FFCP PHASE1:Hg19::chr4:74285267..74285277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000495173_5end | |association_with_transcript=3bp_to_ENST00000495173_5end | ||
|cluster_id=chr4:74285267..74285277,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_40_at_ALB_5end | |description=CAGE_peak_40_at_ALB_5end | ||
|id=chr4:74285267..74285277,+ | |id=chr4:74285267..74285277,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.07e-35!12;CL:0000417!3.07e-35!12;CL:0000668!3.07e-35!12;CL:0000414!3.07e-35!12;CL:0000412!3.07e-35!12;CL:0000182!3.07e-35!12;CL:0000223!3.17e-09!59 | |ontology_enrichment_celltype=CL:0000181!3.07e-35!12;CL:0000417!3.07e-35!12;CL:0000668!3.07e-35!12;CL:0000414!3.07e-35!12;CL:0000412!3.07e-35!12;CL:0000182!3.07e-35!12;CL:0000223!3.17e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.20e-46;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.20e-46,12;CL:0000223,1.08e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.92e-32;11!UBERON:0009497;2.77e-27;13!UBERON:0001041;4.21e-12;30!UBERON:0003104;1.29e-11;31!CL:0000223;8.94e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.33e-56;19!UBERON:0006925;2.33e-56;19!UBERON:0002423;7.00e-43;25!UBERON:0002365;8.03e-35;31!UBERON:0002330;8.03e-35;31!UBERON:0002368;1.31e-28;33!UBERON:0000949;3.03e-22;43!UBERON:0005172;3.38e-14;52!UBERON:0005173;3.38e-14;52!UBERON:0002530;5.46e-12;57!UBERON:0002417;7.77e-12;58!UBERON:0000916;7.77e-12;58!UBERON:0001007;3.27e-08;81 | |||
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|short_description=p40@ALB | |short_description=p40@ALB | ||
}} | }} |
Latest revision as of 13:21, 18 September 2015
Short description: | p40@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 3bp_to_ENST00000495173_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.20e-46 | 12 |
endodermal cell | 1.08e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.33e-56 | 19 |
digestive gland | 2.33e-56 | 19 |
liver bud | 2.33e-56 | 19 |
hepatic diverticulum | 1.05e-48 | 22 |
liver primordium | 1.05e-48 | 22 |
digestive tract diverticulum | 1.36e-46 | 23 |
epithelial sac | 7.01e-43 | 25 |
epithelium of foregut-midgut junction | 7.01e-43 | 25 |
anatomical boundary | 7.01e-43 | 25 |
hepatobiliary system | 7.01e-43 | 25 |
foregut-midgut junction | 7.01e-43 | 25 |
septum transversum | 7.01e-43 | 25 |
sac | 3.08e-41 | 26 |
exocrine gland | 1.31e-34 | 31 |
exocrine system | 1.31e-34 | 31 |
endocrine gland | 1.15e-30 | 35 |
endocrine system | 7.26e-24 | 45 |
gut epithelium | 6.87e-20 | 54 |
abdomen element | 6.87e-20 | 54 |
abdominal segment element | 6.87e-20 | 54 |
gland | 3.34e-18 | 59 |
abdominal segment of trunk | 6.73e-18 | 60 |
abdomen | 6.73e-18 | 60 |
endo-epithelium | 4.47e-13 | 82 |
foregut | 2.56e-12 | 87 |
trunk region element | 1.37e-10 | 101 |
subdivision of trunk | 1.56e-09 | 112 |
epithelial tube | 4.07e-09 | 117 |
subdivision of digestive tract | 5.84e-09 | 118 |
trunk mesenchyme | 9.81e-09 | 122 |
digestive system | 2.93e-07 | 145 |
digestive tract | 2.93e-07 | 145 |
primitive gut | 2.93e-07 | 145 |
unilaminar epithelium | 3.70e-07 | 148 |