FFCP PHASE1:Hg19::chr14:104394868..104394874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122402 | |EntrezGene=122402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20122 | |HGNC=20122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-279bp_to_ENST00000496087_5end | |association_with_transcript=-279bp_to_ENST00000496087_5end | ||
|cluster_id=chr14:104394868..104394874,+ | |||
|coexpression_cluster_id=C3397 | |||
|description=CAGE_peak_5_at_TDRD9_5end | |description=CAGE_peak_5_at_TDRD9_5end | ||
|id=chr14:104394868..104394874,+ | |id=chr14:104394868..104394874,+ | ||
|ontology_enrichment_celltype=CL:0002535!1.64e-12!2;CL:0002150!8.00e-08!3;CL:0000861!8.00e-08!3 | |ontology_enrichment_celltype=CL:0002535!1.64e-12!2;CL:0002150!8.00e-08!3;CL:0000861!8.00e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.25e-130;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,8.99e-131,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.93e-08;10!UBERON:0005564;5.93e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;3.28e-53;5!DOID:120;6.73e-11;27!DOID:193;3.17e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.87e-53,5;DOID:120,6.56e-11,27;DOID:193,3.10e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.36e-17!8;UBERON:0006955!1.64e-12!2;UBERON:0004801!1.64e-12!2;UBERON:0003135!2.32e-12!11;UBERON:0002134!6.80e-07!1;UBERON:0005208!6.80e-07!1;UBERON:0005946!6.80e-07!1;UBERON:0005965!6.80e-07!1;UBERON:0002078!6.80e-07!1;UBERON:0000998!8.49e-07!1;UBERON:0006868!8.49e-07!1 | |ontology_enrichment_uberon=UBERON:0000473!4.36e-17!8;UBERON:0006955!1.64e-12!2;UBERON:0004801!1.64e-12!2;UBERON:0003135!2.32e-12!11;UBERON:0002134!6.80e-07!1;UBERON:0005208!6.80e-07!1;UBERON:0005946!6.80e-07!1;UBERON:0005965!6.80e-07!1;UBERON:0002078!6.80e-07!1;UBERON:0000998!8.49e-07!1;UBERON:0006868!8.49e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.25e-130;2!UBERON:0004801;1.25e-130;2!UBERON:0000002;1.36e-44;6!UBERON:0001560;1.36e-44;6!UBERON:0000995;1.32e-16;17!UBERON:0003975;9.40e-16;18!UBERON:0003133;1.06e-14;44!UBERON:0004175;1.12e-13;21!UBERON:0000473;1.30e-09;8!UBERON:0003134;2.85e-09;33!UBERON:0005156;3.03e-09;59!UBERON:0000990;3.03e-09;59!UBERON:0000474;2.27e-08;37!UBERON:0003135;2.40e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,8.99e-131,2;UBERON:0004801,8.99e-131,2;UBERON:0000002,1.22e-44,6;UBERON:0001560,1.22e-44,6;UBERON:0000995,1.09e-13,21;UBERON:0003133,2.00e-13,48;UBERON:0005795,4.01e-13,22;UBERON:0003975,4.01e-13,22;UBERON:0004175,1.09e-11,25;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0000473,1.35e-09,8;UBERON:0003134,2.92e-08,37;UBERON:0000474,2.92e-08,37;UBERON:0003100,1.47e-07,41;UBERON:0003135,2.47e-07,11 | |||
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|short_description=p5@TDRD9 | |short_description=p5@TDRD9 | ||
}} | }} |
Latest revision as of 16:36, 18 September 2015
Short description: | p5@TDRD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TDRD9_5end |
Coexpression cluster: | C3397_epidermoid_testis_transitionalcell_large_argyrophil_testicular_papillotubular |
Association with transcript: | -279bp_to_ENST00000496087_5end |
EntrezGene: | TDRD9 |
HGNC: | 20122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 8.99e-131 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 8.99e-131 | 2 |
cervix epithelium | 8.99e-131 | 2 |
uterine cervix | 1.22e-44 | 6 |
neck of organ | 1.22e-44 | 6 |
uterus | 1.09e-13 | 21 |
reproductive organ | 2.00e-13 | 48 |
embryonic uterus | 4.01e-13 | 22 |
internal female genitalia | 4.01e-13 | 22 |
internal genitalia | 1.09e-11 | 25 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
testis | 1.35e-09 | 8 |
female reproductive organ | 2.92e-08 | 37 |
female reproductive system | 2.92e-08 | 37 |
female organism | 1.47e-07 | 41 |
male reproductive organ | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.87e-53 | 5 |
female reproductive organ cancer | 6.56e-11 | 27 |
reproductive organ cancer | 3.10e-10 | 29 |