FFCP PHASE1:Hg19::chr12:47473557..47473568,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:47473557..47473568,-
|short_description=p8@AMIGO2
|description=CAGE_peak_8_at_AMIGO2_5end
|association_with_transcript=0bp_to_ENST00000321382_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=347902 | |EntrezGene=347902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24073 | |HGNC=24073 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HM7 | |UniProt=Q96HM7 | ||
|association_with_transcript=0bp_to_ENST00000321382_5end | |||
|cluster_id=chr12:47473557..47473568,- | |||
|coexpression_cluster_id=C893 | |||
|description=CAGE_peak_8_at_AMIGO2_5end | |||
|id=chr12:47473557..47473568,- | |||
|ontology_enrichment_celltype=CL:0000066!3.71e-09!254;CL:0002076!3.20e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.32e-08;4!CL:0000731;2.32e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.81e-09,253;CL:0000244,2.72e-08,4;CL:0000731,2.72e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.14e-09!27;DOID:193!2.67e-08!29;DOID:2394!7.48e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.77e-14;14!DOID:120;2.70e-10;27!DOID:193;2.50e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.69e-14,14;DOID:120,1.71e-10,27;DOID:193,1.64e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000464!3.36e-07!104;UBERON:0003886!3.42e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;5.89e-10;13!UBERON:0000365;1.43e-09;5!UBERON:0000486;1.70e-08;12!UBERON:0005910;7.06e-08;6!UBERON:0002323;7.73e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,2.31e-10,54;UBERON:0000992,5.25e-10,13;UBERON:0000365,1.04e-09,5;UBERON:0002323,2.44e-09,46;UBERON:0002553,1.67e-08,61;UBERON:0004458,1.84e-08,49;UBERON:0005910,5.43e-08,6 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0.802622484269139,1.04535523804977,0,0.766440987203842,0.34362744548263,0,0.95569624297229,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0.604820229674197,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0.327447688744282,0,0.370784442784429,0,0,0,0.476981248610684,1.14398982156026,0.74291500265913,0,0,0,0,0.419499436209906,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0.22452937262617,0.112611480483322,0,0,0,0,3.87780264148325,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,2.96001058100592,0.311211035399766,0.134710672069688,0.653847612453835,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.919463387397059,0,0.567160915800105,0,0.213557388818567,0.211931901159562,0.900273288253207,0.618315175430633,1.03056216018252,0.37223371266318,0,0.779496041289589,0,0.828449087780694,0.323292113637624,0.355009592516614,0.806016785821122,0.847802961552438,1.15956511897978,1.09098448236334,2.29443676311203,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.439001141634502,1.1240175325762,0.603173834469785,0.648119116109707,0,0,1.44331342025273,0.115930404975077,2.11335649624479,0,0,0,0.790204397959275,2.57545848628462,0,0,0,1.87467667973554,3.86358894857377,1.13420077793909,1.07470227243418,1.16253575405585,0.766765358330422,0,0,0.414656231081544,0.576479813667846,0.6312121671319,0,0,0,0,0.102827492703324,0,0,0.112131084345361,1.30788020649984,0.36669142910475,5.17086863031111,0,0,2.12750493267896,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0.791951872933429,1.80863626235752,1.74306691720059,1.59956785891291,0,0,0,2.87549826589899,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0.224170287987055,0.197030760201927,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,2.65690239414175,1.29058417979192,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0.61384789315225,0.561320188866147,0.256278298511402,2.04682899626681,2.2519548960105,0,0.308419387605311,0.177561725313127,0,0,0,0.120859449591622,3.60911646545913,0.276242966807689,0.114814448164607,0.728364672026868,0.393373244878272,0.902399225814824,2.92658280996776,0,1.46139224653261,1.26661954671451,0,0,1.94324324491925,0,3.25135725052623,1.50506932156456,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,1.62689197332152,0.309123034943167,0,0.082509499920588,0.574265537996172,0.650060246036521,1.6068392984416,0.193341436584244,0,0.15350367472613,0.275673144969061,0,0,0,0.178064071293475,0.661139661443912,3.0750410778417,1.27612712494584,0.4046311234222,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,1.86062352764589,0.744316738719335,0.632758849437452,0,0,0,0,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0.421258456238981,0,2.19342140668156,3.16950440270266,0.9554993798559,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,1.62328301570163,1.239293992399,1.12678241012897,1.43411352204052,0.88424136911809,0.35667105148125,0.354761064070598,0,0,0,0,0.384888450902048,1.34060455107157,3.26672954583968,0.0941438007767792,4.73555909938353,3.36942951335251,1.33029046061003,7.12142540641574,0,0,0.569647187174163,0,0,0.648473311192717,0,1.58625035258854,2.02965735142199,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.667852230137435,0,0,0.597743964753209,0,0.503865495708552,1.02268682502155,0,0,2.24670877868317,1.25314822272926,0,0.690503839458535,0,0,0,0,0,2.3438498497671,0,0,1.365521379426,1.01701460117107,0.472775363535873,0.344743373241465,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0.139423744278603,0.384751292518985,0.91153644677601,0,0.0897576444097721,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,1.89898258075224,3.59112177950125,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0,0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| ||
|short_description=p8@AMIGO2 | |||
}} | }} |
Latest revision as of 12:11, 18 September 2015
Short description: | p8@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_AMIGO2_5end |
Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
Association with transcript: | 0bp_to_ENST00000321382_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | Q96HM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.81e-09 | 253 |
transitional epithelial cell | 2.72e-08 | 4 |
urothelial cell | 2.72e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 2.31e-10 | 54 |
female gonad | 5.25e-10 | 13 |
urothelium | 1.04e-09 | 5 |
body cavity | 2.44e-09 | 46 |
anatomical cavity | 1.67e-08 | 61 |
body cavity or lining | 1.84e-08 | 49 |
transitional epithelium | 5.43e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.69e-14 | 14 |
female reproductive organ cancer | 1.71e-10 | 27 |
reproductive organ cancer | 1.64e-09 | 29 |