FFCP PHASE1:Hg19::chr11:60282862..60282871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=503497 | |EntrezGene=503497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16674 | |HGNC=16674 | ||
|TSSclassifier=strong | |||
|UniProt=Q5J8X5 | |UniProt=Q5J8X5 | ||
|association_with_transcript=-14bp_to_ENST00000378185,ENST00000378186,ENST00000437058,NM_001012417,NM_001100909,uc001nps.2,uc009ync.2,uc009ynd.2_5end | |association_with_transcript=-14bp_to_ENST00000378185,ENST00000378186,ENST00000437058,NM_001012417,NM_001100909,uc001nps.2,uc009ync.2,uc009ynd.2_5end | ||
|cluster_id=chr11:60282862..60282871,+ | |||
|coexpression_cluster_id=C322 | |coexpression_cluster_id=C322 | ||
|description=CAGE_peak_1_at_MS4A13_5end | |description=CAGE_peak_1_at_MS4A13_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.21e-21;5!UBERON:0009117;3.02e-11;10!UBERON:0005564;3.02e-11;10 | |ontology_enrichment_development_v019=UBERON:0007123;4.21e-21;5!UBERON:0009117;3.02e-11;10!UBERON:0005564;3.02e-11;10 | ||
|ontology_enrichment_disease=DOID:1036!4.55e-07!8 | |ontology_enrichment_disease=DOID:1036!4.55e-07!8 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.86e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!2.86e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.21e-21;5!UBERON:0000473;1.07e-13;8!UBERON:0003135;2.37e-10;11 | |ontology_enrichment_uberon_v019=UBERON:0002046;4.21e-21;5!UBERON:0000473;1.07e-13;8!UBERON:0003135;2.37e-10;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.21e-21,5;UBERON:0004117,4.21e-21,5;UBERON:0007689,4.21e-21,5;UBERON:0007123,4.21e-21,5;UBERON:0003091,4.21e-21,5;UBERON:0000473,1.07e-13,8;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0003135,2.37e-10,11;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p1@MS4A13 | |short_description=p1@MS4A13 | ||
}} | }} |
Latest revision as of 13:43, 18 September 2015
Short description: | p1@MS4A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MS4A13_5end |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | -14bp_to_ENST00000378185, ENST00000378186, ENST00000437058, NM_001012417, NM_001100909, uc001nps.2, uc009ync.2, uc009ynd.2_5end |
EntrezGene: | MS4A13 |
HGNC: | 16674 |
UniProt: | Q5J8X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.21e-21 | 5 |
pharyngeal pouch | 4.21e-21 | 5 |
thyroid diverticulum | 4.21e-21 | 5 |
pharyngeal pouch 2 | 4.21e-21 | 5 |
thyroid primordium | 4.21e-21 | 5 |
testis | 1.07e-13 | 8 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
male reproductive organ | 2.37e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |