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FFCP PHASE1:Hg19::chr4:74274428..74274489,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=213
|EntrezGene=213
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=399
|HGNC=399
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=73bp_to_ENST00000505649_5end
|association_with_transcript=73bp_to_ENST00000505649_5end
|cluster_id=chr4:74274428..74274489,+
|coexpression_cluster_id=C5
|coexpression_cluster_id=C5
|description=CAGE_peak_3_at_ALB_5end
|description=CAGE_peak_3_at_ALB_5end
|id=chr4:74274428..74274489,+
|id=chr4:74274428..74274489,+
|ontology_enrichment_celltype=CL:0000181!2.41e-28!12;CL:0000417!2.41e-28!12;CL:0000668!2.41e-28!12;CL:0000414!2.41e-28!12;CL:0000412!2.41e-28!12;CL:0000182!2.41e-28!12;CL:0000223!2.51e-08!59
|ontology_enrichment_celltype=CL:0000181!2.41e-28!12;CL:0000417!2.41e-28!12;CL:0000668!2.41e-28!12;CL:0000414!2.41e-28!12;CL:0000412!2.41e-28!12;CL:0000182!2.41e-28!12;CL:0000223!2.51e-08!59
|ontology_enrichment_celltype_v019=CL:0000182;1.39e-39;12
|ontology_enrichment_celltype_v019_2=CL:0000182,1.39e-39,12;CL:0000223,7.15e-14,58
|ontology_enrichment_development_v019=UBERON:0004161;2.66e-30;11!UBERON:0009497;1.16e-25;13!UBERON:0001041;3.91e-11;30!UBERON:0003104;9.21e-11;31!CL:0000223;9.53e-11;58
|ontology_enrichment_disease=DOID:114!8.41e-15!2;DOID:178!3.57e-08!1;DOID:326!3.57e-08!1;DOID:3978!3.57e-08!1;DOID:3394!3.57e-08!1;DOID:5844!3.57e-08!1;DOID:1287!7.70e-08!4
|ontology_enrichment_disease=DOID:114!8.41e-15!2;DOID:178!3.57e-08!1;DOID:326!3.57e-08!1;DOID:3978!3.57e-08!1;DOID:3394!3.57e-08!1;DOID:5844!3.57e-08!1;DOID:1287!7.70e-08!4
|ontology_enrichment_disease_v019=DOID:114;8.89e-08;2
|ontology_enrichment_disease_v019_2=DOID:114,8.60e-08,2
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|ontology_enrichment_uberon=UBERON:0002107!3.67e-29!19;UBERON:0006925!3.67e-29!19;UBERON:0008836!3.67e-29!19;UBERON:0005057!1.18e-25!26;UBERON:0008835!5.40e-25!22;UBERON:0003894!5.40e-25!22;UBERON:0009854!7.59e-24!23;UBERON:0007499!7.97e-22!25;UBERON:0009497!7.97e-22!25;UBERON:0000015!7.97e-22!25;UBERON:0002423!7.97e-22!25;UBERON:0006235!7.97e-22!25;UBERON:0004161!7.97e-22!25;UBERON:0009856!6.24e-21!26;UBERON:0005172!4.88e-19!55;UBERON:0005173!4.88e-19!55;UBERON:0002365!2.52e-17!31;UBERON:0002330!2.52e-17!31;UBERON:0002417!6.36e-17!61;UBERON:0000916!6.36e-17!61;UBERON:0002368!3.52e-15!35;UBERON:0000949!3.42e-14!45;UBERON:0003929!5.24e-14!54;UBERON:0005177!1.69e-13!107;UBERON:0002530!2.11e-10!59;UBERON:0009569!2.18e-09!113;UBERON:0005911!1.50e-08!82;UBERON:0001301!2.89e-08!1;UBERON:0002146!3.33e-08!1;UBERON:0005623!3.33e-08!1;UBERON:0000989!3.83e-08!1;UBERON:0008811!3.83e-08!1;UBERON:0006258!3.83e-08!1;UBERON:0005876!3.83e-08!1;UBERON:0004874!3.83e-08!1;UBERON:0001041!3.85e-08!98;UBERON:0004921!6.51e-08!129;UBERON:0004185!6.51e-08!129;UBERON:0000466!5.54e-07!126;UBERON:0002100!6.73e-07!216
|ontology_enrichment_uberon_v019=UBERON:0002107;3.26e-44;19!UBERON:0006925;3.26e-44;19!UBERON:0002423;1.81e-33;25!UBERON:0002365;7.25e-26;31!UBERON:0002330;7.25e-26;31!UBERON:0002368;8.24e-23;33!UBERON:0000949;5.65e-20;43!UBERON:0002530;2.86e-11;57!UBERON:0005172;4.92e-10;52!UBERON:0005173;4.92e-10;52!UBERON:0002417;8.04e-09;58!UBERON:0000916;8.04e-09;58!UBERON:0001007;4.62e-08;81
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|short_description=p3@ALB
|short_description=p3@ALB
}}
}}

Latest revision as of 12:39, 18 September 2015

Short description:p3@ALB
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_ALB_5end
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: 73bp_to_ENST00000505649_5end
EntrezGene:ALB
HGNC: 399
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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