FFCP PHASE1:Hg19::chr11:61976154..61976157,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61976154..61976157,+ to FFCP PHASE1:Hg19::chr11:61976154..61976157,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4246 | |EntrezGene=4246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7051 | |HGNC=7051 | ||
|TSSclassifier=strong | |||
|UniProt=O75556 | |UniProt=O75556 | ||
|association_with_transcript=14bp_to_ENST00000244930,NM_002407,uc001nta.2_5end | |||
|cluster_id=chr11:61976154..61976157,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_2_at_SCGB2A1_5end | |||
|id=chr11:61976154..61976157,+ | |||
|ontology_enrichment_celltype=CL:0000242!6.27e-32!2;CL:0000312!2.09e-13!5;CL:0000240!2.49e-11!6;CL:0000311!2.49e-11!6;CL:0000079!2.49e-11!6;CL:0000237!2.49e-11!6;CL:0000036!2.49e-11!6;CL:0000357!2.49e-11!6;CL:0000114!2.49e-11!6;CL:0002535!6.42e-09!2;CL:0000362!1.01e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.38e-79;2!CL:0000242;6.38e-79;2!CL:0000312;2.16e-32;5!CL:0000240;3.32e-27;6!CL:0000311;3.32e-27;6!CL:0000079;3.32e-27;6!CL:0000237;3.32e-27;6!CL:0000362;1.54e-18;9!CL:0002159;2.59e-12;14!CL:0000095;2.41e-09;17!CL:0000039;6.21e-07;7!CL:0000586;6.21e-07;7!CL:0002319;7.34e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.22e-79,2;CL:0000312,1.99e-32,5;CL:0000240,3.11e-27,6;CL:0000311,3.11e-27,6;CL:0000079,3.11e-27,6;CL:0000237,3.11e-27,6;CL:0000036,3.11e-27,6;CL:0000357,3.11e-27,6;CL:0000114,3.11e-27,6;CL:0000362,1.48e-18,9;CL:0002159,2.51e-12,14;CL:0000095,2.36e-09,17;CL:0000123,2.36e-09,17;CL:0000039,6.39e-07,7;CL:0000586,6.39e-07,7;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;3.32e-27;6!CL:0000114;3.32e-27;6 | |||
|ontology_enrichment_disease=DOID:0050619!1.41e-16!1;DOID:1357!1.41e-16!1;DOID:3493!7.49e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.00e-12;14!DOID:305;8.98e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.00e-12,14;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.41e-16!1;UBERON:0001825!1.41e-16!1;UBERON:0006955!6.42e-09!2;UBERON:0004801!6.42e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.46e-11;15!UBERON:0007376;1.46e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.42e-11,15;UBERON:0007376,1.42e-11,15;UBERON:0007383,1.42e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8606373451049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,1.87333962322753,3.18826262943815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,8.55488333193883,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,1.01084389488329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8606373451049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,1.87333962322753,3.18826262943815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,8.55488333193883,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,1.01084389488329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@SCGB2A1 | |||
}} | }} |
Latest revision as of 18:37, 18 September 2015
Short description: | p2@SCGB2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCGB2A1_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 14bp_to_ENST00000244930, NM_002407, uc001nta.2_5end |
EntrezGene: | SCGB2A1 |
HGNC: | 7051 |
UniProt: | O75556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.22e-79 | 2 |
keratinocyte | 1.99e-32 | 5 |
stratified squamous epithelial cell | 3.11e-27 | 6 |
keratin accumulating cell | 3.11e-27 | 6 |
stratified epithelial cell | 3.11e-27 | 6 |
keratinizing barrier epithelial cell | 3.11e-27 | 6 |
epithelial fate stem cell | 3.11e-27 | 6 |
stratified epithelial stem cell | 3.11e-27 | 6 |
surface ectodermal cell | 3.11e-27 | 6 |
epidermal cell | 1.48e-18 | 9 |
general ecto-epithelial cell | 2.51e-12 | 14 |
neuron associated cell | 2.36e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.36e-09 | 17 |
germ line cell | 6.39e-07 | 7 |
germ cell | 6.39e-07 | 7 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.42e-11 | 15 |
outer epithelium | 1.42e-11 | 15 |
enveloping layer of ectoderm | 1.42e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.00e-12 | 14 |
cell type cancer | 1.55e-07 | 143 |