FFCP PHASE1:Hg19::chr8:63951318..63951334,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8836 | |EntrezGene=8836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4248 | |HGNC=4248 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000518966,ENST00000520609_5end | |association_with_transcript=25bp_to_ENST00000518966,ENST00000520609_5end | ||
|cluster_id=chr8:63951318..63951334,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_2_at_GGH_5end | |description=CAGE_peak_2_at_GGH_5end | ||
|id=chr8:63951318..63951334,- | |id=chr8:63951318..63951334,- | ||
|ontology_enrichment_celltype=CL:0002321!1.27e-07!248;CL:0000220!1.40e-07!246;CL:0000548!1.42e-07!679;CL:0000004!1.42e-07!679;CL:0000255!1.42e-07!679;CL:0000012!4.94e-07!682 | |ontology_enrichment_celltype=CL:0002321!1.27e-07!248;CL:0000220!1.40e-07!246;CL:0000548!1.42e-07!679;CL:0000004!1.42e-07!679;CL:0000255!1.42e-07!679;CL:0000012!4.94e-07!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.79e-15!239;DOID:162!3.05e-15!235;DOID:0050686!2.34e-09!137;DOID:2531!2.91e-09!51;DOID:0060083!2.91e-09!51;DOID:1240!4.83e-07!39 | |ontology_enrichment_disease=DOID:14566!1.79e-15!239;DOID:162!3.05e-15!235;DOID:0050686!2.34e-09!137;DOID:2531!2.91e-09!51;DOID:0060083!2.91e-09!51;DOID:1240!4.83e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.18e-10,51;DOID:0060083,6.18e-10,51;DOID:14566,8.33e-10,239;DOID:162,1.36e-09,235;DOID:0050686,3.04e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.17e-08;9!UBERON:0001557;5.17e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.79e-08,9 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,1.95173119516203,0.61560529038394,0.612002073732759,0,9.44578757532487,7.52809337900863,7.65810101528297,1.06978768047132,0.903106483949403,0.865818594450472,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,2.78881922089086,2.41687695228617,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0.755751887377619,0.727752183563449,0,4.11167888021826,1.23882548358041,0.28769239232215,0.512321413058201,0.47296445977717,0,0,1.35426486594342,0,0.545812300115692,1.12361742222542,0,1.28371610830437,0.639337125799041,0,0.797854630486527,0,0,3.97169657283798,1.24564449799115,0,0,0.434377689410233,0.605399502633369,4.41933163185078,1.26584954976354,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.260118695119756,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,3.11964896641424,1.10864698731282,1.22968699970376,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.835979866147242,0.516833518338658,2.13459757612026,0.66944122552934,0.805658634218294,0,1.46437234528902,0,0,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.549605231791222,0,3.87780264148325,0.436094052142534,0,1.77282716330412,0.264818361626438,0.286836620748814,1.06400514659507,0,0,0.74000264525148,0,0,0.490385709340376,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0.469737994575059,0.485618833104395,0.842704840213491,0.408308342509787,0.859840221182376,0.206651562351531,0,0,0,0,0.673344455816265,0.250237039743928,0.554128230968366,0,1.22595118319608,0.300476117813194,2.26864366320042,0,0,0,0.600182192168805,0.206105058476878,0.257640540045629,0,0.843881661206331,0.194874010322397,0.504867548488229,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0.773043412653187,1.09098448236334,0,0.487894824518382,0.265059536642971,0.232387885739037,0.310983165046111,1.51392510525377,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,2.01121560067735,1.51726221070292,1.68707720918437,1.65440959098591,1.08939722046203,1.18635309555548,2.56179485504312,1.76599318612811,1.15424147083917,0,0,0,0,7.60530208930985,24.5706804169407,5.90789906681404,2.20731549707325,4.18160691046586,0.171567810298526,0.109750285408626,0,0.502644862058154,0.0925884451585296,0,1.03993478527958,1.44331342025273,2.08674728955138,0.117408694235822,6.92958949253154,2.31492756288305,5.13686211033415,0,0.858486162094873,0.246217006087397,0.234004265139238,0,4.68669169933885,3.02367830757947,2.26840155587818,0.626909658919938,0.581267877027924,0.383382679165211,0,0.264145302039678,0.207328115540772,0,0,1.07946420296687,0.763976851116555,1.17217447210047,1.71072446022705,0.822619941626588,0.901029173531752,0.285826432630578,0.560655421726804,0.43596006883328,2.4935017179123,0.129271715757778,0,0,0,0,1.02882949704857,1.41849132023278,1.0656887160644,0.857867961948885,0,0.823240336780769,1.30294473717494,0.355391948742546,0,3.01439377059586,4.35766729300147,3.39908170018994,0,0,2.10833939483032,0,0,0,2.02693829334611,1.02738161275192,0.537182889719687,9.97557781542393,0,0.215627574859517,0.256686072559497,0.254094624222463,1.30139853857622,2.31986643833309,1.50764638800914,3.18969375826582,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0.496215615637554,0,0.841980283299221,0.768834895534206,0,0.64341568457443,0,2.62156479464514,1.06537035187876,0.657017248110473,2.07701771673448,1.04589340613963,4.59265908448164,0.200506470303285,0.0920809889358963,1.26295892981067,2.00300284807389,0.262248829918848,0.451199612907412,0.693138033939733,0,0,0.105551628892876,0,0.510281115829547,0.863663664408557,0,0.270946437543853,0,0.509752546090077,0,0.447749509444357,2.85037839639715,0.784306353074702,1.02580050046556,0,0,2.06082023295445,0.640986253728404,1.40266149865,1.14853107599234,0,4.82051789532479,0.290012154876366,0.924291702687866,0.921022048356777,0.964856007391714,0.966782203814463,1.0151168573996,1.61930592090592,0.267096106940212,0.661139661443912,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0.6970372701606,0.924100740528266,0.532306030317022,0,0.18532421910392,0.572499546967965,1.48863347743867,0,0.571890581771475,0.255897791311334,0,0,0,1.43897966066652,0.54907405947211,0.353437207037059,0,0,1.26377536871694,0,0.731140468893853,1.05650146756755,0.682499557039929,0.282810863907425,0,1.65409603063837,0.66343897524122,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| ||
|short_description=p2@GGH | |short_description=p2@GGH | ||
}} | }} |
Latest revision as of 18:26, 18 September 2015
Short description: | p2@GGH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GGH_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 25bp_to_ENST00000518966, ENST00000520609_5end |
EntrezGene: | GGH |
HGNC: | 4248 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.79e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.18e-10 | 51 |
immune system cancer | 6.18e-10 | 51 |
disease of cellular proliferation | 8.33e-10 | 239 |
cancer | 1.36e-09 | 235 |
organ system cancer | 3.04e-07 | 137 |