FFCP PHASE1:Hg19::chr10:49893502..49893519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57705 | |EntrezGene=57705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29323 | |HGNC=29323 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZS81 | |UniProt=Q6ZS81 | ||
|association_with_transcript=0bp_to_NM_020945,uc001jha.3_5end | |association_with_transcript=0bp_to_NM_020945,uc001jha.3_5end | ||
|cluster_id=chr10:49893502..49893519,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_4_at_WDFY4_5end | |description=CAGE_peak_4_at_WDFY4_5end | ||
|id=chr10:49893502..49893519,+ | |id=chr10:49893502..49893519,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.90e-27!24;CL:0000826!3.90e-27!24;CL:0002032!4.87e-23!165;CL:0000837!4.87e-23!165;CL:0000037!5.20e-23!172;CL:0000566!5.20e-23!172;CL:0000988!3.86e-21!182;CL:0002031!5.63e-18!124;CL:0000738!2.15e-17!140;CL:0002087!2.50e-15!119;CL:0000838!1.57e-13!52;CL:0000542!3.43e-13!53;CL:0000051!3.43e-13!53;CL:0000763!9.07e-11!112;CL:0000049!9.07e-11!112;CL:0000817!1.75e-10!3;CL:0000840!6.26e-09!5;CL:0001029!6.26e-09!5;CL:0000236!1.06e-07!14;CL:0000785!1.15e-07!2;CL:0000955!1.15e-07!2;CL:0000818!1.15e-07!2;CL:0000954!1.15e-07!2;CL:0000816!1.15e-07!2;CL:0000451!4.35e-07!10;CL:0000766!7.93e-07!76 | |ontology_enrichment_celltype=CL:0000945!3.90e-27!24;CL:0000826!3.90e-27!24;CL:0002032!4.87e-23!165;CL:0000837!4.87e-23!165;CL:0000037!5.20e-23!172;CL:0000566!5.20e-23!172;CL:0000988!3.86e-21!182;CL:0002031!5.63e-18!124;CL:0000738!2.15e-17!140;CL:0002087!2.50e-15!119;CL:0000838!1.57e-13!52;CL:0000542!3.43e-13!53;CL:0000051!3.43e-13!53;CL:0000763!9.07e-11!112;CL:0000049!9.07e-11!112;CL:0000817!1.75e-10!3;CL:0000840!6.26e-09!5;CL:0001029!6.26e-09!5;CL:0000236!1.06e-07!14;CL:0000785!1.15e-07!2;CL:0000955!1.15e-07!2;CL:0000818!1.15e-07!2;CL:0000954!1.15e-07!2;CL:0000816!1.15e-07!2;CL:0000451!4.35e-07!10;CL:0000766!7.93e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.93e-50;24!CL:0000840;8.03e-20;5!CL:0000946;7.08e-14;1!CL:0000786;7.08e-14;1!CL:0000785;1.42e-13;1!CL:0000819;1.42e-13;1!CL:0000990;2.00e-13;8!CL:0000542;1.53e-11;53!CL:0000451;4.34e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.50e-50,24;CL:0000826,2.50e-50,24;CL:0000785,9.87e-26,2;CL:0000955,9.87e-26,2;CL:0000818,9.87e-26,2;CL:0000954,9.87e-26,2;CL:0000816,9.87e-26,2;CL:0000838,1.13e-22,52;CL:0000542,3.16e-22,53;CL:0000051,3.16e-22,53;CL:0000840,8.04e-20,5;CL:0001029,8.04e-20,5;CL:0000817,1.64e-17,3;CL:0002087,1.25e-16,115;CL:0002031,7.10e-16,120;CL:0000946,7.55e-14,1;CL:0000786,7.55e-14,1;CL:0000980,7.55e-14,1;CL:0000738,7.83e-14,136;CL:0000819,1.10e-13,1;CL:0000990,2.00e-13,8;CL:0002032,2.03e-13,161;CL:0000837,2.03e-13,161;CL:0000037,8.63e-13,168;CL:0000988,4.69e-12,177;CL:0000451,4.34e-11,10;CL:0000236,1.70e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;1.19e-25;2!CL:0000051;1.53e-11;53!UBERON:0004872;6.29e-08;7 | |||
|ontology_enrichment_disease=DOID:2531!9.94e-19!51;DOID:0060083!9.94e-19!51;DOID:1240!1.38e-11!39;DOID:0060058!2.64e-11!10;DOID:8692!4.75e-11!31;DOID:74!6.30e-07!2 | |ontology_enrichment_disease=DOID:2531!9.94e-19!51;DOID:0060083!9.94e-19!51;DOID:1240!1.38e-11!39;DOID:0060058!2.64e-11!10;DOID:8692!4.75e-11!31;DOID:74!6.30e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.08e-20;10!DOID:630;5.15e-14;1!DOID:0050177;5.15e-14;1!DOID:0050427;5.15e-14;1!DOID:2355;7.08e-14;1!DOID:0060073;1.42e-13;1!DOID:8675;1.42e-13;1!DOID:74;1.40e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.61e-20,10;DOID:630,5.15e-14,1;DOID:0050177,5.15e-14,1;DOID:0050427,5.15e-14,1;DOID:2355,6.65e-14,1;DOID:0060073,1.10e-13,1;DOID:8675,1.10e-13,1;DOID:74,1.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.26e-11!7;UBERON:0002106!4.70e-10!3;UBERON:0004854!4.70e-10!3;UBERON:0009034!4.70e-10!3;UBERON:0002095!4.70e-10!3;UBERON:0004782!4.70e-10!3;UBERON:0003281!4.70e-10!3;UBERON:0009664!4.70e-10!3;UBERON:0002296!4.70e-10!3;UBERON:0005602!4.70e-10!3;UBERON:0001179!4.70e-10!3;UBERON:0006293!4.70e-10!3;UBERON:0002193!7.22e-10!112;UBERON:0002390!3.23e-09!102;UBERON:0003061!3.23e-09!102;UBERON:0002405!1.25e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.95e-17;3!UBERON:0004177;9.62e-11;5!UBERON:0005057;9.62e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.20e-17,3;UBERON:0004854,3.20e-17,3;UBERON:0009034,3.20e-17,3;UBERON:0002095,3.20e-17,3;UBERON:0004782,3.20e-17,3;UBERON:0003281,3.20e-17,3;UBERON:0009664,3.20e-17,3;UBERON:0002296,3.20e-17,3;UBERON:0005602,3.20e-17,3;UBERON:0001179,3.20e-17,3;UBERON:0006293,3.20e-17,3;UBERON:0004177,6.52e-08,7;UBERON:0005057,6.52e-08,7;UBERON:0000945,4.99e-07,8;UBERON:0010039,4.99e-07,8 | |||
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| ||
|short_description=p4@WDFY4 | |short_description=p4@WDFY4 | ||
}} | }} |
Latest revision as of 09:28, 18 September 2015
Short description: | p4@WDFY4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WDFY4_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_NM_020945, uc001jha.3_5end |
EntrezGene: | WDFY4 |
HGNC: | 29323 |
UniProt: | Q6ZS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.50e-50 | 24 |
pro-B cell | 2.50e-50 | 24 |
mature B cell | 9.87e-26 | 2 |
pre-B-II cell | 9.87e-26 | 2 |
transitional stage B cell | 9.87e-26 | 2 |
small pre-B-II cell | 9.87e-26 | 2 |
immature B cell | 9.87e-26 | 2 |
lymphoid lineage restricted progenitor cell | 1.13e-22 | 52 |
lymphocyte | 3.16e-22 | 53 |
common lymphoid progenitor | 3.16e-22 | 53 |
immature conventional dendritic cell | 8.04e-20 | 5 |
common dendritic progenitor | 8.04e-20 | 5 |
precursor B cell | 1.64e-17 | 3 |
nongranular leukocyte | 1.25e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 7.10e-16 | 120 |
antibody secreting cell | 7.55e-14 | 1 |
plasma cell | 7.55e-14 | 1 |
plasmablast | 7.55e-14 | 1 |
leukocyte | 7.83e-14 | 136 |
B-1 B cell | 1.10e-13 | 1 |
conventional dendritic cell | 2.00e-13 | 8 |
hematopoietic oligopotent progenitor cell | 2.03e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-13 | 161 |
hematopoietic stem cell | 8.63e-13 | 168 |
hematopoietic cell | 4.69e-12 | 177 |
dendritic cell | 4.34e-11 | 10 |
B cell | 1.70e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.20e-17 | 3 |
gastrointestinal system mesentery | 3.20e-17 | 3 |
stomach region | 3.20e-17 | 3 |
mesentery | 3.20e-17 | 3 |
gastrointestinal system serosa | 3.20e-17 | 3 |
mesentery of stomach | 3.20e-17 | 3 |
gut mesentery | 3.20e-17 | 3 |
dorsal mesentery | 3.20e-17 | 3 |
dorsal mesogastrium | 3.20e-17 | 3 |
peritoneal cavity | 3.20e-17 | 3 |
spleen primordium | 3.20e-17 | 3 |
hemopoietic organ | 6.52e-08 | 7 |
immune organ | 6.52e-08 | 7 |
stomach | 4.99e-07 | 8 |
food storage organ | 4.99e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.61e-20 | 10 |
genetic disease | 5.15e-14 | 1 |
monogenic disease | 5.15e-14 | 1 |
xeroderma pigmentosum | 5.15e-14 | 1 |
anemia | 6.65e-14 | 1 |
lymphatic system cancer | 1.10e-13 | 1 |
lymphosarcoma | 1.10e-13 | 1 |
hematopoietic system disease | 1.36e-07 | 2 |