FFCP PHASE1:Hg19::chr1:55446510..55446545,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=199964 | |EntrezGene=199964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27296 | |HGNC=27296 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0U2 | |UniProt=Q8N0U2 | ||
|association_with_transcript=45bp_to_ENST00000371268,NM_182532,uc001cyd.2_5end | |association_with_transcript=45bp_to_ENST00000371268,NM_182532,uc001cyd.2_5end | ||
|cluster_id=chr1:55446510..55446545,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_4_at_TMEM61_5end | |description=CAGE_peak_4_at_TMEM61_5end | ||
|id=chr1:55446510..55446545,+ | |id=chr1:55446510..55446545,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.07e-23;1!CL:0000164;1.07e-23;1!CL:0000502;1.07e-23;1!CL:0000172;1.07e-23;1!CL:0000173;1.07e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.07e-23,1;CL:0000164,1.07e-23,1;CL:0000502,1.07e-23,1;CL:0000172,1.07e-23,1;CL:0000173,1.07e-23,1;CL:0002351,1.07e-23,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.07e-23;1!UBERON:0008801;1.67e-23;1!UBERON:0006298;4.59e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.07e-23;1!DOID:5409;8.14e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.07e-23,1;DOID:5409,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-19!115;UBERON:0003076!2.20e-12!15;UBERON:0003057!2.20e-12!15;UBERON:0004733!1.36e-11!12;UBERON:0002028!1.36e-11!12;UBERON:0007277!1.36e-11!12;UBERON:0004732!1.19e-10!13;UBERON:0001829!8.92e-10!2;UBERON:0002298!3.08e-08!8;UBERON:0002680!1.80e-07!9;UBERON:0001895!1.80e-07!9;UBERON:0010092!1.80e-07!9;UBERON:0001044!4.23e-07!6;UBERON:0003293!4.23e-07!6;UBERON:0003294!4.23e-07!6;UBERON:0010047!4.23e-07!6;UBERON:0000167!4.23e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.09e-44;2!UBERON:0001044;1.39e-33;6!UBERON:0003293;1.39e-33;6!UBERON:0003294;1.39e-33;6!UBERON:0010047;1.39e-33;6!UBERON:0003408;1.39e-33;6!UBERON:0000167;1.39e-33;6!UBERON:0001831;1.67e-23;1!UBERON:0001567;1.67e-23;1!UBERON:0001736;4.59e-23;1!UBERON:0004921;1.96e-15;33!UBERON:0001041;7.51e-15;14!UBERON:0004089;1.85e-12;2!UBERON:0000007;3.06e-12;2!UBERON:0000161;4.00e-11;19!UBERON:0000166;4.00e-11;19!UBERON:0001155;1.12e-10;9!UBERON:0000059;6.61e-09;11!UBERON:0000165;9.54e-08;28!UBERON:0002365;6.38e-07;31!UBERON:0002330;6.38e-07;31!UBERON:0003296;9.36e-07;4!UBERON:0010133;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.79e-45,2;UBERON:0001044,1.31e-33,6;UBERON:0003293,1.31e-33,6;UBERON:0003294,1.31e-33,6;UBERON:0010047,1.31e-33,6;UBERON:0000167,1.31e-33,6;UBERON:0001831,1.67e-23,1;UBERON:0001567,1.67e-23,1;UBERON:0008801,1.67e-23,1;UBERON:0001736,4.10e-23,1;UBERON:0006298,4.10e-23,1;UBERON:0003408,1.67e-20,10;UBERON:0004089,1.85e-12,2;UBERON:0000007,3.62e-12,2;UBERON:0001155,1.07e-10,9;UBERON:0000166,1.06e-09,22;UBERON:0000059,6.35e-09,11;UBERON:0000165,1.67e-07,29;UBERON:0000930,1.67e-07,29;UBERON:0002365,4.67e-07,31;UBERON:0002330,4.67e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.341380344856499,0.508507300585533,0,0,0,0,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,4.38606213485746,0.496211178389294,0,0,0,0.336283722218824,0,1.13831095675649,0,0,0,0.679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01159151174194,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,2.8682940277668,0.463044948647668,0.218559560503957,6.1141248526998,0.490296643507811,9.66273843116666,0.588925401344836,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.341380344856499,0.508507300585533,0,0,0,0,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,4.38606213485746,0.496211178389294,0,0,0,0.336283722218824,0,1.13831095675649,0,0,0,0.679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01159151174194,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,2.8682940277668,0.463044948647668,0.218559560503957,6.1141248526998,0.490296643507811,9.66273843116666,0.588925401344836,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@TMEM61 | |short_description=p4@TMEM61 | ||
}} | }} |
Latest revision as of 15:23, 18 September 2015
Short description: | p4@TMEM61 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM61_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 45bp_to_ENST00000371268, NM_182532, uc001cyd.2_5end |
EntrezGene: | TMEM61 |
HGNC: | 27296 |
UniProt: | Q8N0U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.07e-23 | 1 |
enteroendocrine cell | 1.07e-23 | 1 |
type D enteroendocrine cell | 1.07e-23 | 1 |
somatostatin secreting cell | 1.07e-23 | 1 |
pancreatic D cell | 1.07e-23 | 1 |
progenitor cell of endocrine pancreas | 1.07e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 9.79e-45 | 2 |
saliva-secreting gland | 1.31e-33 | 6 |
gland of oral region | 1.31e-33 | 6 |
gland of foregut | 1.31e-33 | 6 |
oral gland | 1.31e-33 | 6 |
oral cavity | 1.31e-33 | 6 |
parotid gland | 1.67e-23 | 1 |
cheek | 1.67e-23 | 1 |
parotid gland primordium | 1.67e-23 | 1 |
submandibular gland | 4.10e-23 | 1 |
submandibular gland primordium | 4.10e-23 | 1 |
gland of gut | 1.67e-20 | 10 |
midface | 1.85e-12 | 2 |
pituitary gland | 3.62e-12 | 2 |
colon | 1.07e-10 | 9 |
oral opening | 1.06e-09 | 22 |
large intestine | 6.35e-09 | 11 |
mouth | 1.67e-07 | 29 |
stomodeum | 1.67e-07 | 29 |
exocrine gland | 4.67e-07 | 31 |
exocrine system | 4.67e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.07e-23 | 1 |
lung small cell carcinoma | 8.14e-07 | 4 |