FFCP PHASE1:Hg19::chr2:74753305..74753331,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=165545 | |EntrezGene=165545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20410 | |HGNC=20410 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TE96 | |UniProt=Q8TE96 | ||
|association_with_transcript=0bp_to_ENST00000393951,ENST00000498552_5end | |||
|cluster_id=chr2:74753305..74753331,- | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_2_at_DQX1_5end | |||
|id=chr2:74753305..74753331,- | |||
|ontology_enrichment_celltype=CL:0002076!8.38e-14!43;CL:0000223!9.46e-14!59;CL:0002251!5.69e-10!21;CL:0000066!4.19e-09!254;CL:0000244!4.80e-08!4;CL:0000731!4.80e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.39e-12;4!CL:0000731;1.39e-12;4!CL:0000182;1.38e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.39e-12,4;CL:0000731,1.39e-12,4;CL:0000182,1.42e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.70e-17;11!UBERON:0009497;7.51e-15;13!UBERON:0006242;8.64e-13;1 | |||
|ontology_enrichment_disease=DOID:1749!1.06e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;8.64e-13;1!DOID:3149;8.64e-13;1!DOID:3493;2.82e-07;2!DOID:3451;4.98e-07;2!DOID:4159;4.98e-07;2!DOID:0060122;4.98e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.73e-13,1;DOID:3149,9.73e-13,1;DOID:3493,2.74e-07,2;DOID:3451,5.28e-07,2;DOID:4159,5.28e-07,2;DOID:0060122,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.47e-16!169;UBERON:0000925!2.47e-16!169;UBERON:0006595!2.47e-16!169;UBERON:0001007!8.20e-12!155;UBERON:0001555!8.20e-12!155;UBERON:0007026!8.20e-12!155;UBERON:0000344!2.94e-11!12;UBERON:0005409!3.49e-10!35;UBERON:0000059!5.27e-10!11;UBERON:0003729!1.07e-09!5;UBERON:0000160!1.26e-09!27;UBERON:0004921!2.91e-09!129;UBERON:0004185!2.91e-09!129;UBERON:0001155!9.15e-09!9;UBERON:0003343!2.69e-07!4;UBERON:0004785!2.69e-07!4;UBERON:0000974!4.71e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.74e-23;17!UBERON:0002108;9.01e-22;4!UBERON:0005409;4.59e-18;22!UBERON:0001155;2.23e-12;9!UBERON:0004921;5.82e-11;33!UBERON:0000365;2.98e-10;5!UBERON:0000059;3.14e-10;11!UBERON:0005910;1.08e-08;6!UBERON:0002423;7.94e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.60e-23,17;UBERON:0002108,8.40e-22,4;UBERON:0005409,5.86e-16,25;UBERON:0001155,2.23e-12,9;UBERON:0004119,1.39e-10,160;UBERON:0000925,1.39e-10,160;UBERON:0006595,1.39e-10,160;UBERON:0000365,2.98e-10,5;UBERON:0000059,3.14e-10,11;UBERON:0005910,1.08e-08,6;UBERON:0009497,8.08e-08,25;UBERON:0000015,8.08e-08,25;UBERON:0002423,8.08e-08,25;UBERON:0006235,8.08e-08,25;UBERON:0004161,8.08e-08,25;UBERON:0004921,5.78e-07,118;UBERON:0001007,8.76e-07,145;UBERON:0001555,8.76e-07,145;UBERON:0007026,8.76e-07,145 | |||
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| ||
|short_description=p2@DQX1 | |||
}} | }} |
Latest revision as of 11:43, 18 September 2015
Short description: | p2@DQX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DQX1_5end |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | 0bp_to_ENST00000393951, ENST00000498552_5end |
EntrezGene: | DQX1 |
HGNC: | 20410 |
UniProt: | Q8TE96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.39e-12 | 4 |
urothelial cell | 1.39e-12 | 4 |
hepatocyte | 1.42e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.60e-23 | 17 |
small intestine | 8.40e-22 | 4 |
gastrointestinal system | 5.86e-16 | 25 |
colon | 2.23e-12 | 9 |
endoderm-derived structure | 1.39e-10 | 160 |
endoderm | 1.39e-10 | 160 |
presumptive endoderm | 1.39e-10 | 160 |
urothelium | 2.98e-10 | 5 |
large intestine | 3.14e-10 | 11 |
transitional epithelium | 1.08e-08 | 6 |
epithelium of foregut-midgut junction | 8.08e-08 | 25 |
anatomical boundary | 8.08e-08 | 25 |
hepatobiliary system | 8.08e-08 | 25 |
foregut-midgut junction | 8.08e-08 | 25 |
septum transversum | 8.08e-08 | 25 |
subdivision of digestive tract | 5.78e-07 | 118 |
digestive system | 8.76e-07 | 145 |
digestive tract | 8.76e-07 | 145 |
primitive gut | 8.76e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.73e-13 | 1 |
keratoacanthoma | 9.73e-13 | 1 |
signet ring cell adenocarcinoma | 2.74e-07 | 2 |
skin carcinoma | 5.28e-07 | 2 |
skin cancer | 5.28e-07 | 2 |
integumentary system cancer | 5.28e-07 | 2 |