FFCP PHASE1:Hg19::chr4:74283826..74283880,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:74283826..74283880,+
|short_description=p12@ALB
|description=CAGE_peak_12_at_ALB_5end
|association_with_transcript=103bp_to_ENST00000486939_5end
|EntrezGe...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=103bp_to_ENST00000486939_5end | |||
|cluster_id=chr4:74283826..74283880,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_ALB_5end | |||
|id=chr4:74283826..74283880,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.49e-31!12;CL:0000417!1.49e-31!12;CL:0000668!1.49e-31!12;CL:0000414!1.49e-31!12;CL:0000412!1.49e-31!12;CL:0000182!1.49e-31!12;CL:0000223!2.04e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.58e-49;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.58e-49,12;CL:0000223,1.34e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.86e-37;11!UBERON:0009497;9.79e-32;13!UBERON:0001041;7.66e-14;30!UBERON:0003104;2.25e-13;31!CL:0000223;3.46e-10;58 | |||
|ontology_enrichment_disease=DOID:178!4.54e-09!1;DOID:326!4.54e-09!1;DOID:3978!4.54e-09!1;DOID:3394!4.54e-09!1;DOID:5844!4.54e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.67e-34!26;UBERON:0009854!1.02e-32!23;UBERON:0002107!1.76e-32!19;UBERON:0006925!1.76e-32!19;UBERON:0008836!1.76e-32!19;UBERON:0009856!9.25e-29!26;UBERON:0008835!7.11e-28!22;UBERON:0003894!7.11e-28!22;UBERON:0002368!3.77e-25!35;UBERON:0007499!2.27e-24!25;UBERON:0009497!2.27e-24!25;UBERON:0000015!2.27e-24!25;UBERON:0002423!2.27e-24!25;UBERON:0006235!2.27e-24!25;UBERON:0004161!2.27e-24!25;UBERON:0000949!7.09e-23!45;UBERON:0003929!5.13e-22!54;UBERON:0002365!2.15e-19!31;UBERON:0002330!2.15e-19!31;UBERON:0002530!6.89e-17!59;UBERON:0005172!2.10e-15!55;UBERON:0005173!2.10e-15!55;UBERON:0002417!1.06e-13!61;UBERON:0000916!1.06e-13!61;UBERON:0005911!1.07e-13!82;UBERON:0004921!1.11e-10!129;UBERON:0004185!1.11e-10!129;UBERON:0001007!9.49e-10!155;UBERON:0001555!9.49e-10!155;UBERON:0007026!9.49e-10!155;UBERON:0001041!2.31e-09!98;UBERON:0000077!3.75e-09!130;UBERON:0002146!4.19e-09!1;UBERON:0005623!4.19e-09!1;UBERON:0001301!4.91e-09!1;UBERON:0001154!5.75e-09!1;UBERON:0001153!5.75e-09!1;UBERON:0002336!8.49e-09!1;UBERON:0001018!8.49e-09!1;UBERON:0002473!8.49e-09!1;UBERON:0005340!8.49e-09!1;UBERON:0002316!8.49e-09!1;UBERON:0003544!8.49e-09!1;UBERON:0001020!8.49e-09!1;UBERON:0005970!8.49e-09!1;UBERON:0002437!8.49e-09!1;UBERON:0004119!1.06e-08!169;UBERON:0000925!1.06e-08!169;UBERON:0006595!1.06e-08!169;UBERON:0005177!1.96e-08!107;UBERON:0000466!3.85e-08!126;UBERON:0001048!1.27e-07!168;UBERON:0000490!3.42e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.73e-42;25!UBERON:0002365;2.13e-32;31!UBERON:0002330;2.13e-32;31!UBERON:0002368;1.41e-28;33!UBERON:0000949;5.33e-25;43!UBERON:0005172;1.69e-12;52!UBERON:0005173;1.69e-12;52!UBERON:0002417;5.80e-11;58!UBERON:0000916;5.80e-11;58!UBERON:0002530;7.53e-11;57!UBERON:0001007;5.36e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.89e-55,19;UBERON:0006925,3.89e-55,19;UBERON:0008836,3.89e-55,19;UBERON:0008835,1.39e-47,22;UBERON:0003894,1.39e-47,22;UBERON:0009854,1.68e-45,23;UBERON:0007499,7.73e-42,25;UBERON:0009497,7.73e-42,25;UBERON:0000015,7.73e-42,25;UBERON:0002423,7.73e-42,25;UBERON:0006235,7.73e-42,25;UBERON:0004161,7.73e-42,25;UBERON:0009856,3.23e-40,26;UBERON:0002365,1.12e-33,31;UBERON:0002330,1.12e-33,31;UBERON:0002368,8.69e-30,35;UBERON:0000949,4.36e-29,45;UBERON:0003929,3.67e-24,54;UBERON:0005172,3.71e-19,54;UBERON:0005173,3.71e-19,54;UBERON:0002530,1.71e-17,59;UBERON:0002417,3.42e-17,60;UBERON:0000916,3.42e-17,60;UBERON:0005911,1.06e-15,82;UBERON:0005177,1.29e-12,101;UBERON:0001041,1.09e-11,87;UBERON:0004921,1.33e-10,118;UBERON:0009569,6.05e-09,112;UBERON:0003914,1.55e-08,117;UBERON:0001007,1.70e-08,145;UBERON:0001555,1.70e-08,145;UBERON:0007026,1.70e-08,145;UBERON:0000490,2.26e-08,148;UBERON:0005256,3.70e-08,122;UBERON:0004119,1.25e-07,160;UBERON:0000925,1.25e-07,160;UBERON:0006595,1.25e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,292.804130438429,89.437276717664,64.9868897349544,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.368455241475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.0948805720772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.599037001496973,0,0,0,0,0,8.6661500537946,8.07675412135431,8.021021718648,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.500265979959,68.9035822343551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,292.804130438429,89.437276717664,64.9868897349544,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.368455241475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.0948805720772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.599037001496973,0,0,0,0,0,8.6661500537946,8.07675412135431,8.021021718648,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.500265979959,68.9035822343551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@ALB | |||
}} | }} |
Latest revision as of 13:16, 18 September 2015
Short description: | p12@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 103bp_to_ENST00000486939_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.58e-49 | 12 |
endodermal cell | 1.34e-13 | 58 |