FFCP PHASE1:Hg19::chr12:47473520..47473544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347902 | |EntrezGene=347902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24073 | |HGNC=24073 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HM7 | |UniProt=Q96HM7 | ||
|association_with_transcript=12bp_to_ENST00000321382_5end | |association_with_transcript=12bp_to_ENST00000321382_5end | ||
|cluster_id=chr12:47473520..47473544,- | |||
|coexpression_cluster_id=C893 | |||
|description=CAGE_peak_3_at_AMIGO2_5end | |description=CAGE_peak_3_at_AMIGO2_5end | ||
|id=chr12:47473520..47473544,- | |id=chr12:47473520..47473544,- | ||
|ontology_enrichment_celltype=CL:0000066!6.52e-11!254;CL:0002076!1.72e-07!43 | |ontology_enrichment_celltype=CL:0000066!6.52e-11!254;CL:0002076!1.72e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.64e-11,253;CL:0002076,4.63e-08,42;CL:0000223,7.07e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.62e-09!27;DOID:193!8.60e-09!29;DOID:2394!2.80e-07!14 | |ontology_enrichment_disease=DOID:120!1.62e-09!27;DOID:193!8.60e-09!29;DOID:2394!2.80e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:120;5.18e-11;27!DOID:193;2.35e-10;29!DOID:2394;4.91e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,5.06e-11,27;DOID:193,1.97e-10,29;DOID:2394,5.02e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.22e-09!365;UBERON:0003886!8.25e-08!63;UBERON:0003100!8.83e-08!41;UBERON:0002100!9.59e-08!216;UBERON:0000481!1.30e-07!347;UBERON:0003914!2.75e-07!118;UBERON:0004111!4.08e-07!241;UBERON:0000477!5.32e-07!286;UBERON:0000464!6.47e-07!104;UBERON:0003134!6.66e-07!37;UBERON:0000474!6.66e-07!37 | |ontology_enrichment_uberon=UBERON:0000475!1.22e-09!365;UBERON:0003886!8.25e-08!63;UBERON:0003100!8.83e-08!41;UBERON:0002100!9.59e-08!216;UBERON:0000481!1.30e-07!347;UBERON:0003914!2.75e-07!118;UBERON:0004111!4.08e-07!241;UBERON:0000477!5.32e-07!286;UBERON:0000464!6.47e-07!104;UBERON:0003134!6.66e-07!37;UBERON:0000474!6.66e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0003134;2.38e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,1.03e-07,41;UBERON:0002100,1.23e-07,199;UBERON:0003134,4.17e-07,37;UBERON:0000474,4.17e-07,37;UBERON:0003886,5.45e-07,54;UBERON:0003914,6.42e-07,117 | |||
|phase1_expression=0.908391896352783,0.642301571672949,2.25527046553554,4.00293193412522,0.446961094427288,0.872338524100369,7.59899634504932,0,0.783556884599516,0.982935746006035,2.79120467188971,0,0.263766978228454,0,0,4.03395087871065,3.61616716814386,1.46062018077475,0.975865597581014,0.984968464614303,1.63200552995402,0,0,0.136874425072884,1.00434111675842,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,3.614471025339,4.43704812200145,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,1.90810750907073,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.616804496998528,0,0.977766799900771,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0,0.493313713811028,0.276350017785848,0,0.296573126324121,0,0,0,0.383220493601921,0,0.253019692019503,3.82278497188916,1.95325036156926,0,1.50575119077773,1.53583933385302,2.49861453104692,0.947109008176067,4.10563998460523,1.20964045934839,0.534880391567015,0.434473211648397,0,3.35350429851818,0.383587685530591,0.361439152384566,0,0.434539556882471,0.795285947051099,2.43317435151318,0.472674085820339,2.4390233720882,2.28370442802128,0.392937226493138,1.09288586487763,1.11235332835329,0,0,0.132957960518865,1.19245312152671,0.571994910780128,2.22874500797739,0.79504962946682,0.860234595106124,0.347140501607594,2.82653970962005,1.67799774483962,0,0.626984899610432,0.516833518338658,1.06729878806013,0,0.402829317109147,0,0,1.47065232138347,0,0.357198913136319,0.44905874525234,0.112611480483322,1.53316637465883,0,0,0,0,1.74437620857014,1.49091585508596,2.02608818663328,1.32409180813219,2.58152958673932,2.12801029319014,1.68203280042692,6.4049397437823,12.5800449692752,0.311211035399766,2.15537075311501,1.79808093424805,0.605429710579726,1.72852777344,0,0,1.71141546463335,0,0,0.161872944368132,0,0,0.122834317311768,0,5.94001428641027,0.989067717114227,0,0,0.168336113954066,0.250237039743928,0,1.75591048352335,4.29082914118628,1.95309476578576,3.06266894532057,3.40840307808838,2.13557388818567,2.11931901159562,4.50136644126603,1.8549455262919,8.24449728146013,5.3973888336161,0.675105328965065,2.82567314967476,0.757301322732344,3.77404584433427,1.13152239773168,2.84007674013291,2.92181084860157,0.847802961552438,6.95739071387869,6.00041465299836,5.73609190778008,0.121973706129595,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0,0.828147600278907,1.01150814046861,0.964044119533928,1.7647035637183,1.30727666455444,0.71181185733329,0.539325232640658,0.588664395376038,2.30848294167834,0,1.40241773803446,0.8231480226628,0,0,1.96565443335525,1.18157981336281,0,0,1.54411029268673,2.41450627898976,1.1240175325762,1.70899253099772,2.87024179991442,0,0,4.3299402607582,0.115930404975077,5.9878434060269,0.144366447761074,0,0,14.223679163267,7.72637545885385,0,0,0.148631162288728,2.81201501960331,21.3337302812552,6.80520466763455,6.80644772541647,2.3250715081117,2.68367875415648,0,0,1.86595303986695,1.8735593944205,2.27236380167484,0,0,0,0,0,0,0,0.112131084345361,2.1798003441664,1.24675085895615,28.4397774667111,0,0,6.91439103120663,5.2003718455683,0,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,1.58390374586686,4.82303003295338,8.71533458600294,6.69819040919782,0,0,0,16.5341150289192,2.29723871668228,5.70547620162874,1.73737568001095,0.205476322550383,1.07436577943937,0.448340575974109,0.197030760201927,1.50939302401662,0.256686072559497,2.28685161800217,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,0.892144943985809,0.315404830067869,0.468565659970853,2.10662269809403,15.9185252839189,0,7.97070718242524,8.11224341583494,0.521301686808497,0.391602314925481,1.37257369524342,0.413536052245775,0,0.533637789017222,0,0,0.30239029332968,1.48864684691266,3.22270143904931,1.12264037773229,1.40953064181271,7.67560873600055,6.75586468803151,2.96836132889982,0.308419387605311,0,0,1.03850885836724,0,0.604297247958111,18.4465952679022,2.30202472339741,1.49258782613989,1.27463817604702,0.917870904715969,6.76799419361118,12.9385766335417,6.27479815341484,5.84556898613043,8.86633682700156,0,0.170093705276516,4.53423423814493,1.54227252690289,6.23176806350862,8.02703638167765,0.509752546090077,1.66215201785745,4.02974558499921,0,0,0,0.328014645699706,7.48370307727897,0.721287081534056,0.366277859273374,0.165018999841176,3.44559322797703,1.95018073810956,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.356128142586949,4.79326254546837,18.8346266017804,5.6149593497617,0.6069466851333,0.464845549297286,5.03699754929024,2.0911118104818,2.7723022215848,1.59691809095107,1.73986598415015,1.48259375283136,11.1637411658753,2.232950216158,4.11293252134344,2.09693213316207,0,0.4279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|phase1_expression=0.908391896352783,0.642301571672949,2.25527046553554,4.00293193412522,0.446961094427288,0.872338524100369,7.59899634504932,0,0.783556884599516,0.982935746006035,2.79120467188971,0,0.263766978228454,0,0,4.03395087871065,3.61616716814386,1.46062018077475,0.975865597581014,0.984968464614303,1.63200552995402,0,0,0.136874425072884,1.00434111675842,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,3.614471025339,4.43704812200145,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,1.90810750907073,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.616804496998528,0,0.977766799900771,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0,0.493313713811028,0.276350017785848,0,0.296573126324121,0,0,0,0.383220493601921,0,0.253019692019503,3.82278497188916,1.95325036156926,0,1.50575119077773,1.53583933385302,2.49861453104692,0.947109008176067,4.10563998460523,1.20964045934839,0.534880391567015,0.434473211648397,0,3.35350429851818,0.383587685530591,0.361439152384566,0,0.434539556882471,0.795285947051099,2.43317435151318,0.472674085820339,2.4390233720882,2.28370442802128,0.392937226493138,1.09288586487763,1.11235332835329,0,0,0.132957960518865,1.19245312152671,0.571994910780128,2.22874500797739,0.79504962946682,0.860234595106124,0.347140501607594,2.82653970962005,1.67799774483962,0,0.626984899610432,0.516833518338658,1.06729878806013,0,0.402829317109147,0,0,1.47065232138347,0,0.357198913136319,0.44905874525234,0.112611480483322,1.53316637465883,0,0,0,0,1.74437620857014,1.49091585508596,2.02608818663328,1.32409180813219,2.58152958673932,2.12801029319014,1.68203280042692,6.4049397437823,12.5800449692752,0.311211035399766,2.15537075311501,1.79808093424805,0.605429710579726,1.72852777344,0,0,1.71141546463335,0,0,0.161872944368132,0,0,0.122834317311768,0,5.94001428641027,0.989067717114227,0,0,0.168336113954066,0.250237039743928,0,1.75591048352335,4.29082914118628,1.95309476578576,3.06266894532057,3.40840307808838,2.13557388818567,2.11931901159562,4.50136644126603,1.8549455262919,8.24449728146013,5.3973888336161,0.675105328965065,2.82567314967476,0.757301322732344,3.77404584433427,1.13152239773168,2.84007674013291,2.92181084860157,0.847802961552438,6.95739071387869,6.00041465299836,5.73609190778008,0.121973706129595,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0,0.828147600278907,1.01150814046861,0.964044119533928,1.7647035637183,1.30727666455444,0.71181185733329,0.539325232640658,0.588664395376038,2.30848294167834,0,1.40241773803446,0.8231480226628,0,0,1.96565443335525,1.18157981336281,0,0,1.54411029268673,2.41450627898976,1.1240175325762,1.70899253099772,2.87024179991442,0,0,4.3299402607582,0.115930404975077,5.9878434060269,0.144366447761074,0,0,14.223679163267,7.72637545885385,0,0,0.148631162288728,2.81201501960331,21.3337302812552,6.80520466763455,6.80644772541647,2.3250715081117,2.68367875415648,0,0,1.86595303986695,1.8735593944205,2.27236380167484,0,0,0,0,0,0,0,0.112131084345361,2.1798003441664,1.24675085895615,28.4397774667111,0,0,6.91439103120663,5.2003718455683,0,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,1.58390374586686,4.82303003295338,8.71533458600294,6.69819040919782,0,0,0,16.5341150289192,2.29723871668228,5.70547620162874,1.73737568001095,0.205476322550383,1.07436577943937,0.448340575974109,0.197030760201927,1.50939302401662,0.256686072559497,2.28685161800217,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,0.892144943985809,0.315404830067869,0.468565659970853,2.10662269809403,15.9185252839189,0,7.97070718242524,8.11224341583494,0.521301686808497,0.391602314925481,1.37257369524342,0.413536052245775,0,0.533637789017222,0,0,0.30239029332968,1.48864684691266,3.22270143904931,1.12264037773229,1.40953064181271,7.67560873600055,6.75586468803151,2.96836132889982,0.308419387605311,0,0,1.03850885836724,0,0.604297247958111,18.4465952679022,2.30202472339741,1.49258782613989,1.27463817604702,0.917870904715969,6.76799419361118,12.9385766335417,6.27479815341484,5.84556898613043,8.86633682700156,0,0.170093705276516,4.53423423814493,1.54227252690289,6.23176806350862,8.02703638167765,0.509752546090077,1.66215201785745,4.02974558499921,0,0,0,0.328014645699706,7.48370307727897,0.721287081534056,0.366277859273374,0.165018999841176,3.44559322797703,1.95018073810956,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.356128142586949,4.79326254546837,18.8346266017804,5.6149593497617,0.6069466851333,0.464845549297286,5.03699754929024,2.0911118104818,2.7723022215848,1.59691809095107,1.73986598415015,1.48259375283136,11.1637411658753,2.232950216158,4.11293252134344,2.09693213316207,0,0.4279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| ||
|short_description=p3@AMIGO2 | |short_description=p3@AMIGO2 | ||
}} | }} |
Latest revision as of 12:11, 18 September 2015
Short description: | p3@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AMIGO2_5end |
Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
Association with transcript: | 12bp_to_ENST00000321382_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | Q96HM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.64e-11 | 253 |
endo-epithelial cell | 4.63e-08 | 42 |
endodermal cell | 7.07e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
female organism | 1.03e-07 | 41 |
trunk | 1.23e-07 | 199 |
female reproductive organ | 4.17e-07 | 37 |
female reproductive system | 4.17e-07 | 37 |
body cavity precursor | 5.45e-07 | 54 |
epithelial tube | 6.42e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 5.06e-11 | 27 |
reproductive organ cancer | 1.97e-10 | 29 |
ovarian cancer | 5.02e-09 | 14 |