FFCP PHASE1:Hg19::chr14:104394760..104394768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122402 | |EntrezGene=122402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20122 | |HGNC=20122 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDG6 | |UniProt=Q8NDG6 | ||
|association_with_transcript=-30bp_to_ENST00000409874_5end | |association_with_transcript=-30bp_to_ENST00000409874_5end | ||
|cluster_id=chr14:104394760..104394768,+ | |||
|coexpression_cluster_id=C3397 | |coexpression_cluster_id=C3397 | ||
|description=CAGE_peak_4_at_TDRD9_5end | |description=CAGE_peak_4_at_TDRD9_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.43e-09;2 | |ontology_enrichment_celltype_v019=CL:0002535;3.43e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.43e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.58e-14;10!UBERON:0005564;1.58e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.58e-14;10!UBERON:0005564;1.58e-14;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;6.42e-09;2 | |ontology_enrichment_disease_v019=DOID:4929;6.42e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,5.08e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-11!115;UBERON:0003075!5.78e-10!86;UBERON:0007284!5.78e-10!86;UBERON:0002298!1.11e-09!8;UBERON:0001049!2.29e-09!57;UBERON:0005068!2.29e-09!57;UBERON:0006241!2.29e-09!57;UBERON:0007135!2.29e-09!57;UBERON:0002346!3.55e-09!90;UBERON:0002616!7.43e-09!59;UBERON:0003056!2.83e-07!61;UBERON:0003080!2.86e-07!42;UBERON:0001893!3.25e-07!34;UBERON:0000062!3.61e-07!511;UBERON:0005743!7.85e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.91e-11!115;UBERON:0003075!5.78e-10!86;UBERON:0007284!5.78e-10!86;UBERON:0002298!1.11e-09!8;UBERON:0001049!2.29e-09!57;UBERON:0005068!2.29e-09!57;UBERON:0006241!2.29e-09!57;UBERON:0007135!2.29e-09!57;UBERON:0002346!3.55e-09!90;UBERON:0002616!7.43e-09!59;UBERON:0003056!2.83e-07!61;UBERON:0003080!2.86e-07!42;UBERON:0001893!3.25e-07!34;UBERON:0000062!3.61e-07!511;UBERON:0005743!7.85e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;3.63e-21;2!UBERON:0000473;5.41e-18;8!UBERON:0004913;1.65e-16;1!UBERON:0003703;1.65e-16;1!UBERON:0001174;1.65e-16;1!UBERON:0004914;1.65e-16;1!UBERON:0003135;2.89e-13;11!UBERON:0002108;4.12e-13;4!UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2!UBERON:0001905;6.42e-09;2!UBERON:0002757;6.42e-09;2!UBERON:0010134;6.42e-09;2!UBERON:0005408;6.42e-09;2!UBERON:0001899;6.42e-09;2!UBERON:0000991;3.24e-07;21!UBERON:0003101;6.55e-07;22!UBERON:0000079;6.55e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002114;3.63e-21;2!UBERON:0000473;5.41e-18;8!UBERON:0004913;1.65e-16;1!UBERON:0003703;1.65e-16;1!UBERON:0001174;1.65e-16;1!UBERON:0004914;1.65e-16;1!UBERON:0003135;2.89e-13;11!UBERON:0002108;4.12e-13;4!UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2!UBERON:0001905;6.42e-09;2!UBERON:0002757;6.42e-09;2!UBERON:0010134;6.42e-09;2!UBERON:0005408;6.42e-09;2!UBERON:0001899;6.42e-09;2!UBERON:0000991;3.24e-07;21!UBERON:0003101;6.55e-07;22!UBERON:0000079;6.55e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,3.63e-21,2;UBERON:0000473,5.91e-18,8;UBERON:0004913,1.04e-16,1;UBERON:0003703,1.04e-16,1;UBERON:0001174,1.04e-16,1;UBERON:0004914,1.04e-16,1;UBERON:0003135,3.07e-13,11;UBERON:0002108,4.13e-13,4;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2;UBERON:0001905,8.74e-09,2;UBERON:0002757,8.74e-09,2;UBERON:0010134,8.74e-09,2;UBERON:0005408,8.74e-09,2;UBERON:0001899,8.74e-09,2;UBERON:0000991,3.35e-07,21;UBERON:0009196,3.35e-07,21;UBERON:0009117,3.35e-07,21;UBERON:0005564,3.35e-07,21;UBERON:0004176,6.75e-07,22;UBERON:0003101,6.75e-07,22;UBERON:0000079,6.75e-07,22 | |||
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| ||
|short_description=p4@TDRD9 | |short_description=p4@TDRD9 | ||
}} | }} |
Latest revision as of 16:33, 18 September 2015
Short description: | p4@TDRD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TDRD9_5end |
Coexpression cluster: | C3397_epidermoid_testis_transitionalcell_large_argyrophil_testicular_papillotubular |
Association with transcript: | -30bp_to_ENST00000409874_5end |
EntrezGene: | TDRD9 |
HGNC: | 20122 |
UniProt: | Q8NDG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
duodenum | 3.63e-21 | 2 |
testis | 5.91e-18 | 8 |
hepatopancreatic ampulla | 1.04e-16 | 1 |
extrahepatic bile duct | 1.04e-16 | 1 |
common bile duct | 1.04e-16 | 1 |
duodenal papilla | 1.04e-16 | 1 |
male reproductive organ | 3.07e-13 | 11 |
small intestine | 4.13e-13 | 4 |
uterine epithelium | 3.43e-09 | 2 |
cervix epithelium | 3.43e-09 | 2 |
pineal body | 8.74e-09 | 2 |
regional part of epithalamus | 8.74e-09 | 2 |
secretory circumventricular organ | 8.74e-09 | 2 |
circumventricular organ | 8.74e-09 | 2 |
epithalamus | 8.74e-09 | 2 |
gonad | 3.35e-07 | 21 |
indifferent external genitalia | 3.35e-07 | 21 |
indifferent gonad | 3.35e-07 | 21 |
gonad primordium | 3.35e-07 | 21 |
external genitalia | 6.75e-07 | 22 |
male organism | 6.75e-07 | 22 |
male reproductive system | 6.75e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.08e-09 | 2 |