FFCP PHASE1:Hg19::chr11:60048004..60048017,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51338 | |EntrezGene=51338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13371 | |HGNC=13371 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JQ5,Q4JF27 | |UniProt=Q96JQ5,Q4JF27 | ||
|association_with_transcript=0bp_to_ENST00000532114,NM_001243266,NM_024021,NM_148975_5end | |association_with_transcript=0bp_to_ENST00000532114,NM_001243266,NM_024021,NM_148975_5end | ||
|cluster_id=chr11:60048004..60048017,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_2_at_MS4A4A_5end | |description=CAGE_peak_2_at_MS4A4A_5end | ||
|id=chr11:60048004..60048017,+ | |id=chr11:60048004..60048017,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.66e-29!70;CL:0000557!7.16e-29!71;CL:0002194!5.20e-26!63;CL:0000576!5.20e-26!63;CL:0000040!5.20e-26!63;CL:0000559!5.20e-26!63;CL:0000766!5.90e-26!76;CL:0002009!8.68e-25!65;CL:0000763!5.74e-16!112;CL:0000049!5.74e-16!112;CL:0002057!2.60e-13!42;CL:0000860!6.52e-12!45;CL:0002031!1.19e-11!124;CL:0002087!4.95e-09!119;CL:0000738!7.73e-09!140;CL:0002032!2.28e-07!165;CL:0000837!2.28e-07!165;CL:0002274!5.84e-07!5;CL:0000457!5.84e-07!5;CL:0002191!5.84e-07!5;CL:0000097!5.84e-07!5;CL:0000831!5.84e-07!5;CL:0002028!5.84e-07!5 | |ontology_enrichment_celltype=CL:0000839!1.66e-29!70;CL:0000557!7.16e-29!71;CL:0002194!5.20e-26!63;CL:0000576!5.20e-26!63;CL:0000040!5.20e-26!63;CL:0000559!5.20e-26!63;CL:0000766!5.90e-26!76;CL:0002009!8.68e-25!65;CL:0000763!5.74e-16!112;CL:0000049!5.74e-16!112;CL:0002057!2.60e-13!42;CL:0000860!6.52e-12!45;CL:0002031!1.19e-11!124;CL:0002087!4.95e-09!119;CL:0000738!7.73e-09!140;CL:0002032!2.28e-07!165;CL:0000837!2.28e-07!165;CL:0002274!5.84e-07!5;CL:0000457!5.84e-07!5;CL:0002191!5.84e-07!5;CL:0000097!5.84e-07!5;CL:0000831!5.84e-07!5;CL:0002028!5.84e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.13e-19;6!CL:0002619;1.63e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.21e-19,6;CL:0000839,6.54e-14,66;CL:0000557,1.26e-13,67;CL:0000766,2.57e-12,72;CL:0002194,2.33e-11,59;CL:0000576,2.33e-11,59;CL:0000040,2.33e-11,59;CL:0000559,2.33e-11,59;CL:0002009,7.58e-11,61;CL:0002619,1.64e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.44e-10;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-52!115;UBERON:0002371!4.54e-25!80;UBERON:0001474!3.02e-22!86;UBERON:0002405!4.98e-22!115;UBERON:0002390!5.66e-21!102;UBERON:0003061!5.66e-21!102;UBERON:0002193!1.27e-19!112;UBERON:0001049!7.03e-18!57;UBERON:0005068!7.03e-18!57;UBERON:0006241!7.03e-18!57;UBERON:0007135!7.03e-18!57;UBERON:0000062!4.65e-17!511;UBERON:0004765!9.87e-17!101;UBERON:0001434!9.87e-17!101;UBERON:0003080!1.27e-14!42;UBERON:0002616!1.27e-14!59;UBERON:0002780!1.14e-13!41;UBERON:0001890!1.14e-13!41;UBERON:0006240!1.14e-13!41;UBERON:0003075!9.32e-12!86;UBERON:0007284!9.32e-12!86;UBERON:0000955!1.23e-11!69;UBERON:0006238!1.23e-11!69;UBERON:0002020!1.30e-11!34;UBERON:0003528!1.30e-11!34;UBERON:0001017!1.67e-11!82;UBERON:0005743!2.48e-11!86;UBERON:0002791!6.11e-11!33;UBERON:0000468!6.91e-11!659;UBERON:0002346!9.31e-11!90;UBERON:0000467!1.03e-10!625;UBERON:0000480!1.24e-10!626;UBERON:0001893!1.86e-10!34;UBERON:0000922!7.34e-10!612;UBERON:0002050!1.76e-09!605;UBERON:0005423!1.76e-09!605;UBERON:0000073!2.72e-09!94;UBERON:0001016!2.72e-09!94;UBERON:0001869!3.97e-09!32;UBERON:0000923!4.90e-09!604;UBERON:0005291!4.90e-09!604;UBERON:0006598!4.90e-09!604;UBERON:0002532!4.90e-09!604;UBERON:0002298!7.93e-09!8;UBERON:0003081!9.13e-09!216;UBERON:0003056!1.30e-08!61;UBERON:0002619!4.79e-08!22;UBERON:0002204!1.26e-07!167;UBERON:0002420!1.87e-07!9;UBERON:0007245!1.87e-07!9;UBERON:0010009!1.87e-07!9;UBERON:0010011!1.87e-07!9;UBERON:0000454!1.87e-07!9;UBERON:0000479!3.19e-07!787;UBERON:0002308!3.30e-07!9;UBERON:0000125!3.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.05e-11;4!UBERON:0010133;3.05e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.37e-25,114;UBERON:0002405,5.31e-13,93;UBERON:0002371,2.14e-11,76;UBERON:0003296,3.43e-11,4;UBERON:0010133,3.43e-11,4;UBERON:0002390,7.45e-11,98;UBERON:0003061,7.45e-11,98;UBERON:0002193,2.50e-10,108;UBERON:0001474,3.45e-10,82;UBERON:0004765,7.74e-09,90;UBERON:0003081,1.20e-07,203;UBERON:0001434,1.82e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,167.264859257223,100.730930131903,118.74233667936,1.89017710413434,0.377875943688809,0.485168122375632,0.929716147622738,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.752969358170419,0.272906150057846,1.34834090667051,0.612167784741805,0.641858054152187,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0.736555271975129,0.949387162322653,2.11255286311942,0.637812899895131,0.628975936525128,0.22465726229299,0.600707571366025,0,0.570025487482497,0.59675003159727,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,1.9472843619281,1.39303789839414,11.833258486179,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.8994711732009,9.82817913584798,34.482429650985,0,0,0,0,0,0,0.492663237895943,0.352193736052904,3.31724984865235,3.17063897517315,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5948536769429,34.1534822173846,18.9750545534728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28550171051106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0,0,5.64862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0,0.425846237690326,0,1.22896305723383,1.11838053946208,1.33479313369527,0.19538809540204,0,0,0,0,0,0,8.49747439776985,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,1.39473591775749,1.65770349318689,0,0,0,0,0,0,0,1.67693789582787,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,1.23840590304675,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,3.79119477770928,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0.678923115418936,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,1.11712960508902,0.458320848023367,0,0.199679000498991,0.429226048136571,1.33902874465124,0.604651252380536,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0,0,0.121499113316049,0,2.91581117007033,0.786818822024972,0,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,2.19828350517124,0,0.129282956361551,0.52893040697076,0,0,6.0868825163586,1.72924735609633,3.31391244277756,2.48083010905975,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0.610131324509816,0.500763722825999,1.14681839138014,1.22021956690538,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,1.56302802246618,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0,0,1.60710550763486,1.00885116665647,3.03482802118316,1.59363533945908,2.12885688390333,0,0,0.135939465953663,0.131545547125698,0,0,1.88383422841234,0.157115589916002,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,1.12929087541872,1.1598144313382,1.94284397223656,0,0,0,0,0,0,1.54348316215889,0.437119121007915,0,1.96118657403124,0,1.17785080268967,0.297046400327086,0,0,7.04879384848902,3.6740996144939,0,0,0,0,1.46067277649303,1.37618785021362,1.00337708206016,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0,0,0.517164979309476,0.852935927603924,0.23806443146374,0.904244737704086,2.48298857183432,0,0.636471582781649,0.404234377916439,0,0.342233301085281,0.26940821205835,2.07994395638761,0.99798106963804,0,0,0,0,2.34640942403454,0.122241444182866,1.62758471326295,0.665756774185513,2.21401172950129,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,167.264859257223,100.730930131903,118.74233667936,1.89017710413434,0.377875943688809,0.485168122375632,0.929716147622738,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.752969358170419,0.272906150057846,1.34834090667051,0.612167784741805,0.641858054152187,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0.736555271975129,0.949387162322653,2.11255286311942,0.637812899895131,0.628975936525128,0.22465726229299,0.600707571366025,0,0.570025487482497,0.59675003159727,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,1.9472843619281,1.39303789839414,11.833258486179,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.8994711732009,9.82817913584798,34.482429650985,0,0,0,0,0,0,0.492663237895943,0.352193736052904,3.31724984865235,3.17063897517315,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5948536769429,34.1534822173846,18.9750545534728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28550171051106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0,0,5.64862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0,0.425846237690326,0,1.22896305723383,1.11838053946208,1.33479313369527,0.19538809540204,0,0,0,0,0,0,8.49747439776985,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,1.39473591775749,1.65770349318689,0,0,0,0,0,0,0,1.67693789582787,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,1.23840590304675,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,3.79119477770928,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0.678923115418936,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,1.11712960508902,0.458320848023367,0,0.199679000498991,0.429226048136571,1.33902874465124,0.604651252380536,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0,0,0.121499113316049,0,2.91581117007033,0.786818822024972,0,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,2.19828350517124,0,0.129282956361551,0.52893040697076,0,0,6.0868825163586,1.72924735609633,3.31391244277756,2.48083010905975,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0.610131324509816,0.500763722825999,1.14681839138014,1.22021956690538,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,1.56302802246618,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0,0,1.60710550763486,1.00885116665647,3.03482802118316,1.59363533945908,2.12885688390333,0,0,0.135939465953663,0.131545547125698,0,0,1.88383422841234,0.157115589916002,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,1.12929087541872,1.1598144313382,1.94284397223656,0,0,0,0,0,0,1.54348316215889,0.437119121007915,0,1.96118657403124,0,1.17785080268967,0.297046400327086,0,0,7.04879384848902,3.6740996144939,0,0,0,0,1.46067277649303,1.37618785021362,1.00337708206016,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0,0,0.517164979309476,0.852935927603924,0.23806443146374,0.904244737704086,2.48298857183432,0,0.636471582781649,0.404234377916439,0,0.342233301085281,0.26940821205835,2.07994395638761,0.99798106963804,0,0,0,0,2.34640942403454,0.122241444182866,1.62758471326295,0.665756774185513,2.21401172950129,0 | ||
|short_description=p2@MS4A4A | |short_description=p2@MS4A4A | ||
}} | }} |
Latest revision as of 13:21, 18 September 2015
Short description: | p2@MS4A4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MS4A4A_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000532114, NM_001243266, NM_024021, NM_148975_5end |
EntrezGene: | MS4A4A |
HGNC: | 13371 |
UniProt: | Q96JQ5Q4JF27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.21e-19 | 6 |
myeloid lineage restricted progenitor cell | 6.54e-14 | 66 |
granulocyte monocyte progenitor cell | 1.26e-13 | 67 |
myeloid leukocyte | 2.57e-12 | 72 |
monopoietic cell | 2.33e-11 | 59 |
monocyte | 2.33e-11 | 59 |
monoblast | 2.33e-11 | 59 |
promonocyte | 2.33e-11 | 59 |
macrophage dendritic cell progenitor | 7.58e-11 | 61 |
adult endothelial progenitor cell | 1.64e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.37e-25 | 114 |
immune system | 5.31e-13 | 93 |
bone marrow | 2.14e-11 | 76 |
gland of diencephalon | 3.43e-11 | 4 |
neuroendocrine gland | 3.43e-11 | 4 |
hematopoietic system | 7.45e-11 | 98 |
blood island | 7.45e-11 | 98 |
hemolymphoid system | 2.50e-10 | 108 |
bone element | 3.45e-10 | 82 |
skeletal element | 7.74e-09 | 90 |
lateral plate mesoderm | 1.20e-07 | 203 |
skeletal system | 1.82e-07 | 100 |