FFCP PHASE1:Hg19::chr12:52579466..52579477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144501 | |EntrezGene=144501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27056 | |HGNC=27056 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000466011_5end | |association_with_transcript=55bp_to_ENST00000466011_5end | ||
|cluster_id=chr12:52579466..52579477,- | |||
|coexpression_cluster_id=C2214 | |coexpression_cluster_id=C2214 | ||
|description=CAGE_peak_12_at_KRT80_5end | |description=CAGE_peak_12_at_KRT80_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002586!2.73e-12!3;CL:0000066!3.06e-12!254;CL:0002150!6.87e-12!3;CL:0000861!6.87e-12!3;CL:0000076!1.90e-09!62;CL:0000149!2.58e-09!4;CL:0000317!1.67e-08!2;CL:1000448!1.67e-08!2;CL:0002308!1.67e-08!2;CL:0002140!1.67e-08!2;CL:0000077!2.28e-08!19;CL:0000362!3.25e-07!8 | |ontology_enrichment_celltype=CL:0002586!2.73e-12!3;CL:0000066!3.06e-12!254;CL:0002150!6.87e-12!3;CL:0000861!6.87e-12!3;CL:0000076!1.90e-09!62;CL:0000149!2.58e-09!4;CL:0000317!1.67e-08!2;CL:1000448!1.67e-08!2;CL:0002308!1.67e-08!2;CL:0002140!1.67e-08!2;CL:0000077!2.28e-08!19;CL:0000362!3.25e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002586;3.89e-23;3!CL:0000149;1.27e-17;4!CL:0001014;1.44e-09;2!CL:0001016;1.44e-09;2 | |ontology_enrichment_celltype_v019=CL:0002586;3.89e-23;3!CL:0000149;1.27e-17;4!CL:0001014;1.44e-09;2!CL:0001016;1.44e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.15e-23,3;CL:0000149,1.57e-17,4;CL:0001014,1.03e-09,2;CL:0001016,1.03e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.39e-07;10 | |ontology_enrichment_development_v019=UBERON:0006238;5.39e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4074;1.44e-09;2!DOID:4905;1.44e-09;2!DOID:3498;1.44e-09;2 | |ontology_enrichment_disease_v019=DOID:4074;1.44e-09;2!DOID:4905;1.44e-09;2!DOID:3498;1.44e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4074,1.44e-09,2;DOID:4905,1.44e-09,2;DOID:3498,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.21e-18!9;UBERON:0001557!3.83e-13!19;UBERON:0001781!2.73e-12!3;UBERON:0001782!2.73e-12!3;UBERON:0005424!2.73e-12!3;UBERON:0002419!1.67e-08!2;UBERON:0007771!1.67e-08!2;UBERON:0003297!1.67e-08!2;UBERON:0001821!1.67e-08!2;UBERON:0003487!1.67e-08!2;UBERON:0001820!1.67e-08!2;UBERON:0005089!1.67e-08!2;UBERON:0005088!1.67e-08!2;UBERON:0000966!1.60e-07!5;UBERON:0005388!1.60e-07!5;UBERON:0001802!1.60e-07!5 | |ontology_enrichment_uberon=UBERON:0001737!2.21e-18!9;UBERON:0001557!3.83e-13!19;UBERON:0001781!2.73e-12!3;UBERON:0001782!2.73e-12!3;UBERON:0005424!2.73e-12!3;UBERON:0002419!1.67e-08!2;UBERON:0007771!1.67e-08!2;UBERON:0003297!1.67e-08!2;UBERON:0001821!1.67e-08!2;UBERON:0003487!1.67e-08!2;UBERON:0001820!1.67e-08!2;UBERON:0005089!1.67e-08!2;UBERON:0005088!1.67e-08!2;UBERON:0000966!1.60e-07!5;UBERON:0005388!1.60e-07!5;UBERON:0001802!1.60e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;3.89e-23;3!UBERON:0001782;3.89e-23;3!UBERON:0007029;8.72e-18;1!UBERON:0000966;2.66e-14;5!UBERON:0005388;2.66e-14;5!UBERON:0001802;2.66e-14;5!UBERON:0007625;5.39e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001781;3.89e-23;3!UBERON:0001782;3.89e-23;3!UBERON:0007029;8.72e-18;1!UBERON:0000966;2.66e-14;5!UBERON:0005388;2.66e-14;5!UBERON:0001802;2.66e-14;5!UBERON:0007625;5.39e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.15e-23,3;UBERON:0005424,5.15e-23,3;UBERON:0007029,7.37e-18,1;UBERON:0001781,1.57e-17,4;UBERON:0000966,5.08e-12,6;UBERON:0005388,5.08e-12,6;UBERON:0001802,5.08e-12,6;UBERON:0007625,5.81e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0.512900250232778,2.29610251989794,1.30151357865721,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0.23874448473769,0,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,1.30726156222788,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45668227720456,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.870806981601766,0.292357268344742,1.23173185579814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49494626680975,2.30126261887133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13352962756136,0.231522474323834,0,0,4.32322026025361,0.219284049578707,0,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0.512900250232778,2.29610251989794,1.30151357865721,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0.23874448473769,0,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,1.30726156222788,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45668227720456,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.870806981601766,0.292357268344742,1.23173185579814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49494626680975,2.30126261887133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13352962756136,0.231522474323834,0,0,4.32322026025361,0.219284049578707,0,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@KRT80 | |short_description=p12@KRT80 | ||
}} | }} |
Latest revision as of 21:44, 18 September 2015
Short description: | p12@KRT80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KRT80_5end |
Coexpression cluster: | C2214_Retinal_mesothelioma_anaplastic_glioblastoma_immature_ductal_cervical |
Association with transcript: | 55bp_to_ENST00000466011_5end |
EntrezGene: | KRT80 |
HGNC: | 27056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.15e-23 | 3 |
visual pigment cell | 1.57e-17 | 4 |
CD1a-positive Langerhans cell | 1.03e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.15e-23 | 3 |
presumptive retinal pigmented epithelium | 5.15e-23 | 3 |
surface | 7.37e-18 | 1 |
layer of retina | 1.57e-17 | 4 |
retina | 5.08e-12 | 6 |
photoreceptor array | 5.08e-12 | 6 |
posterior segment of eyeball | 5.08e-12 | 6 |
pigment epithelium of eye | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.44e-09 | 2 |
pancreatic carcinoma | 1.44e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.44e-09 | 2 |