FFCP PHASE1:Hg19::chr1:164528667..164528674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA05 | |UniProt=F8WA05 | ||
|association_with_transcript=23bp_to_ENST00000340699_5end | |association_with_transcript=23bp_to_ENST00000340699_5end | ||
|cluster_id=chr1:164528667..164528674,+ | |||
|description=CAGE_peak_18_at_PBX1_5end | |description=CAGE_peak_18_at_PBX1_5end | ||
|id=chr1:164528667..164528674,+ | |id=chr1:164528667..164528674,+ | ||
|ontology_enrichment_celltype=CL:0000540;6.85e-27;6!CL:0000404;6.85e-27;6!CL:0002319;2.78e-14;25!CL:0000746;7.45e-10;3!CL:0000737;1.35e-07;4 | |ontology_enrichment_celltype=CL:0000133!1.66e-08!59;CL:0002319!9.85e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0000540;6.85e-27;6!CL:0000404;6.85e-27;6!CL:0002319;2.78e-14;25!CL:0000746;7.45e-10;3!CL:0000737;1.35e-07;4 | ||
|ontology_enrichment_disease=DOID:3307;3.53e-14;2!DOID:3095;2.80e-07;22!DOID:2994;2.80e-07;22 | |ontology_enrichment_celltype_v019_2=CL:0000540,5.88e-27,6;CL:0000031,5.88e-27,6;CL:0000404,5.88e-27,6;CL:0000047,3.41e-20,8;CL:0002319,3.00e-14,25;CL:0000133,1.04e-10,59;CL:0000746,7.81e-10,3;CL:0000513,7.81e-10,3;CL:0000221,1.73e-08,72;CL:0000737,1.40e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0000922;5.91e-08;49!UBERON:0007029;9.69e-08;1 | |ontology_enrichment_development_v019=CL:0000031;6.85e-27;6!CL:0000513;7.45e-10;3!CL:0000133;3.54e-07;59 | ||
|ontology_enrichment_disease=DOID:3095!7.83e-07!22;DOID:2994!7.83e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3307;3.53e-14;2!DOID:3095;2.80e-07;22!DOID:2994;2.80e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.89e-14,2;DOID:3095,2.30e-07,22;DOID:2994,2.30e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.71e-17!94;UBERON:0001016!4.71e-17!94;UBERON:0005743!5.26e-16!86;UBERON:0001017!3.74e-15!82;UBERON:0000924!1.64e-14!173;UBERON:0006601!1.64e-14!173;UBERON:0004121!1.93e-13!169;UBERON:0002346!2.16e-13!90;UBERON:0003075!3.23e-12!86;UBERON:0007284!3.23e-12!86;UBERON:0000033!6.00e-12!123;UBERON:0000153!1.64e-11!129;UBERON:0007811!1.64e-11!129;UBERON:0000955!3.42e-11!69;UBERON:0006238!3.42e-11!69;UBERON:0003056!1.10e-10!61;UBERON:0002616!3.06e-09!59;UBERON:0001049!3.69e-09!57;UBERON:0005068!3.69e-09!57;UBERON:0006241!3.69e-09!57;UBERON:0007135!3.69e-09!57;UBERON:0000475!1.31e-08!365;UBERON:0000956!7.29e-08!25;UBERON:0000203!7.29e-08!25;UBERON:0002020!1.96e-07!34;UBERON:0003528!1.96e-07!34;UBERON:0001869!3.33e-07!32;UBERON:0001893!4.28e-07!34;UBERON:0000119!5.96e-07!312;UBERON:0000970!7.11e-07!20;UBERON:0002791!9.65e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.91e-08;49!UBERON:0007029;9.69e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.43e-09,81;UBERON:0007029,5.33e-08,1;UBERON:0001016,6.74e-08,89 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0,0.313454721478088,1.43117993565528,0.547497700291537,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.12786256184353,0,0,0,0,0,1.22895262313288,0.886917589850256,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0,0,0,0,0.23486899728753,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0,0,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0,0,0,0,0.276149695926898,0.80823028409406,0,0.302256294682921,0.339121184620975,0,0,0,1.58565817968474,0.662648841607426,1.04574548582567,0.414644220061482,0.504641701751257,1.82488679537915,0,0,0,0,0.721879481669586,0.236613600079688,0.337169380156203,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0,0,0,0,0.531876233169741,0,0,0,0,1.00084595560703,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,3.09315525111078,0,1.27587750330633,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.391602314925481,0,0,0,0,0,0,0,0.744323423456331,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0.290033387828457,0,0.267096106940212,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0.371072392647405,1.99613798001194,0.260427761085233,0.787139999965761,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,0.846452843541768,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.353830258013357,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0,0.426905989478705,0,0,0,0.171594997861965,0,0.124252535565433,0.235694034616795,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0,1.16495949527454,0,0,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,1.12527203925513,1.92555211236127,1.66176135211674,0,0,0.425246896606173,0.335434687599266,0.0788057072991982,0.577000469484979,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0.171086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0.327872630709804,0.628216385000937,0,0.244052529803926,0,0,0.110929051536852,0.18628920882415,3.04366996859708,0.124980407962107,0,0,0,0,0.144921028610825,0.298509605773748,0.467426619694449,0,0,0,0,0,0.302461847526478,0,0,0.318593534327405,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.646948868380091,0.943595651135378,0.109209638192014,0.169732529954025,3.40119872162693,0,0.558644917973244,0,0,0,0.705351887381368,0.3062454773532,0.321146125482298,0,0.159633859057151,0.615349092722265,1.76450187355203,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0.202612753855184,0,0.206686796501184,0.253663240775627,2.18789923607288,0,0,0.527613733078862,0,0,1.00885116665647,0,0.227662191351298,0,0,0,0.20390919893049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| ||
|short_description=p18@PBX1 | |short_description=p18@PBX1 | ||
}} | }} |
Latest revision as of 09:10, 18 September 2015
Short description: | p18@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000340699_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | F8WA05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.88e-27 | 6 |
neuroblast | 5.88e-27 | 6 |
electrically signaling cell | 5.88e-27 | 6 |
neuronal stem cell | 3.41e-20 | 8 |
neural cell | 3.00e-14 | 25 |
neurectodermal cell | 1.04e-10 | 59 |
cardiac muscle cell | 7.81e-10 | 3 |
cardiac muscle myoblast | 7.81e-10 | 3 |
ectodermal cell | 1.73e-08 | 72 |
striated muscle cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.43e-09 | 81 |
surface | 5.33e-08 | 1 |
nervous system | 6.74e-08 | 89 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.89e-14 | 2 |
germ cell and embryonal cancer | 2.30e-07 | 22 |
germ cell cancer | 2.30e-07 | 22 |