FFCP PHASE1:Hg19::chr11:6260298..6260333,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1262 | |EntrezGene=1262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2152 | |HGNC=2152 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV77 | |UniProt=Q8IV77 | ||
|association_with_transcript=0bp_to_ENST00000379936,NM_001037329,uc001mco.2_5end | |association_with_transcript=0bp_to_ENST00000379936,NM_001037329,uc001mco.2_5end | ||
|cluster_id=chr11:6260298..6260333,+ | |||
|coexpression_cluster_id=C2147 | |||
|description=CAGE_peak_1_at_CNGA4_5end | |description=CAGE_peak_1_at_CNGA4_5end | ||
|id=chr11:6260298..6260333,+ | |id=chr11:6260298..6260333,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.15e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.89e-10;29!UBERON:0010122;2.58e-07;2!UBERON:0006965;3.38e-07;2!UBERON:0007297;3.38e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.12e-24!115;UBERON:0001049!5.23e-24!57;UBERON:0005068!5.23e-24!57;UBERON:0006241!5.23e-24!57;UBERON:0007135!5.23e-24!57;UBERON:0002616!2.36e-18!59;UBERON:0001017!6.63e-17!82;UBERON:0003076!8.02e-17!15;UBERON:0003057!8.02e-17!15;UBERON:0002308!2.08e-16!9;UBERON:0000125!2.08e-16!9;UBERON:0005743!6.54e-16!86;UBERON:0000955!7.38e-15!69;UBERON:0006238!7.38e-15!69;UBERON:0003075!2.00e-14!86;UBERON:0007284!2.00e-14!86;UBERON:0000073!5.59e-14!94;UBERON:0001016!5.59e-14!94;UBERON:0001896!9.34e-14!3;UBERON:0005290!9.34e-14!3;UBERON:0010096!9.34e-14!3;UBERON:0002346!1.38e-13!90;UBERON:0002298!2.22e-13!8;UBERON:0004733!2.60e-12!12;UBERON:0002028!2.60e-12!12;UBERON:0007277!2.60e-12!12;UBERON:0002780!9.54e-12!41;UBERON:0001890!9.54e-12!41;UBERON:0006240!9.54e-12!41;UBERON:0003080!2.04e-11!42;UBERON:0004732!2.58e-11!13;UBERON:0000369!2.80e-10!4;UBERON:0002435!2.80e-10!4;UBERON:0000204!2.80e-10!4;UBERON:0010082!2.80e-10!4;UBERON:0003127!4.08e-10!2;UBERON:0002020!5.82e-10!34;UBERON:0003528!5.82e-10!34;UBERON:0000341!6.35e-10!2;UBERON:0001873!7.90e-10!2;UBERON:0010122!7.90e-10!2;UBERON:0009663!8.12e-10!7;UBERON:0002148!1.51e-09!2;UBERON:0009662!1.51e-09!2;UBERON:0001897!1.58e-09!2;UBERON:0000025!1.35e-08!194;UBERON:0002791!2.74e-08!33;UBERON:0000153!3.66e-08!129;UBERON:0007811!3.66e-08!129;UBERON:0001893!5.23e-08!34;UBERON:0002420!1.20e-07!9;UBERON:0007245!1.20e-07!9;UBERON:0010009!1.20e-07!9;UBERON:0010011!1.20e-07!9;UBERON:0000454!1.20e-07!9;UBERON:0003056!3.47e-07!61;UBERON:0005383!8.21e-07!3;UBERON:0005382!8.21e-07!3;UBERON:0001869!9.10e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.96e-24;2!UBERON:0000341;7.61e-24;2!UBERON:0001301;3.99e-13;1!UBERON:0002171;3.99e-13;1!UBERON:0006518;3.99e-13;1!UBERON:0008949;3.99e-13;1!UBERON:0000101;3.99e-13;1!UBERON:0002167;3.99e-13;1!UBERON:0000974;1.36e-08;6!UBERON:0002298;1.36e-08;6!UBERON:0003126;1.19e-07;7!UBERON:0001005;1.19e-07;7!UBERON:0006955;2.15e-07;2!UBERON:0004801;2.15e-07;2!UBERON:0001873;2.58e-07;2!UBERON:0001897;4.83e-07;2!UBERON:0002148;4.83e-07;2!UBERON:0006331;4.83e-07;2!UBERON:0009662;4.83e-07;2!UBERON:0010225;4.83e-07;2!UBERON:0005178;5.22e-07;34!UBERON:0002224;5.22e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.85e-24,2;UBERON:0000341,6.02e-24,2;UBERON:0002171,3.33e-13,1;UBERON:0006518,3.33e-13,1;UBERON:0008949,3.33e-13,1;UBERON:0000101,3.33e-13,1;UBERON:0002167,3.33e-13,1;UBERON:0001301,4.77e-13,1;UBERON:0007023,6.16e-11,114;UBERON:0005178,1.26e-08,34;UBERON:0002224,1.26e-08,34;UBERON:0002298,1.59e-08,6;UBERON:0005181,2.23e-08,35;UBERON:0008947,1.05e-07,38;UBERON:0003258,1.05e-07,38;UBERON:0003126,1.17e-07,7;UBERON:0001005,1.17e-07,7;UBERON:0006955,2.15e-07,2;UBERON:0004801,2.15e-07,2;UBERON:0001873,2.58e-07,2;UBERON:0010122,2.58e-07,2;UBERON:0001897,4.42e-07,2;UBERON:0010225,4.42e-07,2;UBERON:0002148,5.28e-07,2;UBERON:0006331,5.28e-07,2;UBERON:0009662,5.28e-07,2 | |||
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| ||
|short_description=p1@CNGA4 | |short_description=p1@CNGA4 | ||
}} | }} |
Latest revision as of 21:44, 18 September 2015
Short description: | p1@CNGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNGA4_5end |
Coexpression cluster: | C2147_argyrophil_lung_trachea_gastrointestinal_throat_caudate_aorta |
Association with transcript: | 0bp_to_ENST00000379936, NM_001037329, uc001mco.2_5end |
EntrezGene: | CNGA4 |
HGNC: | 2152 |
UniProt: | Q8IV77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.85e-24 | 2 |
throat | 6.02e-24 | 2 |
lower lobe of right lung | 3.33e-13 | 1 |
right lung lobe | 3.33e-13 | 1 |
lower lobe of lung | 3.33e-13 | 1 |
lobe of lung | 3.33e-13 | 1 |
right lung | 3.33e-13 | 1 |
epididymis | 4.77e-13 | 1 |
adult organism | 6.16e-11 | 114 |
thoracic cavity element | 1.26e-08 | 34 |
thoracic cavity | 1.26e-08 | 34 |
brainstem | 1.59e-08 | 6 |
thoracic segment organ | 2.23e-08 | 35 |
respiratory primordium | 1.05e-07 | 38 |
endoderm of foregut | 1.05e-07 | 38 |
trachea | 1.17e-07 | 7 |
respiratory airway | 1.17e-07 | 7 |
uterine epithelium | 2.15e-07 | 2 |
cervix epithelium | 2.15e-07 | 2 |
caudate nucleus | 2.58e-07 | 2 |
future caudate nucleus | 2.58e-07 | 2 |
dorsal plus ventral thalamus | 4.42e-07 | 2 |
thalamic complex | 4.42e-07 | 2 |
locus ceruleus | 5.28e-07 | 2 |
brainstem nucleus | 5.28e-07 | 2 |
hindbrain nucleus | 5.28e-07 | 2 |