FFCP PHASE1:Hg19::chr2:88367368..88367386,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:88367368..88367386,+
|short_description=p2@SMYD1
|description=CAGE_peak_2_at_SMYD1_5end
|association_with_transcript=0bp_to_ENST00000295833,ENST00000438570...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150572 | |EntrezGene=150572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20986 | |HGNC=20986 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NB12,C9JUP3 | |UniProt=Q8NB12,C9JUP3 | ||
|association_with_transcript=0bp_to_ENST00000295833,ENST00000438570,uc002ssq.1,uc002ssr.2_5end | |||
|cluster_id=chr2:88367368..88367386,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_SMYD1_5end | |||
|id=chr2:88367368..88367386,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.21e-12!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.95e-12;4!UBERON:0007284;2.95e-12;4!UBERON:0004140;7.49e-07;1!UBERON:0006603;9.63e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.17e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.17e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.89e-41!115;UBERON:0001950!4.29e-18!20;UBERON:0002619!3.21e-16!22;UBERON:0000956!4.49e-16!25;UBERON:0000203!4.49e-16!25;UBERON:0001869!1.44e-15!32;UBERON:0001893!1.97e-14!34;UBERON:0002791!4.02e-13!33;UBERON:0002020!1.23e-12!34;UBERON:0003528!1.23e-12!34;UBERON:0003080!1.58e-12!42;UBERON:0002780!2.49e-11!41;UBERON:0001890!2.49e-11!41;UBERON:0006240!2.49e-11!41;UBERON:0000481!3.67e-11!347;UBERON:0001049!1.86e-10!57;UBERON:0005068!1.86e-10!57;UBERON:0006241!1.86e-10!57;UBERON:0007135!1.86e-10!57;UBERON:0003075!7.48e-10!86;UBERON:0007284!7.48e-10!86;UBERON:0002346!3.72e-09!90;UBERON:0004151!7.26e-09!3;UBERON:0003978!8.04e-09!3;UBERON:0009751!8.04e-09!3;UBERON:0000946!8.04e-09!3;UBERON:0002523!8.04e-09!3;UBERON:0005983!8.04e-09!3;UBERON:0002165!8.04e-09!3;UBERON:0002062!8.04e-09!3;UBERON:0007280!8.04e-09!3;UBERON:0002616!9.14e-09!59;UBERON:0003056!2.39e-08!61;UBERON:0000153!5.05e-08!129;UBERON:0007811!5.05e-08!129;UBERON:0000955!1.17e-07!69;UBERON:0006238!1.17e-07!69;UBERON:0002021!1.37e-07!5;UBERON:0005743!1.38e-07!86;UBERON:0001017!2.28e-07!82;UBERON:0001871!6.97e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.00e-16;3!UBERON:0003978;3.59e-16;3!UBERON:0000946;3.59e-16;3!UBERON:0007100;1.32e-15;25!UBERON:0005090;9.07e-12;2!UBERON:0001630;9.07e-12;2!UBERON:0000341;1.99e-11;2!UBERON:0002081;2.93e-11;2!UBERON:0001134;3.01e-11;16!UBERON:0002036;3.01e-11;16!UBERON:0002133;4.08e-11;2!UBERON:0003127;8.08e-11;2!UBERON:0000948;4.69e-08;22!UBERON:0001723;4.99e-08;3!UBERON:0001033;4.99e-08;3!UBERON:0002385;3.65e-07;31!UBERON:0001015;3.65e-07;31!UBERON:0000383;3.65e-07;31!UBERON:0001389;8.34e-07;1!UBERON:0000026;8.34e-07;1!UBERON:0008784;8.34e-07;1!UBERON:0006058;8.34e-07;1!UBERON:0003663;8.34e-07;1!UBERON:0004256;8.34e-07;1!UBERON:0004708;8.34e-07;1!UBERON:0002101;8.34e-07;1!UBERON:0004709;8.34e-07;1!UBERON:0002529;8.34e-07;1!UBERON:0010538;8.34e-07;1!UBERON:0003661;8.34e-07;1!UBERON:0010890;8.34e-07;1!UBERON:0002471;8.34e-07;1!UBERON:0001383;8.34e-07;1!UBERON:0010758;8.34e-07;1!UBERON:0010707;8.34e-07;1!UBERON:0000978;8.34e-07;1!UBERON:0002103;8.34e-07;1!UBERON:0001665;8.34e-07;1!UBERON:0003823;8.34e-07;1!UBERON:0000154;8.34e-07;1!UBERON:0010709;8.34e-07;1!UBERON:0002146;9.29e-07;1!UBERON:0005623;9.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.20e-22,114;UBERON:0004151,2.92e-16,3;UBERON:0003978,3.59e-16,3;UBERON:0009751,3.59e-16,3;UBERON:0000946,3.59e-16,3;UBERON:0002523,3.59e-16,3;UBERON:0005983,3.59e-16,3;UBERON:0002165,3.59e-16,3;UBERON:0002062,3.59e-16,3;UBERON:0007280,3.59e-16,3;UBERON:0007100,2.49e-14,27;UBERON:0003103,5.55e-12,68;UBERON:0005090,9.08e-12,2;UBERON:0001630,9.08e-12,2;UBERON:0000341,1.99e-11,2;UBERON:0002081,2.85e-11,2;UBERON:0010227,2.85e-11,2;UBERON:0002133,4.08e-11,2;UBERON:0003127,6.78e-11,2;UBERON:0001723,4.99e-08,3;UBERON:0001033,4.99e-08,3;UBERON:0010056,4.99e-08,3;UBERON:0000948,2.49e-07,24;UBERON:0005498,2.49e-07,24;UBERON:0004140,2.49e-07,24;UBERON:0009881,2.49e-07,24;UBERON:0004141,2.49e-07,24;UBERON:0003084,2.49e-07,24;UBERON:0007005,2.49e-07,24;UBERON:0004139,2.49e-07,24;UBERON:0004291,2.49e-07,24;UBERON:0004797,3.45e-07,7;UBERON:0005418,8.34e-07,1;UBERON:0001389,8.34e-07,1;UBERON:0000026,8.34e-07,1;UBERON:0008784,8.34e-07,1;UBERON:0006058,8.34e-07,1;UBERON:0003663,8.34e-07,1;UBERON:0004256,8.34e-07,1;UBERON:0004708,8.34e-07,1;UBERON:0002101,8.34e-07,1;UBERON:0004709,8.34e-07,1;UBERON:0002529,8.34e-07,1;UBERON:0010538,8.34e-07,1;UBERON:0003661,8.34e-07,1;UBERON:0010890,8.34e-07,1;UBERON:0002471,8.34e-07,1;UBERON:0001383,8.34e-07,1;UBERON:0004357,8.34e-07,1;UBERON:0004347,8.34e-07,1;UBERON:0005420,8.34e-07,1;UBERON:0005732,8.34e-07,1;UBERON:0010758,8.34e-07,1;UBERON:0010707,8.34e-07,1;UBERON:0000978,8.34e-07,1;UBERON:0002103,8.34e-07,1;UBERON:0001665,8.34e-07,1;UBERON:0003823,8.34e-07,1;UBERON:0000154,8.34e-07,1;UBERON:0010709,8.34e-07,1;UBERON:0005733,8.34e-07,1;UBERON:0005730,8.34e-07,1;UBERON:0002146,9.30e-07,1;UBERON:0005623,9.30e-07,1 | |||
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| ||
|short_description=p2@SMYD1 | |||
}} | }} |
Latest revision as of 20:31, 18 September 2015
Short description: | p2@SMYD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMYD1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000295833, ENST00000438570, uc002ssq.1, uc002ssr.2_5end |
EntrezGene: | SMYD1 |
HGNC: | 20986 |
UniProt: | Q8NB12C9JUP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.17e-12 | 2 |