FFCP PHASE1:Hg19::chr10:5541525..5541539,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51806 | |EntrezGene=51806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18180 | |HGNC=18180 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZT1,Q53H37 | |UniProt=Q9NZT1,Q53H37 | ||
|association_with_transcript=0bp_to_ENST00000380332,NM_017422,uc001iic.2_5end | |association_with_transcript=0bp_to_ENST00000380332,NM_017422,uc001iic.2_5end | ||
|cluster_id=chr10:5541525..5541539,- | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_1_at_CALML5_5end | |description=CAGE_peak_1_at_CALML5_5end | ||
|id=chr10:5541525..5541539,- | |id=chr10:5541525..5541539,- | ||
|ontology_enrichment_celltype=CL:0000622;7.25e-13;5!CL:0002328;4.93e-12;3!CL:0000154;9.82e-11;6!CL:0002159;1.22e-09;14!CL:0000575;2.89e-09;2!CL:0001014;7.13e-09;2!CL:0001016;7.13e-09;2!CL:0000317;8.52e-09;2!CL:1000448;8.52e-09;2!CL:0002308;8.52e-09;2!CL:0002140;8.52e-09;2!CL:0000097;2.41e-07;5!CL:0000150;3.62e-07;9!CL:0000362;4.52e-07;9!CL:0002202;6.72e-07;9!CL:0002632;6.72e-07;9 | |ontology_enrichment_celltype=CL:0002076!5.11e-13!43;CL:0000622!1.28e-12!5;CL:0000154!1.93e-10!6;CL:0002368!3.74e-10!13;CL:0000223!2.29e-09!59;CL:0002159!1.13e-08!13;CL:0002328!3.43e-08!3;CL:0002623!3.78e-08!3;CL:0000066!6.01e-08!254;CL:0002621!7.43e-08!3;CL:0002251!1.21e-07!21;CL:0000150!8.27e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000622;7.25e-13;5!CL:0002328;4.93e-12;3!CL:0000154;9.82e-11;6!CL:0002159;1.22e-09;14!CL:0000575;2.89e-09;2!CL:0001014;7.13e-09;2!CL:0001016;7.13e-09;2!CL:0000317;8.52e-09;2!CL:1000448;8.52e-09;2!CL:0002308;8.52e-09;2!CL:0002140;8.52e-09;2!CL:0000097;2.41e-07;5!CL:0000150;3.62e-07;9!CL:0000362;4.52e-07;9!CL:0002202;6.72e-07;9!CL:0002632;6.72e-07;9 | ||
|ontology_enrichment_disease=DOID:5093;1.43e-16;4!DOID:1612;1.43e-16;4 | |ontology_enrichment_celltype_v019_2=CL:0000622,7.47e-13,5;CL:0002328,5.12e-12,3;CL:0000154,1.01e-10,6;CL:0002159,1.28e-09,14;CL:0000575,2.84e-09,2;CL:0001014,6.85e-09,2;CL:0001016,6.85e-09,2;CL:0000317,9.04e-09,2;CL:1000448,9.04e-09,2;CL:0002308,9.04e-09,2;CL:0002140,9.04e-09,2;CL:0000097,2.39e-07,5;CL:0002028,2.39e-07,5;CL:0000150,3.68e-07,9;CL:0000362,4.78e-07,9;CL:0002202,7.06e-07,9;CL:0002632,7.06e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0001044;1.99e-17;6!UBERON:0003293;1.99e-17;6!UBERON:0003294;1.99e-17;6!UBERON:0010047;1.99e-17;6!UBERON:0003408;1.99e-17;6!UBERON:0000167;1.99e-17;6!UBERON:0001041;1.68e-13;14!UBERON:0000165;1.50e-12;28!UBERON:0000161;1.95e-12;19!UBERON:0000166;1.95e-12;19!UBERON:0004815;4.93e-12;3!UBERON:0002031;4.93e-12;3!UBERON:0001829;9.33e-10;2!UBERON:0000153;3.85e-09;54!UBERON:0000341;8.52e-09;2!UBERON:0002419;8.52e-09;2!UBERON:0007771;8.52e-09;2!UBERON:0003297;8.52e-09;2!UBERON:0001821;8.52e-09;2!UBERON:0003487;8.52e-09;2!UBERON:0001820;8.52e-09;2!UBERON:0002370;1.02e-08;2!UBERON:0005058;1.02e-08;2!UBERON:0009113;1.02e-08;2!UBERON:0007811;1.53e-07;52!UBERON:0002185;2.13e-07;5!UBERON:0002365;2.48e-07;31!UBERON:0002330;2.48e-07;31!UBERON:0000915;2.74e-07;52 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!4.30e-11!4;DOID:1612!4.30e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.43e-16;4!DOID:1612;1.43e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.37e-16,4;DOID:1612,1.37e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.25e-20!72;UBERON:0000166!9.95e-18!21;UBERON:0003408!8.40e-16!10;UBERON:0001044!9.90e-16!6;UBERON:0003293!9.90e-16!6;UBERON:0003294!9.90e-16!6;UBERON:0010047!9.90e-16!6;UBERON:0000167!9.90e-16!6;UBERON:0000165!1.86e-12!28;UBERON:0000930!1.86e-12!28;UBERON:0000161!2.45e-12!35;UBERON:0000078!2.31e-10!18;UBERON:0004119!3.04e-10!169;UBERON:0000925!3.04e-10!169;UBERON:0006595!3.04e-10!169;UBERON:0000065!3.86e-10!53;UBERON:0003102!1.13e-09!95;UBERON:0000915!1.69e-09!52;UBERON:0001041!3.21e-09!98;UBERON:0005181!8.92e-09!35;UBERON:0000072!1.73e-08!46;UBERON:0001444!2.30e-08!48;UBERON:0004807!2.71e-08!28;UBERON:0004815!3.43e-08!3;UBERON:0002031!3.43e-08!3;UBERON:0001007!3.56e-08!155;UBERON:0001555!3.56e-08!155;UBERON:0007026!3.56e-08!155;UBERON:0000464!6.80e-08!104;UBERON:0001949!7.43e-08!3;UBERON:0006562!8.55e-08!11;UBERON:0005178!1.05e-07!34;UBERON:0002224!1.05e-07!34;UBERON:0007196!1.32e-07!14;UBERON:0001558!1.32e-07!14;UBERON:0000077!2.27e-07!130;UBERON:0004921!2.32e-07!129;UBERON:0004185!2.32e-07!129;UBERON:0001829!9.43e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.99e-17;6!UBERON:0003293;1.99e-17;6!UBERON:0003294;1.99e-17;6!UBERON:0010047;1.99e-17;6!UBERON:0003408;1.99e-17;6!UBERON:0000167;1.99e-17;6!UBERON:0001041;1.68e-13;14!UBERON:0000165;1.50e-12;28!UBERON:0000161;1.95e-12;19!UBERON:0000166;1.95e-12;19!UBERON:0004815;4.93e-12;3!UBERON:0002031;4.93e-12;3!UBERON:0001829;9.33e-10;2!UBERON:0000153;3.85e-09;54!UBERON:0000341;8.52e-09;2!UBERON:0002419;8.52e-09;2!UBERON:0007771;8.52e-09;2!UBERON:0003297;8.52e-09;2!UBERON:0001821;8.52e-09;2!UBERON:0003487;8.52e-09;2!UBERON:0001820;8.52e-09;2!UBERON:0002370;1.02e-08;2!UBERON:0005058;1.02e-08;2!UBERON:0009113;1.02e-08;2!UBERON:0007811;1.53e-07;52!UBERON:0002185;2.13e-07;5!UBERON:0002365;2.48e-07;31!UBERON:0002330;2.48e-07;31!UBERON:0000915;2.74e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,2.73e-19,10;UBERON:0001044,1.96e-17,6;UBERON:0003293,1.96e-17,6;UBERON:0003294,1.96e-17,6;UBERON:0010047,1.96e-17,6;UBERON:0000167,1.96e-17,6;UBERON:0000166,1.56e-16,22;UBERON:0001004,5.30e-13,74;UBERON:0000153,9.11e-13,62;UBERON:0007811,9.11e-13,62;UBERON:0000165,4.72e-12,29;UBERON:0000930,4.72e-12,29;UBERON:0004815,5.12e-12,3;UBERON:0002031,5.12e-12,3;UBERON:0001041,1.70e-10,87;UBERON:0001042,8.30e-10,10;UBERON:0009145,8.30e-10,10;UBERON:0001829,9.33e-10,2;UBERON:0001444,2.37e-09,49;UBERON:0000161,2.53e-09,36;UBERON:0006562,6.93e-09,11;UBERON:0003102,7.16e-09,99;UBERON:0000341,8.69e-09,2;UBERON:0002419,9.04e-09,2;UBERON:0007771,9.04e-09,2;UBERON:0003297,9.04e-09,2;UBERON:0001821,9.04e-09,2;UBERON:0003487,9.04e-09,2;UBERON:0001820,9.04e-09,2;UBERON:0005089,9.04e-09,2;UBERON:0005088,9.04e-09,2;UBERON:0000915,2.42e-08,52;UBERON:0000033,7.19e-08,56;UBERON:0000072,7.35e-08,47;UBERON:0004807,1.63e-07,28;UBERON:0002185,2.18e-07,5;UBERON:0002365,3.22e-07,31;UBERON:0002330,3.22e-07,31 | |||
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| ||
|short_description=p1@CALML5 | |short_description=p1@CALML5 | ||
}} | }} |
Latest revision as of 13:16, 18 September 2015
Short description: | p1@CALML5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALML5_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 0bp_to_ENST00000380332, NM_017422, uc001iic.2_5end |
EntrezGene: | CALML5 |
HGNC: | 18180 |
UniProt: | Q9NZT1Q53H37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 7.47e-13 | 5 |
bronchial epithelial cell | 5.12e-12 | 3 |
protein secreting cell | 1.01e-10 | 6 |
general ecto-epithelial cell | 1.28e-09 | 14 |
corneal epithelial cell | 2.84e-09 | 2 |
CD1a-positive Langerhans cell | 6.85e-09 | 2 |
immature CD1a-positive Langerhans cell | 6.85e-09 | 2 |
sebum secreting cell | 9.04e-09 | 2 |
epithelial cell of sweat gland | 9.04e-09 | 2 |
epithelial cell of skin gland | 9.04e-09 | 2 |
acinar cell of sebaceous gland | 9.04e-09 | 2 |
mast cell | 2.39e-07 | 5 |
basophil mast progenitor cell | 2.39e-07 | 5 |
glandular epithelial cell | 3.68e-07 | 9 |
epidermal cell | 4.78e-07 | 9 |
epithelial cell of tracheobronchial tree | 7.06e-07 | 9 |
epithelial cell of lower respiratory tract | 7.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.37e-16 | 4 |
breast cancer | 1.37e-16 | 4 |