FFCP PHASE1:Hg19::chr12:47474192..47474251,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347902 | |EntrezGene=347902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24073 | |HGNC=24073 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SJ2 | |UniProt=Q86SJ2 | ||
|association_with_transcript=-458bp_to_ENST00000429635,NM_001143668,NM_181847,uc001rpk.2,uc001rpl.2,uc001rpm.2_5end | |association_with_transcript=-458bp_to_ENST00000429635,NM_001143668,NM_181847,uc001rpk.2,uc001rpl.2,uc001rpm.2_5end | ||
|cluster_id=chr12:47474192..47474251,- | |||
|coexpression_cluster_id=C893 | |||
|description=CAGE_peak_4_at_AMIGO2_5end | |description=CAGE_peak_4_at_AMIGO2_5end | ||
|id=chr12:47474192..47474251,- | |id=chr12:47474192..47474251,- | ||
|ontology_enrichment_celltype=CL:0000066!6.87e-11!254;CL:0002076!5.22e-09!43;CL:0000076!2.26e-07!62 | |ontology_enrichment_celltype=CL:0000066!6.87e-11!254;CL:0002076!5.22e-09!43;CL:0000076!2.26e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.32e-08;42!CL:0002368;3.54e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.27e-14,253;CL:0002076,4.65e-11,42;CL:0000223,1.07e-07,58;CL:0002368,2.90e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!4.22e-08!27;DOID:193!6.39e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:120;1.14e-08;27!DOID:193;1.52e-07;29!DOID:2394;4.92e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.63e-08,27;DOID:193,2.09e-07,29;DOID:2394,6.63e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!7.52e-09!118;UBERON:0003886!1.15e-07!63;UBERON:0000464!1.54e-07!104;UBERON:0002100!2.12e-07!216;UBERON:0003100!9.84e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.42e-08,199;UBERON:0003914,1.79e-08,117;UBERON:0003886,1.78e-07,54;UBERON:0009569,3.87e-07,112;UBERON:0000915,4.61e-07,52;UBERON:0005157,5.05e-07,47;UBERON:0005911,7.45e-07,82 | |||
|phase1_expression=0.726713517082227,1.71280419112787,1.9733616573436,0,2.68176656656373,0.872338524100369,5.06599756336621,0,0.522371256399677,2.94880723801811,6.28021051175185,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0.61560529038394,0.408001382488506,0,0.572471974262113,0.273748850145768,0.753255837568817,0,0,0,0,0.767658796194425,0.77408061658038,9.19421224478927,9.0361775633475,5.9160641626686,0,0,0,1.10799081706375,0.601633342410425,0.217010870715852,0.223915474239924,0.32389366601898,0,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0,1.41889337933151,1.37898272294647,0.645484683583826,1.35426486594342,0.188242339542605,0,0.224723484445085,0.918251677112708,0,0,0.659702600373432,0.997318288108159,0,0.870627715885752,0,1.86846674698672,0.251248665256743,0,0.434377689410233,3.02699751316684,0,0.949387162322653,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,1.20118796110804,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0,2.360517241366,1.96505381374582,1.85041349099558,0.334372990781356,1.95553359980154,0,0,0.445641827540694,0.589211814949674,0.221533894583621,0.541607727530031,0.128091319725675,0,0.164437904603676,0,0.579606171470105,2.37258501059297,1.87278579662799,2.09071047609954,0,1.91610246800961,0.68725489096526,0.506039384039006,2.54852331459277,1.30216690771284,0,1.95747654801105,1.02389288923535,0,2.60454977248419,1.64225599384209,2.21767417547206,1.60464117470104,2.02754165435919,0,9.38981203585091,0.12786256184353,0,0.50133791063589,1.44846518960824,0.795285947051099,0.973269740605272,1.32348744029695,3.54767035940102,1.40535657109002,2.16115474571226,1.45718115317017,1.48313777113772,0.324547393654683,0.696518949197069,0.531831842075461,0.238490624305342,0.571994910780128,0.371457501329565,0.39752481473341,0,1.73570250803797,5.6530794192401,3.77549492588915,1.37559020970034,0.417989933073621,1.55050055501597,1.06729878806013,1.33888245105868,0.402829317109147,0,0.732186172644509,1.10298924103761,2.43042584364528,0.892997282840798,0.44905874525234,1.23872628531654,0,0.949265659568129,1.46561395144326,0,0,3.05265836499774,1.98788780678127,2.65924074495618,0.926864265692532,0.573673241497627,1.06400514659507,3.92474320099615,8.5399196583764,12.333377420858,0.622422070799533,1.0776853765575,1.47115712802113,0.454072282934794,0,0,0,1.1409436430889,0,0,0,0,0,0,0,2.37600571456411,1.97813543422845,0,0,0,0,0,0,2.45190236639216,0.751190294532984,4.8775838758809,2.51145489964407,0.85422955527427,1.05965950579781,1.20036438433761,0.721367704669072,7.47157566132325,3.16398655763703,0.843881661206331,1.94874010322397,1.00973509697646,0.736399189138395,0.161646056818812,2.13005755509969,2.82105875037393,1.3564847384839,10.0495643644914,8.72787585890671,6.59650569394709,0,0,0.69716365721711,0.414644220061482,0.252320850875628,0,0,0.643240938192885,5.52539685409922,0.464367928031979,0,0.354920400119532,0.674338760312407,0,0.220587945464788,0.435758888184812,0.237270619111097,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.122988438543114,1.3725424823882,9.10927368891592,3.37205259772859,2.51322431029077,4.53683381276795,0,0,5.77325368101093,0.115930404975077,1.05667824812239,0,0,0,6.3216351836742,4.29243081047436,0.492434012174795,0.234004265139238,0,6.56136837907439,18.9819804864711,8.79005602902796,8.14982556595919,6.39394664730716,9.58456697913028,0,0,1.86595303986695,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,1.34557301214433,2.61576041299968,2.4935017179123,7.88557466122444,0,0,3.19125739901845,2.08014873822732,0.514414748524284,1.41849132023278,0,0.57191197463259,0,0,0.977208552881205,0.710783897485092,0.791951872933429,2.41151501647669,7.84380112740265,5.69846049737725,0,0,0,14.1378664740034,1.14861935834114,1.42636905040718,1.15825045334063,1.02738161275192,1.79060963239896,0,1.77327684181734,1.07813787429759,0.77005821767849,0.76228387266739,0,0,0.335032530668698,0,0,2.99161459204025,0,0,0.500170521059677,0,0.415941723061614,0.535286966391485,0.157702415033935,0.35142424497814,0.601892199455438,0,2.0694614258501,4.64957918974806,3.50301420229236,0.60818530127658,0.195801157462741,0,1.03384013061444,0,1.81436848265855,0,0,0.30239029332968,2.97729369382532,2.30192959932094,1.12264037773229,0.640695746278505,4.60536524160033,6.27330292460069,0,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0.120859449591622,22.8577376145745,3.49907757956406,1.14814448164607,0.910455840033585,0.786746489756545,3.60959690325929,10.7821471946181,1.56869953835371,4.38417673959782,11.1884726626448,0,0.680374821106063,4.53423423814493,3.08454505380579,1.89662506280697,1.50506932156456,1.01950509218015,0.831076008928724,3.58199607555485,0,0,0.256450125116389,0.328014645699706,7.15832468261467,2.36994326789761,1.09883357782012,0.577566499444116,13.208107373912,15.6014459048765,0,0.290012154876366,0,0,0.137836572484531,0,0.145016693914229,0.1704532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|phase1_expression=0.726713517082227,1.71280419112787,1.9733616573436,0,2.68176656656373,0.872338524100369,5.06599756336621,0,0.522371256399677,2.94880723801811,6.28021051175185,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0.61560529038394,0.408001382488506,0,0.572471974262113,0.273748850145768,0.753255837568817,0,0,0,0,0.767658796194425,0.77408061658038,9.19421224478927,9.0361775633475,5.9160641626686,0,0,0,1.10799081706375,0.601633342410425,0.217010870715852,0.223915474239924,0.32389366601898,0,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0,1.41889337933151,1.37898272294647,0.645484683583826,1.35426486594342,0.188242339542605,0,0.224723484445085,0.918251677112708,0,0,0.659702600373432,0.997318288108159,0,0.870627715885752,0,1.86846674698672,0.251248665256743,0,0.434377689410233,3.02699751316684,0,0.949387162322653,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,1.20118796110804,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0,2.360517241366,1.96505381374582,1.85041349099558,0.334372990781356,1.95553359980154,0,0,0.445641827540694,0.589211814949674,0.221533894583621,0.541607727530031,0.128091319725675,0,0.164437904603676,0,0.579606171470105,2.37258501059297,1.87278579662799,2.09071047609954,0,1.91610246800961,0.68725489096526,0.506039384039006,2.54852331459277,1.30216690771284,0,1.95747654801105,1.02389288923535,0,2.60454977248419,1.64225599384209,2.21767417547206,1.60464117470104,2.02754165435919,0,9.38981203585091,0.12786256184353,0,0.50133791063589,1.44846518960824,0.795285947051099,0.973269740605272,1.32348744029695,3.54767035940102,1.40535657109002,2.16115474571226,1.45718115317017,1.48313777113772,0.324547393654683,0.696518949197069,0.531831842075461,0.238490624305342,0.571994910780128,0.371457501329565,0.39752481473341,0,1.73570250803797,5.6530794192401,3.77549492588915,1.37559020970034,0.417989933073621,1.55050055501597,1.06729878806013,1.33888245105868,0.402829317109147,0,0.732186172644509,1.10298924103761,2.43042584364528,0.892997282840798,0.44905874525234,1.23872628531654,0,0.949265659568129,1.46561395144326,0,0,3.05265836499774,1.98788780678127,2.65924074495618,0.926864265692532,0.573673241497627,1.06400514659507,3.92474320099615,8.5399196583764,12.333377420858,0.622422070799533,1.0776853765575,1.47115712802113,0.454072282934794,0,0,0,1.1409436430889,0,0,0,0,0,0,0,2.37600571456411,1.97813543422845,0,0,0,0,0,0,2.45190236639216,0.751190294532984,4.8775838758809,2.51145489964407,0.85422955527427,1.05965950579781,1.20036438433761,0.721367704669072,7.47157566132325,3.16398655763703,0.843881661206331,1.94874010322397,1.00973509697646,0.736399189138395,0.161646056818812,2.13005755509969,2.82105875037393,1.3564847384839,10.0495643644914,8.72787585890671,6.59650569394709,0,0,0.69716365721711,0.414644220061482,0.252320850875628,0,0,0.643240938192885,5.52539685409922,0.464367928031979,0,0.354920400119532,0.674338760312407,0,0.220587945464788,0.435758888184812,0.237270619111097,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.122988438543114,1.3725424823882,9.10927368891592,3.37205259772859,2.51322431029077,4.53683381276795,0,0,5.77325368101093,0.115930404975077,1.05667824812239,0,0,0,6.3216351836742,4.29243081047436,0.492434012174795,0.234004265139238,0,6.56136837907439,18.9819804864711,8.79005602902796,8.14982556595919,6.39394664730716,9.58456697913028,0,0,1.86595303986695,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,1.34557301214433,2.61576041299968,2.4935017179123,7.88557466122444,0,0,3.19125739901845,2.08014873822732,0.514414748524284,1.41849132023278,0,0.57191197463259,0,0,0.977208552881205,0.710783897485092,0.791951872933429,2.41151501647669,7.84380112740265,5.69846049737725,0,0,0,14.1378664740034,1.14861935834114,1.42636905040718,1.15825045334063,1.02738161275192,1.79060963239896,0,1.77327684181734,1.07813787429759,0.77005821767849,0.76228387266739,0,0,0.335032530668698,0,0,2.99161459204025,0,0,0.500170521059677,0,0.415941723061614,0.535286966391485,0.157702415033935,0.35142424497814,0.601892199455438,0,2.0694614258501,4.64957918974806,3.50301420229236,0.60818530127658,0.195801157462741,0,1.03384013061444,0,1.81436848265855,0,0,0.30239029332968,2.97729369382532,2.30192959932094,1.12264037773229,0.640695746278505,4.60536524160033,6.27330292460069,0,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0.120859449591622,22.8577376145745,3.49907757956406,1.14814448164607,0.910455840033585,0.786746489756545,3.60959690325929,10.7821471946181,1.56869953835371,4.38417673959782,11.1884726626448,0,0.680374821106063,4.53423423814493,3.08454505380579,1.89662506280697,1.50506932156456,1.01950509218015,0.831076008928724,3.58199607555485,0,0,0.256450125116389,0.328014645699706,7.15832468261467,2.36994326789761,1.09883357782012,0.577566499444116,13.208107373912,15.6014459048765,0,0.290012154876366,0,0,0.137836572484531,0,0.145016693914229,0.1704532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| ||
|short_description=p4@AMIGO2 | |short_description=p4@AMIGO2 | ||
}} | }} |
Latest revision as of 12:17, 18 September 2015
Short description: | p4@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AMIGO2_5end |
Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
Association with transcript: | -458bp_to_ENST00000429635, NM_001143668, NM_181847, uc001rpk.2, uc001rpl.2, uc001rpm.2_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | Q86SJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.27e-14 | 253 |
endo-epithelial cell | 4.65e-11 | 42 |
endodermal cell | 1.07e-07 | 58 |
respiratory epithelial cell | 2.90e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.42e-08 | 199 |
epithelial tube | 1.79e-08 | 117 |
body cavity precursor | 1.78e-07 | 54 |
subdivision of trunk | 3.87e-07 | 112 |
thoracic segment of trunk | 4.61e-07 | 52 |
epithelial fold | 5.05e-07 | 47 |
endo-epithelium | 7.45e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.63e-08 | 27 |
reproductive organ cancer | 2.09e-07 | 29 |
ovarian cancer | 6.63e-07 | 14 |