FFCP PHASE1:Hg19::chr17:79919053..79919070,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147111 | |EntrezGene=147111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27106 | |HGNC=27106 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P988 | |UniProt=Q6P988 | ||
|association_with_transcript=0bp_to_NM_178493,uc010wvg.1_5end | |association_with_transcript=0bp_to_NM_178493,uc010wvg.1_5end | ||
|cluster_id=chr17:79919053..79919070,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_NOTUM_5end | |description=CAGE_peak_1_at_NOTUM_5end | ||
|id=chr17:79919053..79919070,- | |id=chr17:79919053..79919070,- | ||
|ontology_enrichment_celltype=CL:0000181!9.19e-09!12;CL:0000417!9.19e-09!12;CL:0000668!9.19e-09!12;CL:0000414!9.19e-09!12;CL:0000412!9.19e-09!12;CL:0000182!9.19e-09!12;CL:0002541!7.64e-07!3 | |ontology_enrichment_celltype=CL:0000181!9.19e-09!12;CL:0000417!9.19e-09!12;CL:0000668!9.19e-09!12;CL:0000414!9.19e-09!12;CL:0000412!9.19e-09!12;CL:0000182!9.19e-09!12;CL:0002541!7.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.10e-17;12!CL:0002541;7.18e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.84e-17,12;CL:0002541,7.19e-15,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.68e-10;11!UBERON:0009497;1.52e-08;13 | |||
|ontology_enrichment_disease=DOID:0050687!1.72e-08!143;DOID:3119!3.11e-08!14;DOID:305!8.32e-08!106 | |ontology_enrichment_disease=DOID:0050687!1.72e-08!143;DOID:3119!3.11e-08!14;DOID:305!8.32e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.77e-14!9;UBERON:0004921!1.87e-10!129;UBERON:0004185!1.87e-10!129;UBERON:0000077!8.59e-10!130;UBERON:0001007!1.19e-08!155;UBERON:0001555!1.19e-08!155;UBERON:0007026!1.19e-08!155;UBERON:0009497!9.49e-08!25;UBERON:0000015!9.49e-08!25;UBERON:0002423!9.49e-08!25;UBERON:0006235!9.49e-08!25;UBERON:0004161!9.49e-08!25;UBERON:0004119!1.16e-07!169;UBERON:0000925!1.16e-07!169;UBERON:0006595!1.16e-07!169;UBERON:0001041!4.40e-07!98;UBERON:0000476!7.64e-07!3;UBERON:0000920!7.64e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!2.77e-14!9;UBERON:0004921!1.87e-10!129;UBERON:0004185!1.87e-10!129;UBERON:0000077!8.59e-10!130;UBERON:0001007!1.19e-08!155;UBERON:0001555!1.19e-08!155;UBERON:0007026!1.19e-08!155;UBERON:0009497!9.49e-08!25;UBERON:0000015!9.49e-08!25;UBERON:0002423!9.49e-08!25;UBERON:0006235!9.49e-08!25;UBERON:0004161!9.49e-08!25;UBERON:0004119!1.16e-07!169;UBERON:0000925!1.16e-07!169;UBERON:0006595!1.16e-07!169;UBERON:0001041!4.40e-07!98;UBERON:0000476!7.64e-07!3;UBERON:0000920!7.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.36e-15;25!UBERON:0003124;7.18e-15;3!UBERON:0000920;7.18e-15;3!UBERON:0002107;1.22e-13;19!UBERON:0006925;1.22e-13;19!UBERON:0005631;1.88e-11;10!UBERON:0000158;1.88e-11;10!UBERON:0002365;8.88e-08;31!UBERON:0002330;8.88e-08;31!UBERON:0001737;1.85e-07;9!UBERON:0001557;1.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.23e-15,25;UBERON:0000015,1.23e-15,25;UBERON:0002423,1.23e-15,25;UBERON:0006235,1.23e-15,25;UBERON:0004161,1.23e-15,25;UBERON:0000920,7.19e-15,3;UBERON:0008835,1.08e-14,22;UBERON:0003894,1.08e-14,22;UBERON:0009854,5.55e-14,23;UBERON:0002107,1.15e-13,19;UBERON:0006925,1.15e-13,19;UBERON:0008836,1.15e-13,19;UBERON:0007499,9.86e-13,25;UBERON:0009856,3.52e-12,26;UBERON:0004921,4.17e-12,118;UBERON:0005631,2.05e-11,14;UBERON:0000158,2.05e-11,14;UBERON:0003124,5.38e-11,7;UBERON:0003929,7.58e-11,54;UBERON:0001041,3.16e-10,87;UBERON:0001007,5.47e-10,145;UBERON:0001555,5.47e-10,145;UBERON:0007026,5.47e-10,145;UBERON:0004119,1.25e-09,160;UBERON:0000925,1.25e-09,160;UBERON:0006595,1.25e-09,160;UBERON:0005911,1.40e-08,82;UBERON:0002365,7.19e-08,31;UBERON:0002330,7.19e-08,31;UBERON:0001737,2.13e-07,9;UBERON:0002368,7.96e-07,35 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47745269692145,0.816002764977012,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,2.01260960310899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,2.36613600079688,0.842923450390509,1.20505514941741,1.32352767278873,0.871517776369625,0.71181185733329,1.07865046528132,0.784885860501384,0.769494313892781,0,0,0,0,1.26755034821831,3.9313088667105,2.95394953340702,0,5.411491295897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,2.29632954224082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3262344627817,94.8659655518038,44.2250919574352,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.4840574000413,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,319.678865063767,5.04839957415486,0.307160702099232,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0,0,30.4344353792239,2.2439411102443,0,1388.61204831305,231.833508900114,1583.11328477535,0,0,0,0,0,0.503464760927528,0,0,0,0.163232808159148,0.282706142867882,19.2585889370461,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.36885967914362,0,0.213452994739353,0.799238438328521,0,1.25990255782507,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0,0,0,0,102.516435584159,115.417362080083,120.244737378122,116.068902516906,0.295282444544246,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,0,0,0,0,0,0,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,244.376173765365,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.506827321959218,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0.320075189082423,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95664888465099,0,0.20170506870352,0,0,0,7.09709213841817,0,0,0,0,0,0,0,0,0,0,0,0,0,254.575802366773,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,2.01339777236026,0.392600934460972,12.5575462731738,0,0,0,1.45713297917742,0.233939463462106,8.35593255677747,0,421.288886005321,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,1.26217249754548,0,0.436350690340377,2.1161073620616,0,0,0,0.126166424835079,0.98339014767326,0.380095503034311,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0,0 | ||
|short_description=p1@NOTUM | |short_description=p1@NOTUM | ||
}} | }} |
Latest revision as of 09:56, 18 September 2015
Short description: | p1@NOTUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOTUM_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_NM_178493, uc010wvg.1_5end |
EntrezGene: | NOTUM |
HGNC: | 27106 |
UniProt: | Q6P988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.84e-17 | 12 |
chorionic membrane mesenchymal stem cell | 7.19e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.23e-15 | 25 |
anatomical boundary | 1.23e-15 | 25 |
hepatobiliary system | 1.23e-15 | 25 |
foregut-midgut junction | 1.23e-15 | 25 |
septum transversum | 1.23e-15 | 25 |
egg chorion | 7.19e-15 | 3 |
hepatic diverticulum | 1.08e-14 | 22 |
liver primordium | 1.08e-14 | 22 |
digestive tract diverticulum | 5.55e-14 | 23 |
liver | 1.15e-13 | 19 |
digestive gland | 1.15e-13 | 19 |
liver bud | 1.15e-13 | 19 |
epithelial sac | 9.86e-13 | 25 |
sac | 3.52e-12 | 26 |
subdivision of digestive tract | 4.17e-12 | 118 |
extraembryonic membrane | 2.05e-11 | 14 |
membranous layer | 2.05e-11 | 14 |
chorion | 5.38e-11 | 7 |
gut epithelium | 7.58e-11 | 54 |
foregut | 3.16e-10 | 87 |
digestive system | 5.47e-10 | 145 |
digestive tract | 5.47e-10 | 145 |
primitive gut | 5.47e-10 | 145 |
endoderm-derived structure | 1.25e-09 | 160 |
endoderm | 1.25e-09 | 160 |
presumptive endoderm | 1.25e-09 | 160 |
endo-epithelium | 1.40e-08 | 82 |
exocrine gland | 7.19e-08 | 31 |
exocrine system | 7.19e-08 | 31 |
larynx | 2.13e-07 | 9 |
endocrine gland | 7.96e-07 | 35 |