FFCP PHASE1:Hg19::chr21:46334204..46334214,-: Difference between revisions
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|id=chr21:46334204..46334214,-
|short_description=p21@ITGB2
|description=CAGE_peak_21_at_ITGB2_5end
|association_with_transcript=-6bp_to_ENST00000522931_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3689 | |EntrezGene=3689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6155 | |HGNC=6155 | ||
|TSSclassifier=strong | |||
|UniProt=E5RK25 | |UniProt=E5RK25 | ||
|association_with_transcript=-6bp_to_ENST00000522931_5end | |||
|cluster_id=chr21:46334204..46334214,- | |||
|description=CAGE_peak_21_at_ITGB2_5end | |||
|id=chr21:46334204..46334214,- | |||
|ontology_enrichment_celltype=CL:0000838!1.30e-08!52;CL:0000542!2.08e-08!53;CL:0000051!2.08e-08!53;CL:0000037!8.25e-08!172;CL:0000566!8.25e-08!172;CL:0002032!2.19e-07!165;CL:0000837!2.19e-07!165;CL:0000988!3.97e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000771;3.52e-50;2!CL:0000094;1.00e-13;8!CL:0000081;2.27e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.74e-50,2;CL:0000094,9.39e-14,8;CL:0000081,2.16e-10,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.22e-07!10;DOID:2531!3.10e-07!51;DOID:0060083!3.10e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.05e-12!4;UBERON:0005058!8.05e-12!4;UBERON:0009113!8.05e-12!4;UBERON:0003295!8.05e-12!4;UBERON:0005562!8.05e-12!4;UBERON:0003351!5.17e-08!6;UBERON:0005057!7.10e-08!26;UBERON:0001042!8.26e-08!10;UBERON:0009145!8.26e-08!10;UBERON:0006562!4.22e-07!11;UBERON:0004177!6.42e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.52e-50;2!UBERON:0005058;3.52e-50;2!UBERON:0009113;3.52e-50;2!UBERON:0004177;4.66e-21;5!UBERON:0005057;4.66e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.14e-26,4;UBERON:0005058,7.14e-26,4;UBERON:0009113,7.14e-26,4;UBERON:0003295,7.14e-26,4;UBERON:0005562,7.14e-26,4;UBERON:0003351,9.07e-18,6;UBERON:0004177,1.91e-15,7;UBERON:0005057,1.91e-15,7;UBERON:0000974,3.02e-11,10;UBERON:0003408,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
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| ||
|short_description=p21@ITGB2 | |||
}} | }} |
Latest revision as of 19:56, 18 September 2015
Short description: | p21@ITGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ITGB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000522931_5end |
EntrezGene: | ITGB2 |
HGNC: | 6155 |
UniProt: | E5RK25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.74e-50 | 2 |
granulocyte | 9.39e-14 | 8 |
blood cell | 2.16e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.14e-26 | 4 |
hemolymphoid system gland | 7.14e-26 | 4 |
thymic region | 7.14e-26 | 4 |
pharyngeal gland | 7.14e-26 | 4 |
thymus primordium | 7.14e-26 | 4 |
pharyngeal epithelium | 9.07e-18 | 6 |
hemopoietic organ | 1.91e-15 | 7 |
immune organ | 1.91e-15 | 7 |
neck | 3.02e-11 | 10 |
gland of gut | 3.02e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |