FFCP PHASE1:Hg19::chr10:62538228..62538244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=983 | |EntrezGene=983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1722 | |HGNC=1722 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000448257_5end | |association_with_transcript=-6bp_to_ENST00000448257_5end | ||
|cluster_id=chr10:62538228..62538244,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_CDK1_5end | |description=CAGE_peak_1_at_CDK1_5end | ||
Latest revision as of 17:08, 18 September 2015
| Short description: | p1@CDK1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CDK1_5end |
| Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
| Association with transcript: | -6bp_to_ENST00000448257_5end |
| EntrezGene: | CDK1 |
| HGNC: | 1722 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CDK1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.95e-19 | 253 |
| embryonic cell | 2.13e-07 | 250 |
| neural cell | 5.65e-07 | 25 |
| neurectodermal cell | 7.57e-07 | 59 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 4.85e-58 | 235 |
| disease of cellular proliferation | 4.86e-57 | 239 |
| organ system cancer | 1.24e-28 | 137 |
| cell type cancer | 4.01e-28 | 143 |
| carcinoma | 2.35e-23 | 106 |
| hematologic cancer | 2.17e-21 | 51 |
| immune system cancer | 2.17e-21 | 51 |
| leukemia | 9.73e-17 | 39 |
| myeloid leukemia | 1.80e-12 | 31 |
| disease of anatomical entity | 2.18e-07 | 39 |
Showing 1 to 10 of 10 entries
