FFCP PHASE1:Hg19::chr6:35480028..35480060,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7287 | |EntrezGene=7287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12423 | |HGNC=12423 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000448446_5end | |association_with_transcript=0bp_to_ENST00000448446_5end | ||
|cluster_id=chr6:35480028..35480060,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_TULP1_5end | |description=CAGE_peak_2_at_TULP1_5end | ||
|id=chr6:35480028..35480060,- | |id=chr6:35480028..35480060,- | ||
|ontology_enrichment_celltype=CL:0002586!4.45e-16!3;CL:0002322!5.04e-16!5;CL:0002504!5.07e-15!3;CL:1000279!5.07e-15!3;CL:1000280!5.07e-15!3;CL:0000149!3.50e-12!4;CL:0000147!7.78e-09!14;CL:0002603!1.39e-07!3 | |ontology_enrichment_celltype=CL:0002586!4.45e-16!3;CL:0002322!5.04e-16!5;CL:0002504!5.07e-15!3;CL:1000279!5.07e-15!3;CL:1000280!5.07e-15!3;CL:0000149!3.50e-12!4;CL:0000147!7.78e-09!14;CL:0002603!1.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;9.90e-07;4!CL:0002222;9.90e-07;4!CL:0002224;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.67e-30;3!UBERON:0006238;5.75e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.70e-08;11!DOID:5409;7.27e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.75e-08,11;DOID:5409,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000966!5.95e-26!5;UBERON:0005388!5.95e-26!5;UBERON:0001802!5.95e-26!5;UBERON:0000970!3.27e-19!20;UBERON:0002104!3.21e-18!21;UBERON:0000020!1.70e-16!23;UBERON:0001781!4.45e-16!3;UBERON:0001782!4.45e-16!3;UBERON:0005424!4.45e-16!3;UBERON:0007625!5.85e-16!11;UBERON:0000019!5.99e-16!19;UBERON:0000047!5.99e-16!19;UBERON:0004088!5.99e-16!19;UBERON:0003072!5.99e-16!19;UBERON:0003071!5.99e-16!19;UBERON:0004128!5.99e-16!19;UBERON:0001032!9.67e-16!24;UBERON:0004456!9.67e-16!24;UBERON:0003075!1.52e-14!86;UBERON:0007284!1.52e-14!86;UBERON:0001456!2.62e-14!21;UBERON:0002346!1.00e-13!90;UBERON:0001905!1.14e-11!2;UBERON:0002757!1.14e-11!2;UBERON:0010134!1.14e-11!2;UBERON:0002784!1.14e-11!2;UBERON:0005408!1.14e-11!2;UBERON:0001899!1.14e-11!2;UBERON:0002360!3.51e-11!2;UBERON:0000094!3.51e-11!2;UBERON:0007645!3.51e-11!2;UBERON:0005743!4.44e-11!86;UBERON:0000063!6.55e-11!97;UBERON:0005085!5.24e-10!29;UBERON:0000073!9.93e-10!94;UBERON:0001016!9.93e-10!94;UBERON:0003076!6.62e-08!15;UBERON:0003057!6.62e-08!15;UBERON:0003056!9.39e-08!61;UBERON:0000033!9.53e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.26e-45;2!UBERON:0002757;6.26e-45;2!UBERON:0010134;6.26e-45;2!UBERON:0005408;6.26e-45;2!UBERON:0001899;6.26e-45;2!UBERON:0003296;4.60e-23;4!UBERON:0010133;4.60e-23;4!UBERON:0002784;4.60e-23;4!UBERON:0000966;1.24e-18;5!UBERON:0005388;1.24e-18;5!UBERON:0001802;1.24e-18;5!UBERON:0000970;4.76e-18;20!UBERON:0002104;3.26e-17;21!UBERON:0000020;9.30e-16;23!UBERON:0001032;4.03e-15;24!UBERON:0004456;4.03e-15;24!UBERON:0001894;1.23e-13;7!UBERON:0002360;3.43e-12;2!UBERON:0000094;3.43e-12;2!UBERON:0010743;3.43e-12;2!UBERON:0000019;4.44e-11;19!UBERON:0000047;4.44e-11;19!UBERON:0004088;4.44e-11;19!UBERON:0010230;4.44e-11;19!UBERON:0001456;4.37e-10;21!UBERON:0010077;9.90e-07;4!UBERON:0005389;9.90e-07;4!UBERON:0000484;9.90e-07;4!UBERON:0000965;9.90e-07;4!UBERON:0001803;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.26e-45,2;UBERON:0002757,6.26e-45,2;UBERON:0010134,6.26e-45,2;UBERON:0005408,6.26e-45,2;UBERON:0001899,6.26e-45,2;UBERON:0003296,4.60e-23,4;UBERON:0010133,4.60e-23,4;UBERON:0002784,4.60e-23,4;UBERON:0000970,3.33e-17,21;UBERON:0002104,3.33e-17,21;UBERON:0000966,1.05e-15,6;UBERON:0005388,1.05e-15,6;UBERON:0001802,1.05e-15,6;UBERON:0000020,4.11e-15,24;UBERON:0001032,4.11e-15,24;UBERON:0004456,4.11e-15,24;UBERON:0001894,1.23e-13,7;UBERON:0006222,1.23e-13,7;UBERON:0002360,3.24e-12,2;UBERON:0000094,3.24e-12,2;UBERON:0010743,3.24e-12,2;UBERON:0000019,1.50e-10,20;UBERON:0000047,1.50e-10,20;UBERON:0010312,1.50e-10,20;UBERON:0004088,1.50e-10,20;UBERON:0010230,1.50e-10,20;UBERON:0003072,1.50e-10,20;UBERON:0004128,1.50e-10,20;UBERON:0003071,1.50e-10,20;UBERON:0001456,1.19e-09,22;UBERON:0003056,4.64e-09,61;UBERON:0005085,5.08e-07,31;UBERON:0003075,8.61e-07,82;UBERON:0007284,8.61e-07,82;UBERON:0001017,8.84e-07,81 | |||
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|short_description=p2@TULP1 | |short_description=p2@TULP1 | ||
}} | }} |
Latest revision as of 10:57, 18 September 2015
Short description: | p2@TULP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TULP1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000448446_5end |
EntrezGene: | TULP1 |
HGNC: | 12423 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 6.26e-45 | 2 |
regional part of epithalamus | 6.26e-45 | 2 |
secretory circumventricular organ | 6.26e-45 | 2 |
circumventricular organ | 6.26e-45 | 2 |
epithalamus | 6.26e-45 | 2 |
gland of diencephalon | 4.60e-23 | 4 |
neuroendocrine gland | 4.60e-23 | 4 |
regional part of diencephalon | 4.60e-23 | 4 |
eye | 3.33e-17 | 21 |
visual system | 3.33e-17 | 21 |
retina | 1.05e-15 | 6 |
photoreceptor array | 1.05e-15 | 6 |
posterior segment of eyeball | 1.05e-15 | 6 |
sense organ | 4.11e-15 | 24 |
sensory system | 4.11e-15 | 24 |
entire sense organ system | 4.11e-15 | 24 |
diencephalon | 1.23e-13 | 7 |
future diencephalon | 1.23e-13 | 7 |
meninx | 3.24e-12 | 2 |
membrane organ | 3.24e-12 | 2 |
meningeal cluster | 3.24e-12 | 2 |
camera-type eye | 1.50e-10 | 20 |
simple eye | 1.50e-10 | 20 |
immature eye | 1.50e-10 | 20 |
ocular region | 1.50e-10 | 20 |
eyeball of camera-type eye | 1.50e-10 | 20 |
optic cup | 1.50e-10 | 20 |
optic vesicle | 1.50e-10 | 20 |
eye primordium | 1.50e-10 | 20 |
face | 1.19e-09 | 22 |
pre-chordal neural plate | 4.64e-09 | 61 |
ectodermal placode | 5.08e-07 | 31 |
neural plate | 8.61e-07 | 82 |
presumptive neural plate | 8.61e-07 | 82 |
central nervous system | 8.84e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.75e-08 | 11 |
lung small cell carcinoma | 7.27e-07 | 4 |