FFCP PHASE1:Hg19::chr11:62600765..62600769,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62600765..62600769,-
|short_description=p6@WDR74
|description=CAGE_peak_6_at_WDR74_5end
|association_with_transcript=-226bp_to_ENST00000536401_5end
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54663 | |EntrezGene=54663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25529 | |HGNC=25529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-226bp_to_ENST00000536401_5end | |||
|cluster_id=chr11:62600765..62600769,- | |||
|description=CAGE_peak_6_at_WDR74_5end | |||
|id=chr11:62600765..62600769,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0002097;1.50e-10;2!CL:0000054;2.48e-10;2!CL:0000137;2.48e-10;2!CL:0000092;2.48e-10;2!CL:0000174;1.87e-07;3!CL:0000623;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.30e-19,1;CL:0002625,1.30e-19,1;CL:0000216,1.30e-19,1;CL:0002097,1.57e-10,2;CL:0000054,2.49e-10,2;CL:0000137,2.49e-10,2;CL:0000092,2.49e-10,2;CL:0000174,1.93e-07,3;CL:0000623,2.97e-07,3;CL:0000825,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.21e-21!239;DOID:162!1.24e-21!235;DOID:0050687!4.42e-16!143;DOID:0050686!2.80e-13!137;DOID:305!5.90e-13!106;DOID:2531!1.55e-07!51;DOID:0060083!1.55e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.71e-19;1!DOID:3165;2.71e-19;1!DOID:0060121;2.71e-19;1!DOID:2438;2.71e-19;1!DOID:4418;2.71e-19;1!DOID:200;2.48e-10;2!DOID:1909;2.48e-10;2!DOID:4305;2.48e-10;2!DOID:1036;4.52e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.71e-19,1;DOID:3165,2.71e-19,1;DOID:0060121,2.71e-19,1;DOID:2438,2.71e-19,1;DOID:4418,2.71e-19,1;DOID:200,2.49e-10,2;DOID:4305,2.49e-10,2;DOID:1909,2.72e-10,2;DOID:1036,4.03e-10,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0004909;2.48e-10;2!UBERON:0002369;1.87e-07;3!UBERON:0001235;1.87e-07;3!UBERON:0006858;1.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.30e-19,1;UBERON:0001343,1.30e-19,1;UBERON:0004910,1.30e-19,1;UBERON:0005154,1.30e-19,1;UBERON:0005295,1.30e-19,1;UBERON:0004813,1.30e-19,1;UBERON:0005297,1.30e-19,1;UBERON:0005294,1.30e-19,1;UBERON:0010141,1.30e-19,1;UBERON:0005891,1.30e-19,1;UBERON:0004909,1.72e-10,2;UBERON:0002369,1.93e-07,3;UBERON:0001235,1.93e-07,3;UBERON:0006858,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.309868802321207,0.142169232487422,0,0,0,0.868043482863407,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.393419540227666,0.786021525498329,0,0,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0.535081656179426,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.80642697289893,0.802320587350522,1.01377082717959,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0.675105328965065,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0.310983165046111,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.448340575974109,0,0.215627574859517,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.557409525377156,0.28853842595289,0.284567373393656,0.318852545457645,0.798317485731266,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0.66614393599564,1.4098700508785,0.18714054040822,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,1.00177834520615,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0.615424027305347,0,0.629078458031288,0,0,0.0986434056369336,0,0,0,0,0,0,0.962059999958153,0,0.341380344856499,0.762760950878299,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0.139423744278603,0,0.455768223388005,0,0.0897576444097721,0.217294743844016,0,0,0,0,0.31396051279005,0.831058409500782,0.225595660617181,0,0,0,2.54298526368606,0,0.326465616318295,0.282706142867882,0,0.995261931078505,0.176915129006678,0,0,0.247127877893006,0,0.269604531922708,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.293977192243133,0.435296032902013,0.34945333648406,0,0.19351266257817,0.0730893170861856,0.246346371159628,0.0969890164884194,0.176512253383001,0,0.137041924646751,1.39100228192093,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0.288109595976299,0.372757606696298,0,0.135904206073614,0,0.407992870545287,0.288950589901519,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.844802692155252,0,0.767660789277781,0,0,0.25426853765475,0,0,0,0,1.55975789423744,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0.414239055347196,0.496166021811951,0.395223263795889,0.365377795142688,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0.249960815924213,1.36484205787483,0,0.470531639396343,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,2.14441591374926,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0.422624246717254,0.19998739585493,0.106691729694141,0.172214979660816,0,0.552317850755522,0,0,0.255788742607303,0,0.786329709279482,0.436838552768056,0.33946505990805,0,0.619678821295011,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0.392590874004102,0,0.366857197043358,0.577628330751691,0,0,0.198916222116275,0,0.20170506870352,0,0.523813388962845,0.818859587550484,0,0,0.781078098613847,0,0,0.546974809018219,0,0,0.527613733078862,0,0,0,0,0,0.0887023701626388,0.345701962667338,0,0.135939465953663,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0.801711364730253,0,0,0,0,0.236664001461131,0.170426809518315,0,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0.121917924982269,0,0,0,0,0,1.59160620129095,0.356760272332706,0.22589216407792,0.219881033490858,0.301925687133347,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0.193373663920732,0.499705779624645,0,0.352894871715692,0.240724100067505,0,0,0.286679166302903,0.157771562193185,0.203974470572744,0,0.5290268405154,0,0,0,0.252332849670158,0,0.506794004045748,0.509944148709909,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0.560659312903067,0,0.606351566874658,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0.244209805832924,0.320182037633146,0,0.808426818959282,0,0.122241444182866,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.309868802321207,0.142169232487422,0,0,0,0.868043482863407,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.393419540227666,0.786021525498329,0,0,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0.535081656179426,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.80642697289893,0.802320587350522,1.01377082717959,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0.675105328965065,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0.310983165046111,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.448340575974109,0,0.215627574859517,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.557409525377156,0.28853842595289,0.284567373393656,0.318852545457645,0.798317485731266,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0.66614393599564,1.4098700508785,0.18714054040822,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,1.00177834520615,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0.615424027305347,0,0.629078458031288,0,0,0.0986434056369336,0,0,0,0,0,0,0.962059999958153,0,0.341380344856499,0.762760950878299,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0.139423744278603,0,0.455768223388005,0,0.0897576444097721,0.217294743844016,0,0,0,0,0.31396051279005,0.831058409500782,0.225595660617181,0,0,0,2.54298526368606,0,0.326465616318295,0.282706142867882,0,0.995261931078505,0.176915129006678,0,0,0.247127877893006,0,0.269604531922708,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.293977192243133,0.435296032902013,0.34945333648406,0,0.19351266257817,0.0730893170861856,0.246346371159628,0.0969890164884194,0.176512253383001,0,0.137041924646751,1.39100228192093,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0.288109595976299,0.372757606696298,0,0.135904206073614,0,0.407992870545287,0.288950589901519,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.844802692155252,0,0.767660789277781,0,0,0.25426853765475,0,0,0,0,1.55975789423744,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0.414239055347196,0.496166021811951,0.395223263795889,0.365377795142688,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0.249960815924213,1.36484205787483,0,0.470531639396343,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,2.14441591374926,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0.422624246717254,0.19998739585493,0.106691729694141,0.172214979660816,0,0.552317850755522,0,0,0.255788742607303,0,0.786329709279482,0.436838552768056,0.33946505990805,0,0.619678821295011,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0.392590874004102,0,0.366857197043358,0.577628330751691,0,0,0.198916222116275,0,0.20170506870352,0,0.523813388962845,0.818859587550484,0,0,0.781078098613847,0,0,0.546974809018219,0,0,0.527613733078862,0,0,0,0,0,0.0887023701626388,0.345701962667338,0,0.135939465953663,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0.801711364730253,0,0,0,0,0.236664001461131,0.170426809518315,0,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0.121917924982269,0,0,0,0,0,1.59160620129095,0.356760272332706,0.22589216407792,0.219881033490858,0.301925687133347,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0.193373663920732,0.499705779624645,0,0.352894871715692,0.240724100067505,0,0,0.286679166302903,0.157771562193185,0.203974470572744,0,0.5290268405154,0,0,0,0.252332849670158,0,0.506794004045748,0.509944148709909,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0.560659312903067,0,0.606351566874658,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0.244209805832924,0.320182037633146,0,0.808426818959282,0,0.122241444182866,0,0,0,0.320568492303233 | ||
|short_description=p6@WDR74 | |||
}} | }} |
Latest revision as of 21:43, 18 September 2015
Short description: | p6@WDR74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WDR74_5end |
Coexpression cluster: | NA |
Association with transcript: | -226bp_to_ENST00000536401_5end |
EntrezGene: | WDR74 |
HGNC: | 25529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.30e-19 | 1 |
seminiferous tubule epithelial cell | 1.30e-19 | 1 |
Sertoli cell | 1.30e-19 | 1 |
cortical cell of adrenal gland | 1.57e-10 | 2 |
bone matrix secreting cell | 2.49e-10 | 2 |
osteocyte | 2.49e-10 | 2 |
osteoclast | 2.49e-10 | 2 |
steroid hormone secreting cell | 1.93e-07 | 3 |
natural killer cell | 2.97e-07 | 3 |
pro-NK cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.30e-19 | 1 |
seminiferous tubule of testis | 1.30e-19 | 1 |
epithelium of male gonad | 1.30e-19 | 1 |
epithelial cord | 1.30e-19 | 1 |
sex cord | 1.30e-19 | 1 |
seminiferous tubule epithelium | 1.30e-19 | 1 |
testis sex cord | 1.30e-19 | 1 |
genital ridge | 1.30e-19 | 1 |
primitive sex cord of indifferent gonad | 1.30e-19 | 1 |
coelomic epithelium | 1.30e-19 | 1 |
epithelium of gonad | 1.72e-10 | 2 |
adrenal gland | 1.93e-07 | 3 |
adrenal cortex | 1.93e-07 | 3 |
adrenal/interrenal gland | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.71e-19 | 1 |
skin benign neoplasm | 2.71e-19 | 1 |
integumentary system benign neoplasm | 2.71e-19 | 1 |
dermis tumor | 2.71e-19 | 1 |
cutaneous fibrous histiocytoma | 2.71e-19 | 1 |
giant cell tumor | 2.49e-10 | 2 |
bone giant cell tumor | 2.49e-10 | 2 |
melanoma | 2.72e-10 | 2 |
chronic leukemia | 4.03e-10 | 8 |