.28e-08;13!UBERON:0000072;3.17e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.35e-20,3;UBERON:0002031,5.35e-20,3;UBERON:0001708,3.62e-15,4;UBERON:0008895,3.62e-15,4;UBERON:0007196,5.31e-15,15;UBERON:0001558,5.31e-15,15;UBERON:0011159,3.04e-12,5;UBERON:0002185,3.16e-12,5;UBERON:0001004,3.94e-12,74;UBERON:0005178,4.42e-11,34;UBERON:0002224,4.42e-11,34;UBERON:0005181,9.89e-11,35;UBERON:0010188,2.75e-10,6;UBERON:0002539,2.75e-10,6;UBERON:0008816,2.75e-10,6;UBERON:0000065,3.04e-10,54;UBERON:0004119,2.53e-09,160;UBERON:0000925,2.53e-09,160;UBERON:0006595,2.53e-09,160;UBERON:0001949,3.67e-09,3;UBERON:0003126,7.32e-09,7;UBERON:0001005,7.32e-09,7;UBERON:0003729,5.58e-08,13;UBERON:0004807,1.19e-07,28;UBERON:0008947,1.80e-07,38;UBERON:0003258,1.80e-07,38;UBERON:0000485,5.32e-07,9;UBERON:0000915,7.48e-07,52 | |||
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| ||
|short_description=p12@ARHGAP22 | |short_description=p12@ARHGAP22 | ||
}} | }} |
Latest revision as of 09:05, 18 September 2015
Short description: | p12@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARHGAP22_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 8bp_to_ENST00000489984_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.35e-20 | 3 |
epithelium of bronchus | 5.35e-20 | 3 |
jaw skeleton | 3.62e-15 | 4 |
splanchnocranium | 3.62e-15 | 4 |
tracheobronchial tree | 5.31e-15 | 15 |
lower respiratory tract | 5.31e-15 | 15 |
primary subdivision of cranial skeletal system | 3.04e-12 | 5 |
bronchus | 3.16e-12 | 5 |
respiratory system | 3.94e-12 | 74 |
thoracic cavity element | 4.42e-11 | 34 |
thoracic cavity | 4.42e-11 | 34 |
thoracic segment organ | 9.89e-11 | 35 |
protuberance | 2.75e-10 | 6 |
pharyngeal arch | 2.75e-10 | 6 |
embryonic head | 2.75e-10 | 6 |
respiratory tract | 3.04e-10 | 54 |
endoderm-derived structure | 2.53e-09 | 160 |
endoderm | 2.53e-09 | 160 |
presumptive endoderm | 2.53e-09 | 160 |
gingival epithelium | 3.67e-09 | 3 |
trachea | 7.32e-09 | 7 |
respiratory airway | 7.32e-09 | 7 |
mouth mucosa | 5.58e-08 | 13 |
respiratory system epithelium | 1.19e-07 | 28 |
respiratory primordium | 1.80e-07 | 38 |
endoderm of foregut | 1.80e-07 | 38 |
simple columnar epithelium | 5.32e-07 | 9 |
thoracic segment of trunk | 7.48e-07 | 52 |