FFCP PHASE1:Hg19::chr5:74062867..74062912,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:74062867..74062912,-
|short_description=p2@GFM2
|description=CAGE_peak_2_at_GFM2_5end
|association_with_transcript=0bp_to_ENST00000509097_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84340 | |EntrezGene=84340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29682 | |HGNC=29682 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAL1 | |UniProt=D6RAL1 | ||
|association_with_transcript=0bp_to_ENST00000509097_5end | |||
|cluster_id=chr5:74062867..74062912,- | |||
|description=CAGE_peak_2_at_GFM2_5end | |||
|id=chr5:74062867..74062912,- | |||
|ontology_enrichment_celltype=CL:0000066!2.81e-19!254;CL:0002076!3.45e-12!43;CL:0000223!1.22e-11!59;CL:0000945!3.48e-07!24;CL:0000826!3.48e-07!24;CL:0002251!9.12e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.80e-09;42!CL:0000945;3.77e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.70e-20,253;CL:0002076,6.28e-12,42;CL:0000223,2.00e-11,58;CL:0000945,3.47e-07,24;CL:0000826,3.47e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.08e-27!239;DOID:162!4.25e-27!235;DOID:0050687!6.88e-24!143;DOID:305!1.84e-23!106;DOID:0050686!2.70e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:305;2.03e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.62e-27,239;DOID:162,5.00e-27,235;DOID:0050687,7.53e-24,143;DOID:305,2.01e-23,106;DOID:0050686,2.96e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.96e-07!169;UBERON:0000925!7.96e-07!169;UBERON:0006595!7.96e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.24e-07,20 | |||
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| ||
|short_description=p2@GFM2 | |||
}} | }} |
Latest revision as of 16:47, 18 September 2015
Short description: | p2@GFM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GFM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509097_5end |
EntrezGene: | GFM2 |
HGNC: | 29682 |
UniProt: | D6RAL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.70e-20 | 253 |
endo-epithelial cell | 6.28e-12 | 42 |
endodermal cell | 2.00e-11 | 58 |
lymphocyte of B lineage | 3.47e-07 | 24 |
pro-B cell | 3.47e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.24e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.62e-27 | 239 |
cancer | 5.00e-27 | 235 |
cell type cancer | 7.53e-24 | 143 |
carcinoma | 2.01e-23 | 106 |
organ system cancer | 2.96e-07 | 137 |