FFCP PHASE1:Hg19::chr6:41006941..41006968,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:41006941..41006968,- to FFCP PHASE1:Hg19::chr6:41006941..41006968,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222643 | |EntrezGene=222643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21203 | |HGNC=21203 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV45 | |UniProt=Q8IV45 | ||
|association_with_transcript=-3bp_to_NM_173561_5end | |||
|cluster_id=chr6:41006941..41006968,- | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_1_at_UNC5CL_5end | |||
|id=chr6:41006941..41006968,- | |||
|ontology_enrichment_celltype=CL:1000507!2.49e-10!12;CL:1000494!2.49e-10!12;CL:0000223!4.96e-10!59;CL:0000181!2.99e-08!12;CL:0000417!2.99e-08!12;CL:0000668!2.99e-08!12;CL:0000414!2.99e-08!12;CL:0000412!2.99e-08!12;CL:0000182!2.99e-08!12;CL:1000497!3.85e-08!18;CL:0002518!3.85e-08!18;CL:0000066!1.56e-07!254;CL:1000449!2.35e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.29e-09;10!CL:1000494;2.29e-09;10!CL:1000497;2.92e-08;17!CL:0002518;2.92e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.24e-09,10;CL:1000494,2.24e-09,10;CL:1000497,2.92e-08,17;CL:0002518,2.92e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.29e-07;1!UBERON:0000358;4.60e-07;1 | |||
|ontology_enrichment_disease=DOID:299!1.05e-10!25;DOID:305!1.80e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.28e-16!55;UBERON:0005173!1.28e-16!55;UBERON:0004921!6.57e-15!129;UBERON:0004185!6.57e-15!129;UBERON:0002417!2.67e-14!61;UBERON:0000916!2.67e-14!61;UBERON:0005177!1.05e-13!107;UBERON:0004119!1.18e-13!169;UBERON:0000925!1.18e-13!169;UBERON:0006595!1.18e-13!169;UBERON:0009856!3.04e-13!26;UBERON:0001007!3.45e-13!155;UBERON:0001555!3.45e-13!155;UBERON:0007026!3.45e-13!155;UBERON:0009854!4.05e-13!23;UBERON:0005409!4.54e-13!35;UBERON:0009497!5.11e-12!25;UBERON:0000015!5.11e-12!25;UBERON:0002423!5.11e-12!25;UBERON:0006235!5.11e-12!25;UBERON:0004161!5.11e-12!25;UBERON:0007499!5.53e-12!25;UBERON:0008835!8.12e-12!22;UBERON:0003894!8.12e-12!22;UBERON:0000466!1.11e-10!126;UBERON:0003929!1.49e-10!54;UBERON:0000160!2.41e-10!27;UBERON:0009773!2.49e-10!12;UBERON:0001231!2.49e-10!12;UBERON:0004810!2.49e-10!12;UBERON:0000077!5.30e-10!130;UBERON:0002107!5.49e-10!19;UBERON:0006925!5.49e-10!19;UBERON:0008836!5.49e-10!19;UBERON:0009569!9.20e-10!113;UBERON:0005911!2.31e-09!82;UBERON:0000058!4.30e-09!26;UBERON:0002113!4.33e-09!27;UBERON:0003918!4.33e-09!27;UBERON:0005095!4.33e-09!27;UBERON:0007687!4.33e-09!27;UBERON:0006555!1.19e-08!17;UBERON:0005103!1.19e-08!17;UBERON:0000083!1.19e-08!17;UBERON:0009201!1.19e-08!17;UBERON:0004819!1.19e-08!17;UBERON:0006553!1.19e-08!17;UBERON:0003074!1.19e-08!17;UBERON:0003060!1.19e-08!17;UBERON:0000949!2.27e-08!45;UBERON:0001041!2.90e-08!98;UBERON:0003887!4.05e-08!21;UBERON:0000080!4.59e-08!18;UBERON:0002120!4.59e-08!18;UBERON:0004875!4.59e-08!18;UBERON:0005721!4.59e-08!18;UBERON:0005754!4.59e-08!18;UBERON:0007297!4.59e-08!18;UBERON:0005057!5.28e-08!26;UBERON:0002368!1.22e-07!35;UBERON:0003104!1.59e-07!238;UBERON:0009142!1.59e-07!238;UBERON:0004211!2.35e-07!16;UBERON:0001285!2.35e-07!16;UBERON:0007684!2.35e-07!16;UBERON:0003220!2.35e-07!16;UBERON:0004208!2.35e-07!16;UBERON:0000481!2.81e-07!347;UBERON:0006554!2.93e-07!44;UBERON:0000489!3.17e-07!32;UBERON:0004876!4.50e-07!20;UBERON:0001008!5.08e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.42e-19;22!UBERON:0000160;1.43e-15;17!UBERON:0005172;8.92e-14;52!UBERON:0005173;8.92e-14;52!UBERON:0002108;6.08e-12;4!UBERON:0004921;1.79e-11;33!UBERON:0002113;3.92e-11;24!UBERON:0011143;3.92e-11;24!UBERON:0002423;4.49e-11;25!UBERON:0002107;4.84e-11;19!UBERON:0006925;4.84e-11;19!UBERON:0004211;2.29e-09;10!UBERON:0009773;2.29e-09;10!UBERON:0001231;2.29e-09;10!UBERON:0004810;2.29e-09;10!UBERON:0002417;4.28e-09;58!UBERON:0000916;4.28e-09;58!UBERON:0000489;4.58e-09;29!UBERON:0006554;9.80e-09;30!UBERON:0001008;9.80e-09;30!UBERON:0001007;9.81e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.66e-19,54;UBERON:0005173,9.66e-19,54;UBERON:0005409,3.81e-17,25;UBERON:0002417,1.40e-16,60;UBERON:0000916,1.40e-16,60;UBERON:0000160,1.33e-15,17;UBERON:0002108,6.08e-12,4;UBERON:0005177,1.00e-11,101;UBERON:0009497,4.49e-11,25;UBERON:0000015,4.49e-11,25;UBERON:0002423,4.49e-11,25;UBERON:0006235,4.49e-11,25;UBERON:0004161,4.49e-11,25;UBERON:0002107,4.88e-11,19;UBERON:0006925,4.88e-11,19;UBERON:0008836,4.88e-11,19;UBERON:0007499,5.10e-11,25;UBERON:0009856,1.46e-10,26;UBERON:0002113,3.28e-10,26;UBERON:0003918,3.28e-10,26;UBERON:0011143,3.28e-10,26;UBERON:0005095,3.28e-10,26;UBERON:0007687,3.28e-10,26;UBERON:0004921,1.51e-09,118;UBERON:0008835,1.88e-09,22;UBERON:0003894,1.88e-09,22;UBERON:0004810,2.24e-09,10;UBERON:0009854,5.14e-09,23;UBERON:0009569,7.59e-09,112;UBERON:0000489,2.00e-08,31;UBERON:0001007,2.69e-08,145;UBERON:0001555,2.69e-08,145;UBERON:0007026,2.69e-08,145;UBERON:0004119,3.18e-08,160;UBERON:0000925,3.18e-08,160;UBERON:0006595,3.18e-08,160 | |||
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| ||
|short_description=p1@UNC5CL | |||
}} | }} |
Latest revision as of 17:52, 18 September 2015
Short description: | p1@UNC5CL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UNC5CL_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -3bp_to_NM_173561_5end |
EntrezGene: | UNC5CL |
HGNC: | 21203 |
UniProt: | Q8IV45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.24e-09 | 10 |
nephron tubule epithelial cell | 2.24e-09 | 10 |
kidney cell | 2.92e-08 | 17 |
kidney epithelial cell | 2.92e-08 | 17 |