FFCP PHASE1:Hg19::chr1:177939352..177939395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89866 | |EntrezGene=89866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30301 | |HGNC=30301 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK14 | |UniProt=E9PK14 | ||
|association_with_transcript=-4bp_to_ENST00000464631,uc001gll.3_5end | |||
|cluster_id=chr1:177939352..177939395,- | |||
|description=CAGE_peak_3_at_SEC16B_5end | |||
|id=chr1:177939352..177939395,- | |||
|ontology_enrichment_celltype=CL:0000453!2.74e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.11e-12;3!CL:0002251;1.12e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.12e-12,3;CL:0002251,1.31e-08,20;CL:0000223,6.07e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.25e-07;13 | |||
|ontology_enrichment_disease=DOID:305!1.11e-16!106;DOID:162!3.35e-16!235;DOID:14566!1.79e-15!239;DOID:0050687!2.71e-12!143;DOID:7!1.63e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.96e-09;2!DOID:299;1.39e-08;25!DOID:4929;2.68e-08;2!DOID:1749;5.28e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.02e-13,106;DOID:162,6.95e-12,235;DOID:14566,1.80e-11,239;DOID:3493,5.98e-09,2;DOID:0050687,9.02e-09,143;DOID:299,1.33e-08,25;DOID:4929,1.58e-08,2;DOID:1749,5.72e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.20e-12!35;UBERON:0009497!1.28e-10!25;UBERON:0000015!1.28e-10!25;UBERON:0002423!1.28e-10!25;UBERON:0006235!1.28e-10!25;UBERON:0004161!1.28e-10!25;UBERON:0004921!3.06e-10!129;UBERON:0004185!3.06e-10!129;UBERON:0001007!5.79e-10!155;UBERON:0001555!5.79e-10!155;UBERON:0007026!5.79e-10!155;UBERON:0000945!9.82e-10!8;UBERON:0010039!9.82e-10!8;UBERON:0002294!8.19e-09!7;UBERON:0001173!8.19e-09!7;UBERON:0004912!8.19e-09!7;UBERON:0009854!1.05e-08!23;UBERON:0004119!3.31e-08!169;UBERON:0000925!3.31e-08!169;UBERON:0006595!3.31e-08!169;UBERON:0000077!4.90e-08!130;UBERON:0005057!5.34e-08!26;UBERON:0008835!1.23e-07!22;UBERON:0003894!1.23e-07!22;UBERON:0003929!1.43e-07!54;UBERON:0009856!2.37e-07!26;UBERON:0001041!3.05e-07!98;UBERON:0002075!4.53e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.55e-10;25!UBERON:0005409;2.71e-09;22!UBERON:0002394;3.61e-09;4!UBERON:0003928;3.61e-09;4!UBERON:0002294;8.07e-09;7!UBERON:0001173;8.07e-09;7!UBERON:0000945;1.31e-07;5!UBERON:0010039;1.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.02e-11,23;UBERON:0009497,1.33e-10,25;UBERON:0000015,1.33e-10,25;UBERON:0002423,1.33e-10,25;UBERON:0006235,1.33e-10,25;UBERON:0004161,1.33e-10,25;UBERON:0009856,3.51e-10,26;UBERON:0005409,3.51e-10,25;UBERON:0008835,9.15e-10,22;UBERON:0003894,9.15e-10,22;UBERON:0007499,1.93e-08,25;UBERON:0004921,6.31e-08,118;UBERON:0000945,6.83e-08,8;UBERON:0010039,6.83e-08,8;UBERON:0001007,2.87e-07,145;UBERON:0001555,2.87e-07,145;UBERON:0007026,2.87e-07,145;UBERON:0002294,6.62e-07,9;UBERON:0001173,6.62e-07,9;UBERON:0004912,6.62e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.164201178899891,0.944529375764151,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0.724232594804119,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,2.36315962672562,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01753259188349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12600539952579,0,0,0,0,0,0,0,0,11.5126843026518,0,0,0,0,0.1605880751037,0,2.12923118845163,0,2.15068535015921,2.46043718681657,1.50164227540718,0,0,0,0.270455678475983,0,0,3.36852972734796,0,0,1.00299045849731,0,0,0.593929361665277,0,0,0.140669416410513,0,0,0,0,1.38141957765574,0,0,4.67722260752064,0,1.3480252672099,3.58042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.848118428603645,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,5.19359706296202,0.174118413160805,0,0,0.19351266257817,0.365446585430928,0.164230914106418,0,0,0.225980740780532,0.411125773940253,0.19871461170299,0,0.195551382734803,1.12222348352147,0.85381197895741,3.79638258206047,1.00863292007874,0,0.343189995723929,0,0,0,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,1.15382201733633,1.14586024552114,0.688992370603241,0.592713324460491,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.566560457600628,1.90517903781507,0,0,0,2.05304205461195,0,0,0,0,0,3.16178611036711,1.58330377895165,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,2.78774068787403,0,0,0,0,0,1.54400723580486,0,0,0,0,0.512483037175893,0,0,0,0.194860308839388,0.531459361253452,1.4720885483026,0,1.2288645437686,0,0,0,9.47182388134486,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52032215008773,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75142897782519,1.03973099535304,0,0,0,0,0,1.56302802246618,0,0.49131575253029,1.47856086217045,0,0,0,0,0,0,0,0,3.32182311862948,0,0,0,0,0,3.57225361422916,0.342976018874837,0,0,0,0,0,0,1.12108865325516,0,2.59113109462346,6.21077194253165,0,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15930513953535,2.56027642462766,0,0,0,0,0,0,0,0,0,0.301925687133347,0.694567422971502,1.09279780251979,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,1.59905849479886,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,1.52702843581198,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.164201178899891,0.944529375764151,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0.724232594804119,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,2.36315962672562,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01753259188349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12600539952579,0,0,0,0,0,0,0,0,11.5126843026518,0,0,0,0,0.1605880751037,0,2.12923118845163,0,2.15068535015921,2.46043718681657,1.50164227540718,0,0,0,0.270455678475983,0,0,3.36852972734796,0,0,1.00299045849731,0,0,0.593929361665277,0,0,0.140669416410513,0,0,0,0,1.38141957765574,0,0,4.67722260752064,0,1.3480252672099,3.58042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.848118428603645,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,5.19359706296202,0.174118413160805,0,0,0.19351266257817,0.365446585430928,0.164230914106418,0,0,0.225980740780532,0.411125773940253,0.19871461170299,0,0.195551382734803,1.12222348352147,0.85381197895741,3.79638258206047,1.00863292007874,0,0.343189995723929,0,0,0,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,1.15382201733633,1.14586024552114,0.688992370603241,0.592713324460491,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.566560457600628,1.90517903781507,0,0,0,2.05304205461195,0,0,0,0,0,3.16178611036711,1.58330377895165,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,2.78774068787403,0,0,0,0,0,1.54400723580486,0,0,0,0,0.512483037175893,0,0,0,0.194860308839388,0.531459361253452,1.4720885483026,0,1.2288645437686,0,0,0,9.47182388134486,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52032215008773,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75142897782519,1.03973099535304,0,0,0,0,0,1.56302802246618,0,0.49131575253029,1.47856086217045,0,0,0,0,0,0,0,0,3.32182311862948,0,0,0,0,0,3.57225361422916,0.342976018874837,0,0,0,0,0,0,1.12108865325516,0,2.59113109462346,6.21077194253165,0,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15930513953535,2.56027642462766,0,0,0,0,0,0,0,0,0,0.301925687133347,0.694567422971502,1.09279780251979,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,1.59905849479886,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,1.52702843581198,0,0,0,0,0,0 | ||
|short_description=p3@SEC16B | |||
}} | }} |
Latest revision as of 21:07, 18 September 2015
Short description: | p3@SEC16B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEC16B_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000464631, uc001gll.3_5end |
EntrezGene: | SEC16B |
HGNC: | 30301 |
UniProt: | E9PK14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.12e-12 | 3 |
epithelial cell of alimentary canal | 1.31e-08 | 20 |
endodermal cell | 6.07e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.02e-11 | 23 |
epithelium of foregut-midgut junction | 1.33e-10 | 25 |
anatomical boundary | 1.33e-10 | 25 |
hepatobiliary system | 1.33e-10 | 25 |
foregut-midgut junction | 1.33e-10 | 25 |
septum transversum | 1.33e-10 | 25 |
sac | 3.51e-10 | 26 |
gastrointestinal system | 3.51e-10 | 25 |
hepatic diverticulum | 9.15e-10 | 22 |
liver primordium | 9.15e-10 | 22 |
epithelial sac | 1.93e-08 | 25 |
subdivision of digestive tract | 6.31e-08 | 118 |
stomach | 6.83e-08 | 8 |
food storage organ | 6.83e-08 | 8 |
digestive system | 2.87e-07 | 145 |
digestive tract | 2.87e-07 | 145 |
primitive gut | 2.87e-07 | 145 |
biliary system | 6.62e-07 | 9 |
biliary tree | 6.62e-07 | 9 |
biliary bud | 6.62e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.02e-13 | 106 |
cancer | 6.95e-12 | 235 |
disease of cellular proliferation | 1.80e-11 | 239 |
signet ring cell adenocarcinoma | 5.98e-09 | 2 |
cell type cancer | 9.02e-09 | 143 |
adenocarcinoma | 1.33e-08 | 25 |
tubular adenocarcinoma | 1.58e-08 | 2 |
squamous cell carcinoma | 5.72e-07 | 14 |