FFCP PHASE1:Hg19::chr17:10325261..10325267,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4626 | |EntrezGene=4626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7578 | |HGNC=7578 | ||
|TSSclassifier=strong | |||
|UniProt=P13535 | |UniProt=P13535 | ||
|association_with_transcript=0bp_to_ENST00000403437,NM_002472,uc002gmm.2_5end | |association_with_transcript=0bp_to_ENST00000403437,NM_002472,uc002gmm.2_5end | ||
|cluster_id=chr17:10325261..10325267,- | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_1_at_MYH8_5end | |description=CAGE_peak_1_at_MYH8_5end | ||
|id=chr17:10325261..10325267,- | |id=chr17:10325261..10325267,- | ||
|ontology_enrichment_celltype=CL:0000188!2.82e-21!9;CL:0000594!1.22e-16!3 | |ontology_enrichment_celltype=CL:0000188!2.82e-21!9;CL:0000594!1.22e-16!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;7.27e-08;2!CL:0000188;9.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,8.04e-08,2;CL:0000188,9.64e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.15e-14;1!UBERON:0004874;1.97e-14;1!UBERON:0008801;2.94e-14;1!UBERON:0008814;7.27e-08;2!UBERON:0010056;7.27e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!1.95e-13!10;UBERON:0009145!1.95e-13!10;UBERON:0000341!2.27e-12!2;UBERON:0001630!2.27e-12!2;UBERON:0005090!2.27e-12!2;UBERON:0003127!3.17e-12!2;UBERON:0006562!3.40e-12!11;UBERON:0008814!4.50e-09!15;UBERON:0000974!5.75e-09!10;UBERON:0003408!8.37e-09!10;UBERON:0001723!1.22e-08!3;UBERON:0001033!1.22e-08!3;UBERON:0010056!1.22e-08!3;UBERON:0000078!1.93e-07!18;UBERON:0001134!2.77e-07!61;UBERON:0002036!2.77e-07!61;UBERON:0003082!2.77e-07!61;UBERON:0003104!3.05e-07!238;UBERON:0009142!3.05e-07!238;UBERON:0002426!3.13e-07!1;UBERON:0003831!3.13e-07!1;UBERON:0003898!3.13e-07!1;UBERON:0004830!3.13e-07!1;UBERON:0001774!3.13e-07!1;UBERON:0003830!3.13e-07!1;UBERON:0005175!3.13e-07!1;UBERON:0003897!3.13e-07!1;UBERON:0001103!3.13e-07!1;UBERON:0010084!3.13e-07!1;UBERON:0007029!3.73e-07!1;UBERON:0002385!5.36e-07!63;UBERON:0001015!5.36e-07!63;UBERON:0000383!5.36e-07!63;UBERON:0000989!5.57e-07!1;UBERON:0008811!5.57e-07!1;UBERON:0006258!5.57e-07!1;UBERON:0005876!5.57e-07!1;UBERON:0004874!5.57e-07!1;UBERON:0001557!5.91e-07!19;UBERON:0001831!6.24e-07!1;UBERON:0001567!6.24e-07!1;UBERON:0008801!6.24e-07!1;UBERON:0005418!8.27e-07!1;UBERON:0001389!8.27e-07!1;UBERON:0000026!8.27e-07!1;UBERON:0008784!8.27e-07!1;UBERON:0006058!8.27e-07!1;UBERON:0003663!8.27e-07!1;UBERON:0001383!8.27e-07!1;UBERON:0004256!8.27e-07!1;UBERON:0002529!8.27e-07!1;UBERON:0004708!8.27e-07!1;UBERON:0002101!8.27e-07!1;UBERON:0004709!8.27e-07!1;UBERON:0003661!8.27e-07!1;UBERON:0002471!8.27e-07!1;UBERON:0004357!8.27e-07!1;UBERON:0009872!8.27e-07!1;UBERON:0004347!8.27e-07!1;UBERON:0005420!8.27e-07!1;UBERON:0005732!8.27e-07!1;UBERON:0006057!8.27e-07!1;UBERON:0000978!8.27e-07!1;UBERON:0002103!8.27e-07!1;UBERON:0001665!8.27e-07!1;UBERON:0003823!8.27e-07!1;UBERON:0000154!8.27e-07!1;UBERON:0005733!8.27e-07!1;UBERON:0005730!8.27e-07!1 | |ontology_enrichment_uberon=UBERON:0001042!1.95e-13!10;UBERON:0009145!1.95e-13!10;UBERON:0000341!2.27e-12!2;UBERON:0001630!2.27e-12!2;UBERON:0005090!2.27e-12!2;UBERON:0003127!3.17e-12!2;UBERON:0006562!3.40e-12!11;UBERON:0008814!4.50e-09!15;UBERON:0000974!5.75e-09!10;UBERON:0003408!8.37e-09!10;UBERON:0001723!1.22e-08!3;UBERON:0001033!1.22e-08!3;UBERON:0010056!1.22e-08!3;UBERON:0000078!1.93e-07!18;UBERON:0001134!2.77e-07!61;UBERON:0002036!2.77e-07!61;UBERON:0003082!2.77e-07!61;UBERON:0003104!3.05e-07!238;UBERON:0009142!3.05e-07!238;UBERON:0002426!3.13e-07!1;UBERON:0003831!3.13e-07!1;UBERON:0003898!3.13e-07!1;UBERON:0004830!3.13e-07!1;UBERON:0001774!3.13e-07!1;UBERON:0003830!3.13e-07!1;UBERON:0005175!3.13e-07!1;UBERON:0003897!3.13e-07!1;UBERON:0001103!3.13e-07!1;UBERON:0010084!3.13e-07!1;UBERON:0007029!3.73e-07!1;UBERON:0002385!5.36e-07!63;UBERON:0001015!5.36e-07!63;UBERON:0000383!5.36e-07!63;UBERON:0000989!5.57e-07!1;UBERON:0008811!5.57e-07!1;UBERON:0006258!5.57e-07!1;UBERON:0005876!5.57e-07!1;UBERON:0004874!5.57e-07!1;UBERON:0001557!5.91e-07!19;UBERON:0001831!6.24e-07!1;UBERON:0001567!6.24e-07!1;UBERON:0008801!6.24e-07!1;UBERON:0005418!8.27e-07!1;UBERON:0001389!8.27e-07!1;UBERON:0000026!8.27e-07!1;UBERON:0008784!8.27e-07!1;UBERON:0006058!8.27e-07!1;UBERON:0003663!8.27e-07!1;UBERON:0001383!8.27e-07!1;UBERON:0004256!8.27e-07!1;UBERON:0002529!8.27e-07!1;UBERON:0004708!8.27e-07!1;UBERON:0002101!8.27e-07!1;UBERON:0004709!8.27e-07!1;UBERON:0003661!8.27e-07!1;UBERON:0002471!8.27e-07!1;UBERON:0004357!8.27e-07!1;UBERON:0009872!8.27e-07!1;UBERON:0004347!8.27e-07!1;UBERON:0005420!8.27e-07!1;UBERON:0005732!8.27e-07!1;UBERON:0006057!8.27e-07!1;UBERON:0000978!8.27e-07!1;UBERON:0002103!8.27e-07!1;UBERON:0001665!8.27e-07!1;UBERON:0003823!8.27e-07!1;UBERON:0000154!8.27e-07!1;UBERON:0005733!8.27e-07!1;UBERON:0005730!8.27e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.19e-21;16!UBERON:0002036;8.19e-21;16!UBERON:0001723;1.09e-18;3!UBERON:0001033;1.09e-18;3!UBERON:0002426;5.42e-15;1!UBERON:0003831;5.42e-15;1!UBERON:0003898;5.42e-15;1!UBERON:0004830;5.42e-15;1!UBERON:0003830;5.42e-15;1!UBERON:0005175;5.42e-15;1!UBERON:0001774;5.42e-15;1!UBERON:0001103;5.42e-15;1!UBERON:0007029;8.17e-15;1!UBERON:0000989;1.97e-14;1!UBERON:0008811;1.97e-14;1!UBERON:0001831;2.94e-14;1!UBERON:0001567;2.94e-14;1!UBERON:0002385;9.82e-11;31!UBERON:0001015;9.82e-11;31!UBERON:0000383;9.82e-11;31!UBERON:0005090;3.82e-08;2!UBERON:0001630;3.82e-08;2!UBERON:0000341;4.09e-08;2!UBERON:0000922;4.14e-08;49!UBERON:0003127;5.02e-08;2!UBERON:0001829;8.89e-08;2!UBERON:0004089;8.89e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.50e-19,3;UBERON:0001033,9.50e-19,3;UBERON:0010056,9.50e-19,3;UBERON:0002426,5.42e-15,1;UBERON:0003831,5.42e-15,1;UBERON:0003898,5.42e-15,1;UBERON:0004830,5.42e-15,1;UBERON:0003830,5.42e-15,1;UBERON:0005175,5.42e-15,1;UBERON:0001774,5.42e-15,1;UBERON:0001103,5.42e-15,1;UBERON:0010084,5.42e-15,1;UBERON:0007029,8.17e-15,1;UBERON:0000989,2.11e-14,1;UBERON:0008811,2.11e-14,1;UBERON:0006258,2.11e-14,1;UBERON:0005876,2.11e-14,1;UBERON:0004874,2.11e-14,1;UBERON:0001831,2.75e-14,1;UBERON:0001567,2.75e-14,1;UBERON:0008801,2.75e-14,1;UBERON:0005090,3.82e-08,2;UBERON:0001630,3.82e-08,2;UBERON:0000341,4.09e-08,2;UBERON:0003127,5.02e-08,2;UBERON:0001829,8.60e-08,2;UBERON:0004089,8.60e-08,2;UBERON:0008814,3.25e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0,0.964856007391714,0.107420244868274,0.435050081742686,1.53407929348982,7.03353081609225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,183.790281231423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,3.18254701254366,492.921133318735,75.2852039241666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,126.174148675782,0.322944549180031,0.31037357147929,0,0,2.62752345645685,2.8303177226605,106.776789938608,0.0673520530145875,0.502055437748735,15.3023764011166,0,0,0,0,7.03922827210363,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0,0.964856007391714,0.107420244868274,0.435050081742686,1.53407929348982,7.03353081609225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,183.790281231423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,3.18254701254366,492.921133318735,75.2852039241666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,126.174148675782,0.322944549180031,0.31037357147929,0,0,2.62752345645685,2.8303177226605,106.776789938608,0.0673520530145875,0.502055437748735,15.3023764011166,0,0,0,0,7.03922827210363,0,0,0,0,0 | ||
|short_description=p1@MYH8 | |short_description=p1@MYH8 | ||
}} | }} |
Latest revision as of 14:35, 18 September 2015
Short description: | p1@MYH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYH8_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 0bp_to_ENST00000403437, NM_002472, uc002gmm.2_5end |
EntrezGene: | MYH8 |
HGNC: | 7578 |
UniProt: | P13535 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 8.04e-08 | 2 |
cell of skeletal muscle | 9.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 9.50e-19 | 3 |
gustatory system | 9.50e-19 | 3 |
future tongue | 9.50e-19 | 3 |
chest muscle | 5.42e-15 | 1 |
respiratory system muscle | 5.42e-15 | 1 |
skeletal muscle of trunk | 5.42e-15 | 1 |
respiratory system skeletal muscle | 5.42e-15 | 1 |
thoracic segment muscle | 5.42e-15 | 1 |
chest organ | 5.42e-15 | 1 |
muscle of trunk | 5.42e-15 | 1 |
diaphragm | 5.42e-15 | 1 |
future diaphragm | 5.42e-15 | 1 |
surface | 8.17e-15 | 1 |
penis | 2.11e-14 | 1 |
intromittent organ | 2.11e-14 | 1 |
lateral plate mesenchyme | 2.11e-14 | 1 |
undifferentiated genital tubercle | 2.11e-14 | 1 |
somatopleure | 2.11e-14 | 1 |
parotid gland | 2.75e-14 | 1 |
cheek | 2.75e-14 | 1 |
parotid gland primordium | 2.75e-14 | 1 |
muscle structure | 3.82e-08 | 2 |
muscle organ | 3.82e-08 | 2 |
throat | 4.09e-08 | 2 |
open tracheal system trachea | 5.02e-08 | 2 |
major salivary gland | 8.60e-08 | 2 |
midface | 8.60e-08 | 2 |
pharyngeal arch system | 3.25e-07 | 18 |