FFCP PHASE1:Hg19::chr21:45681737..45681760,-: Difference between revisions
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|id=chr21:45681737..45681760,-
|short_description=p2@DNMT3L
|description=CAGE_peak_2_at_DNMT3L_5end
|association_with_transcript=4bp_to_ENST00000431166_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29947 | |EntrezGene=29947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2980 | |HGNC=2980 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0T5 | |UniProt=C9J0T5 | ||
|association_with_transcript=4bp_to_ENST00000431166_5end | |||
|cluster_id=chr21:45681737..45681760,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_2_at_DNMT3L_5end | |||
|id=chr21:45681737..45681760,- | |||
|ontology_enrichment_celltype=CL:0000039!9.38e-58!7;CL:0000586!9.38e-58!7;CL:0002322!2.81e-35!5;CL:0000148!1.78e-10!10;CL:0000541!1.78e-10!10;CL:0000147!1.25e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.28e-101;7!CL:0000586;1.28e-101;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-101,7;CL:0000586,1.28e-101,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.13e-32;10!UBERON:0005564;3.13e-32;10 | |||
|ontology_enrichment_disease=DOID:3095!1.48e-24!22;DOID:2994!1.48e-24!22;DOID:1799!1.11e-12!1;DOID:10165!1.11e-12!1;DOID:1798!1.11e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.05e-44;22!DOID:2994;7.05e-44;22!DOID:1799;3.45e-21;1!DOID:10165;3.45e-21;1!DOID:1798;3.45e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.61e-44,22;DOID:2994,6.61e-44,22;DOID:1799,3.45e-21,1;DOID:10165,3.45e-21,1;DOID:1798,3.45e-21,1;DOID:0050687,1.48e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.67e-23!8;UBERON:0003135!8.58e-17!11;UBERON:0000991!6.70e-09!21;UBERON:0009196!6.70e-09!21;UBERON:0009117!6.70e-09!21;UBERON:0005564!6.70e-09!21;UBERON:0004176!1.67e-08!22;UBERON:0003101!1.67e-08!22;UBERON:0000079!1.67e-08!22;UBERON:0002323!1.95e-08!46;UBERON:0004458!6.81e-08!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.89e-40;8!UBERON:0003135;2.36e-29;11!UBERON:0000991;1.31e-15;21!UBERON:0003101;6.43e-15;22!UBERON:0000079;6.43e-15;22!UBERON:0002323;2.34e-10;45!UBERON:0000922;1.94e-07;49!UBERON:0002553;9.01e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.89e-40,8;UBERON:0003135,2.36e-29,11;UBERON:0000991,1.31e-15,21;UBERON:0009196,1.31e-15,21;UBERON:0009117,1.31e-15,21;UBERON:0005564,1.31e-15,21;UBERON:0004176,6.43e-15,22;UBERON:0003101,6.43e-15,22;UBERON:0000079,6.43e-15,22;UBERON:0002323,5.43e-11,46;UBERON:0004458,2.52e-10,49;UBERON:0003886,2.23e-09,54;UBERON:0002553,2.61e-08,61;UBERON:0003133,5.13e-07,48 | |||
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|short_description=p2@DNMT3L | |||
}} | }} |
Latest revision as of 18:29, 18 September 2015
Short description: | p2@DNMT3L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DNMT3L_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 4bp_to_ENST00000431166_5end |
EntrezGene: | DNMT3L |
HGNC: | 2980 |
UniProt: | C9J0T5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-101 | 7 |
germ cell | 1.28e-101 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.89e-40 | 8 |
male reproductive organ | 2.36e-29 | 11 |
gonad | 1.31e-15 | 21 |
indifferent external genitalia | 1.31e-15 | 21 |
indifferent gonad | 1.31e-15 | 21 |
gonad primordium | 1.31e-15 | 21 |
external genitalia | 6.43e-15 | 22 |
male organism | 6.43e-15 | 22 |
male reproductive system | 6.43e-15 | 22 |
body cavity | 5.43e-11 | 46 |
body cavity or lining | 2.52e-10 | 49 |
body cavity precursor | 2.23e-09 | 54 |
anatomical cavity | 2.61e-08 | 61 |
reproductive organ | 5.13e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.61e-44 | 22 |
germ cell cancer | 6.61e-44 | 22 |
islet cell tumor | 3.45e-21 | 1 |
endocrine pancreas cancer | 3.45e-21 | 1 |
pancreatic endocrine carcinoma | 3.45e-21 | 1 |
cell type cancer | 1.48e-08 | 143 |