FFCP PHASE1:Hg19::chr2:85641172..85641183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=822 | |EntrezGene=822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1474 | |HGNC=1474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc010fgi.1_5end | |association_with_transcript=-2bp_to_uc010fgi.1_5end | ||
|cluster_id=chr2:85641172..85641183,- | |||
|description=CAGE_peak_3_at_CAPG_5end | |description=CAGE_peak_3_at_CAPG_5end | ||
|id=chr2:85641172..85641183,- | |id=chr2:85641172..85641183,- | ||
|ontology_enrichment_celltype=CL:0000349;2.34e-08;19!CL:1000449;1.09e-07;15!CL:0002681;4.07e-07;12!CL:0002584;4.07e-07;12!CL:0002202;4.18e-07;9!CL:0002632;4.18e-07;9!CL:1000497;7.23e-07;17!CL:0002518;7.23e-07;17 | |ontology_enrichment_celltype=CL:0000012!7.31e-17!682;CL:0000548!4.22e-16!679;CL:0000004!4.22e-16!679;CL:0000255!4.22e-16!679;CL:0000144!4.72e-15!625;CL:0002371!4.41e-13!591;CL:0002321!4.53e-13!248;CL:0000220!5.47e-13!246;CL:0000066!8.14e-12!254;CL:0000055!1.33e-10!180;CL:0000003!5.22e-10!722;CL:0000222!2.15e-09!119;CL:1000449!4.82e-07!16;CL:1000507!6.95e-07!12;CL:1000494!6.95e-07!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;2.34e-08;19!CL:1000449;1.09e-07;15!CL:0002681;4.07e-07;12!CL:0002584;4.07e-07;12!CL:0002202;4.18e-07;9!CL:0002632;4.18e-07;9!CL:1000497;7.23e-07;17!CL:0002518;7.23e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.05e-14,250;CL:0000066,1.18e-09,253;CL:0000222,7.98e-09,121;CL:0000349,2.37e-08,19;CL:1000449,1.56e-07,15;CL:0002202,4.95e-07,9;CL:0002632,4.95e-07,9;CL:0002681,5.94e-07,12;CL:0002584,5.94e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0006555;1.09e-07;15!UBERON:0004819;1.09e-07;15!UBERON:0001285;1.09e-07;15!UBERON:0007684;1.09e-07;15!UBERON:0007196;1.68e-07;15!UBERON:0001558;1.68e-07;15!UBERON:0000353;3.34e-07;15!UBERON:0001225;4.07e-07;12!UBERON:0008987;4.07e-07;12 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.54e-07!82;UBERON:0005085!1.75e-07!29;UBERON:0000464!2.63e-07!104;UBERON:0004211!4.82e-07!16;UBERON:0001285!4.82e-07!16;UBERON:0007684!4.82e-07!16;UBERON:0003220!4.82e-07!16;UBERON:0004208!4.82e-07!16;UBERON:0001048!6.33e-07!168;UBERON:0000914!6.67e-07!83;UBERON:0002329!6.67e-07!83;UBERON:0003077!6.67e-07!83;UBERON:0003059!6.67e-07!83;UBERON:0007282!6.67e-07!83;UBERON:0009618!6.67e-07!83;UBERON:0007285!6.67e-07!83;UBERON:0009773!6.95e-07!12;UBERON:0001231!6.95e-07!12;UBERON:0004810!6.95e-07!12;UBERON:0000468!7.62e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.09e-07;15!UBERON:0004819;1.09e-07;15!UBERON:0001285;1.09e-07;15!UBERON:0007684;1.09e-07;15!UBERON:0007196;1.68e-07;15!UBERON:0001558;1.68e-07;15!UBERON:0000353;3.34e-07;15!UBERON:0001225;4.07e-07;12!UBERON:0008987;4.07e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.15e-07,15;UBERON:0001558,1.15e-07,15;UBERON:0004211,1.56e-07,15;UBERON:0009773,1.56e-07,15;UBERON:0001231,1.56e-07,15;UBERON:0001285,1.56e-07,15;UBERON:0007684,1.56e-07,15;UBERON:0004208,1.56e-07,15;UBERON:0000486,1.79e-07,83;UBERON:0005085,3.31e-07,31;UBERON:0000353,3.67e-07,15;UBERON:0001225,5.94e-07,12;UBERON:0008987,5.94e-07,12;UBERON:0007503,9.69e-07,78 | |||
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|phase1_expression=0.726713517082227,0.856402095563933,0.563817616383885,0,0,0,0,0,0.522371256399677,3.44027511102112,8.37361401566913,2.83973783769224,8.44054330331051,3.83675694176145,6.95934489028623,0,1.20538905604795,1.46062018077475,2.43966399395253,5.0479633811483,12.0360407834109,5.32873026512749,3.72106783270374,1.91624195102038,4.77062030460251,0,0,0,0,0,0.309632246632152,7.35536979583142,6.32532429434325,9.24385025416969,0,0,2.34880351467878,0,0.401088894940283,0,0.895661896959697,1.6194683300949,1.80302897343931,0.436194716338694,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0,0,0.47296445977717,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0,0,1.75996244461323,2.18455444504853,0.889509253863555,0,0.400395987036012,1.14950487990897,0,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,2.64342657158052,1.12101712596307,1.58030450865046,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.639312809217652,0.722878304769133,1.50401373190767,2.17269778441236,0.795285947051099,0.486634870302636,2.6469748805939,2.4390233720882,2.3715392137144,0.654895377488563,9.4716774956061,3.33705998505986,2.27183175558278,1.56716763569341,3.85578085504709,0.715471872916026,1.14398982156026,1.48583000531826,1.98762407366705,3.4409383804245,1.73570250803797,0,2.09749718104953,0.825354125820202,0.835979866147242,2.32575083252396,1.06729878806013,0.66944122552934,1.61131726843659,2.28081631715554,2.68468263302986,3.30896772311282,3.24056779152704,1.16089646769304,2.02076435363553,1.0135033243499,3.06633274931766,0.949265659568129,2.5648244150257,0,0,6.97750483428055,2.48485975847659,0.633152558322899,0.529636723252875,0.573673241497627,1.77334191099179,1.68203280042692,2.1349799145941,1.2333377420858,0.311211035399766,1.48181739276657,0.817309515567294,2.27036141467397,2.30470369792,3.74914290934075,2.18512053781224,3.99330275081114,2.39117888882882,1.87895197830024,2.75184005425824,1.40450806702248,2.04154171254893,1.96534907698829,2.27316718586684,0,0.989067717114227,0,2.87447256726495,2.02003336744879,1.62654075833553,0.277064115484183,0.877955241761676,2.45190236639216,1.20190447125277,2.04177929688038,1.4351170855109,0.640672166455702,1.69545520927649,2.70081986475962,1.8549455262919,1.8034837803194,1.48893485065272,0.506328996723799,1.16924406193438,2.52433774244115,1.01254888506529,2.10139873864455,1.42003837006646,2.82105875037393,1.86516651541536,3.47869535693934,3.00020732649918,2.29443676311203,0.975789649036763,1.19276791489337,1.62671520017326,1.86589899027667,1.00928340350251,1.45990943630332,6.25798129319264,3.85944562915731,5.52539685409922,4.64367928031979,2.88751792667834,1.30137480043828,1.68584690078102,0.723033089650446,1.21323370005633,1.30727666455444,0.71181185733329,2.42696354688296,1.37355025587742,1.53898862778556,5.90524363699719,2.80483547606892,4.9388881359768,10.2906097969879,0,0,0,0,0,1.20097467208968,1.97550513735526,5.62008766288098,2.41269533787914,1.48141512253647,1.3032332212413,3.11980435583874,5.77325368101093,3.94163376915261,0.939269553886573,1.01056513432752,0.925971025153221,0.570762456703795,0,0,2.70838706696137,3.97807250736704,4.90482835552803,5.62403003920662,1.84780341018745,1.41775097242386,1.79117045405697,2.3250715081117,4.21720947081732,0,1.93706554829097,1.03664057770386,1.44119953416961,3.7872730027914,0,1.14596527667483,0,0,0.102827492703324,0,1.14330573052231,3.92458795208763,3.48768055066624,0.80672114403045,1.16344544182,14.3062578340753,2.535908257668,0.531876233169741,3.12022310734098,2.05765899409714,4.25547396069835,3.72991050622539,0,3.25572963234866,1.64648067356154,0.65147236858747,0.355391948742546,2.37585561880029,2.41151501647669,0,1.99945982364114,6.08118903205952,3.01354254859276,2.10833939483032,1.91699884393266,2.29723871668228,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0.254094624222463,0,1.54657762555539,1.67516265334349,1.27587750330633,0,0,0,1.47229790062968,4.50153468953709,5.96783052139418,1.45579603071565,1.24900292158013,1.41932173530541,1.17141414992713,3.91229929646035,11.3703752027992,3.10419213877515,1.32845119707087,4.24049087645917,1.82455590382974,6.46143819627044,5.14715135716284,0,0,0.106727557803444,3.63753085735511,8.32177197552485,8.46692821323105,0.248107807818777,0.920771839728375,2.80660094433074,0.640695746278505,1.02341449813341,0.482561763430822,5.93672265779964,0.771048469013278,2.66342587969691,1.56041596426237,3.11552657510173,2.5566283261191,0,2.00506470303285,0.920809889358963,0.803701137152247,1.0925470080403,2.62248829918848,5.41439535488894,2.15642943892361,14.9026456143602,8.76835347919564,0.422206515571503,10.2360045663807,5.4429985688485,1.51141141271498,0,4.06419656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| ||
|short_description=p3@CAPG | |short_description=p3@CAPG | ||
}} | }} |
Latest revision as of 16:15, 18 September 2015
Short description: | p3@CAPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPG_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_uc010fgi.1_5end |
EntrezGene: | CAPG |
HGNC: | 1474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.05e-14 | 250 |
epithelial cell | 1.18e-09 | 253 |
mesodermal cell | 7.98e-09 | 121 |
extraembryonic cell | 2.37e-08 | 19 |
epithelial cell of nephron | 1.56e-07 | 15 |
epithelial cell of tracheobronchial tree | 4.95e-07 | 9 |
epithelial cell of lower respiratory tract | 4.95e-07 | 9 |
kidney cortical cell | 5.94e-07 | 12 |
renal cortical epithelial cell | 5.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.15e-07 | 15 |
lower respiratory tract | 1.15e-07 | 15 |
nephron epithelium | 1.56e-07 | 15 |
renal tubule | 1.56e-07 | 15 |
nephron tubule | 1.56e-07 | 15 |
nephron | 1.56e-07 | 15 |
uriniferous tubule | 1.56e-07 | 15 |
nephrogenic mesenchyme | 1.56e-07 | 15 |
multilaminar epithelium | 1.79e-07 | 83 |
ectodermal placode | 3.31e-07 | 31 |
parenchyma | 3.67e-07 | 15 |
cortex of kidney | 5.94e-07 | 12 |
renal parenchyma | 5.94e-07 | 12 |
epithelial vesicle | 9.69e-07 | 78 |