FFCP PHASE1:Hg19::chr2:79386874..79386886,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5068 | |EntrezGene=5068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8601 | |HGNC=8601 | ||
|TSSclassifier=strong | |||
|UniProt=Q06141,Q53S56 | |UniProt=Q06141,Q53S56 | ||
|association_with_transcript=0bp_to_ENST00000305165,ENST00000409839,ENST00000490901,NM_002580,NM_138937,NM_138938,uc002soe.1,uc002sof.1_5end | |association_with_transcript=0bp_to_ENST00000305165,ENST00000409839,ENST00000490901,NM_002580,NM_138937,NM_138938,uc002soe.1,uc002sof.1_5end | ||
|cluster_id=chr2:79386874..79386886,- | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_1_at_REG3A_5end | |description=CAGE_peak_1_at_REG3A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.14e-14;1!UBERON:0006242;1.51e-13;1 | |ontology_enrichment_development_v019=UBERON:0000358;9.14e-14;1!UBERON:0006242;1.51e-13;1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.42e-15!27;UBERON:0005409!1.77e-14!35;UBERON:0001007!7.07e-11!155;UBERON:0001555!7.07e-11!155;UBERON:0007026!7.07e-11!155;UBERON:0004921!1.53e-10!129;UBERON:0004185!1.53e-10!129;UBERON:0004119!1.08e-09!169;UBERON:0000925!1.08e-09!169;UBERON:0006595!1.08e-09!169;UBERON:0001831!3.10e-08!1;UBERON:0001567!3.10e-08!1;UBERON:0008801!3.10e-08!1;UBERON:0007029!3.33e-08!1;UBERON:0001154!3.83e-08!1;UBERON:0001153!3.83e-08!1;UBERON:0002146!4.11e-08!1;UBERON:0005623!4.11e-08!1;UBERON:0002336!5.07e-08!1;UBERON:0001018!5.07e-08!1;UBERON:0002473!5.07e-08!1;UBERON:0005340!5.07e-08!1;UBERON:0002316!5.07e-08!1;UBERON:0003544!5.07e-08!1;UBERON:0001020!5.07e-08!1;UBERON:0005970!5.07e-08!1;UBERON:0002437!5.07e-08!1;UBERON:0002108!7.90e-08!14;UBERON:0001155!1.22e-07!9 | |ontology_enrichment_uberon=UBERON:0000160!3.42e-15!27;UBERON:0005409!1.77e-14!35;UBERON:0001007!7.07e-11!155;UBERON:0001555!7.07e-11!155;UBERON:0007026!7.07e-11!155;UBERON:0004921!1.53e-10!129;UBERON:0004185!1.53e-10!129;UBERON:0004119!1.08e-09!169;UBERON:0000925!1.08e-09!169;UBERON:0006595!1.08e-09!169;UBERON:0001831!3.10e-08!1;UBERON:0001567!3.10e-08!1;UBERON:0008801!3.10e-08!1;UBERON:0007029!3.33e-08!1;UBERON:0001154!3.83e-08!1;UBERON:0001153!3.83e-08!1;UBERON:0002146!4.11e-08!1;UBERON:0005623!4.11e-08!1;UBERON:0002336!5.07e-08!1;UBERON:0001018!5.07e-08!1;UBERON:0002473!5.07e-08!1;UBERON:0005340!5.07e-08!1;UBERON:0002316!5.07e-08!1;UBERON:0003544!5.07e-08!1;UBERON:0001020!5.07e-08!1;UBERON:0005970!5.07e-08!1;UBERON:0002437!5.07e-08!1;UBERON:0002108!7.90e-08!14;UBERON:0001155!1.22e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.44e-17;17!UBERON:0005409;9.56e-14;22!UBERON:0002108;3.54e-11;4!UBERON:0004921;4.64e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.44e-17;17!UBERON:0005409;9.56e-14;22!UBERON:0002108;3.54e-11;4!UBERON:0004921;4.64e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.44e-17,17;UBERON:0005409,3.72e-12,25;UBERON:0002108,3.54e-11,4 | |||
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|short_description=p1@REG3A | |short_description=p1@REG3A | ||
}} | }} |
Latest revision as of 14:01, 18 September 2015
Short description: | p1@REG3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_REG3A_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000305165, ENST00000409839, ENST00000490901, NM_002580, NM_138937, NM_138938, uc002soe.1, uc002sof.1_5end |
EntrezGene: | REG3A |
HGNC: | 8601 |
UniProt: | Q06141Q53S56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.44e-17 | 17 |
gastrointestinal system | 3.72e-12 | 25 |
small intestine | 3.54e-11 | 4 |