FFCP PHASE1:Hg19::chr6:35480028..35480060,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7287 | |EntrezGene=7287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12423 | |HGNC=12423 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000448446_5end | |association_with_transcript=0bp_to_ENST00000448446_5end | ||
|cluster_id=chr6:35480028..35480060,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_TULP1_5end | |description=CAGE_peak_2_at_TULP1_5end | ||
|id=chr6:35480028..35480060,- | |id=chr6:35480028..35480060,- | ||
|ontology_enrichment_celltype=CL:0002586!4.45e-16!3;CL:0002322!5.04e-16!5;CL:0002504!5.07e-15!3;CL:1000279!5.07e-15!3;CL:1000280!5.07e-15!3;CL:0000149!3.50e-12!4;CL:0000147!7.78e-09!14;CL:0002603!1.39e-07!3 | |ontology_enrichment_celltype=CL:0002586!4.45e-16!3;CL:0002322!5.04e-16!5;CL:0002504!5.07e-15!3;CL:1000279!5.07e-15!3;CL:1000280!5.07e-15!3;CL:0000149!3.50e-12!4;CL:0000147!7.78e-09!14;CL:0002603!1.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;9.90e-07;4!CL:0002222;9.90e-07;4!CL:0002224;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.67e-30;3!UBERON:0006238;5.75e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;2.70e-08;11!DOID:5409;7.27e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.75e-08,11;DOID:5409,7.27e-07,4 | |||
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|short_description=p2@TULP1 | |short_description=p2@TULP1 | ||
}} | }} |
Latest revision as of 10:57, 18 September 2015
Short description: | p2@TULP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TULP1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000448446_5end |
EntrezGene: | TULP1 |
HGNC: | 12423 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 6.26e-45 | 2 |
regional part of epithalamus | 6.26e-45 | 2 |
secretory circumventricular organ | 6.26e-45 | 2 |
circumventricular organ | 6.26e-45 | 2 |
epithalamus | 6.26e-45 | 2 |
gland of diencephalon | 4.60e-23 | 4 |
neuroendocrine gland | 4.60e-23 | 4 |
regional part of diencephalon | 4.60e-23 | 4 |
eye | 3.33e-17 | 21 |
visual system | 3.33e-17 | 21 |
retina | 1.05e-15 | 6 |
photoreceptor array | 1.05e-15 | 6 |
posterior segment of eyeball | 1.05e-15 | 6 |
sense organ | 4.11e-15 | 24 |
sensory system | 4.11e-15 | 24 |
entire sense organ system | 4.11e-15 | 24 |
diencephalon | 1.23e-13 | 7 |
future diencephalon | 1.23e-13 | 7 |
meninx | 3.24e-12 | 2 |
membrane organ | 3.24e-12 | 2 |
meningeal cluster | 3.24e-12 | 2 |
camera-type eye | 1.50e-10 | 20 |
simple eye | 1.50e-10 | 20 |
immature eye | 1.50e-10 | 20 |
ocular region | 1.50e-10 | 20 |
eyeball of camera-type eye | 1.50e-10 | 20 |
optic cup | 1.50e-10 | 20 |
optic vesicle | 1.50e-10 | 20 |
eye primordium | 1.50e-10 | 20 |
face | 1.19e-09 | 22 |
pre-chordal neural plate | 4.64e-09 | 61 |
ectodermal placode | 5.08e-07 | 31 |
neural plate | 8.61e-07 | 82 |
presumptive neural plate | 8.61e-07 | 82 |
central nervous system | 8.84e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.75e-08 | 11 |
lung small cell carcinoma | 7.27e-07 | 4 |