FFCP PHASE1:Hg19::chr1:6510384..6510394,+: Difference between revisions
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|id=chr1:6510384..6510394,+
|short_description=p23@ESPN
|description=CAGE_peak_23_at_ESPN_5end
|association_with_transcript=-39bp_to_ENST00000475479_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83715 | |EntrezGene=83715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |HGNC=13281 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000475479_5end | |||
|cluster_id=chr1:6510384..6510394,+ | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_23_at_ESPN_5end | |||
|id=chr1:6510384..6510394,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.58e-15!12;CL:0000417!4.58e-15!12;CL:0000668!4.58e-15!12;CL:0000414!4.58e-15!12;CL:0000412!4.58e-15!12;CL:0000182!4.58e-15!12;CL:0002535!5.41e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;9.07e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.07e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.40e-27;11!UBERON:0009497;1.75e-23;13!UBERON:0001041;1.21e-10;30!UBERON:0003104;4.08e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.55e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002107!8.28e-21!19;UBERON:0006925!8.28e-21!19;UBERON:0008836!8.28e-21!19;UBERON:0008835!6.25e-18!22;UBERON:0003894!6.25e-18!22;UBERON:0009854!3.88e-17!23;UBERON:0007499!9.67e-16!25;UBERON:0009497!9.67e-16!25;UBERON:0000015!9.67e-16!25;UBERON:0002423!9.67e-16!25;UBERON:0006235!9.67e-16!25;UBERON:0004161!9.67e-16!25;UBERON:0005057!4.02e-15!26;UBERON:0009856!4.02e-15!26;UBERON:0002368!5.31e-15!35;UBERON:0002365!1.26e-12!31;UBERON:0002330!1.26e-12!31;UBERON:0000949!1.58e-11!45;UBERON:0002530!3.46e-11!59;UBERON:0003929!1.81e-09!54;UBERON:0004921!8.12e-09!129;UBERON:0004185!8.12e-09!129;UBERON:0001007!4.39e-07!155;UBERON:0001555!4.39e-07!155;UBERON:0007026!4.39e-07!155;UBERON:0006955!5.41e-07!2;UBERON:0004801!5.41e-07!2;UBERON:0005172!6.10e-07!55;UBERON:0005173!6.10e-07!55;UBERON:0000007!7.20e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;9.07e-18;2!UBERON:0004801;9.07e-18;2!UBERON:0002107;2.39e-16;19!UBERON:0006925;2.39e-16;19!UBERON:0002423;1.28e-12;25!UBERON:0002365;4.08e-10;31!UBERON:0002330;4.08e-10;31!UBERON:0000160;2.25e-08;17!UBERON:0002368;5.35e-08;33!UBERON:0002108;5.35e-08;4!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6!UBERON:0005409;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.07e-18,2;UBERON:0004801,9.07e-18,2;UBERON:0002107,2.66e-16,19;UBERON:0006925,2.66e-16,19;UBERON:0008836,2.66e-16,19;UBERON:0008835,3.42e-14,22;UBERON:0003894,3.42e-14,22;UBERON:0009854,1.31e-13,23;UBERON:0007499,1.38e-12,25;UBERON:0009497,1.38e-12,25;UBERON:0000015,1.38e-12,25;UBERON:0002423,1.38e-12,25;UBERON:0006235,1.38e-12,25;UBERON:0004161,1.38e-12,25;UBERON:0009856,3.93e-12,26;UBERON:0002365,2.68e-10,31;UBERON:0002330,2.68e-10,31;UBERON:0002368,3.33e-09,35;UBERON:0000160,2.09e-08,17;UBERON:0002108,5.35e-08,4;UBERON:0004921,2.25e-07,118;UBERON:0000949,2.60e-07,45;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6 | |||
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|short_description=p23@ESPN | |||
}} | }} |
Latest revision as of 21:49, 18 September 2015
Short description: | p23@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ESPN_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | -39bp_to_ENST00000475479_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.07e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.07e-18 | 2 |
cervix epithelium | 9.07e-18 | 2 |
liver | 2.66e-16 | 19 |
digestive gland | 2.66e-16 | 19 |
liver bud | 2.66e-16 | 19 |
hepatic diverticulum | 3.42e-14 | 22 |
liver primordium | 3.42e-14 | 22 |
digestive tract diverticulum | 1.31e-13 | 23 |
epithelial sac | 1.38e-12 | 25 |
epithelium of foregut-midgut junction | 1.38e-12 | 25 |
anatomical boundary | 1.38e-12 | 25 |
hepatobiliary system | 1.38e-12 | 25 |
foregut-midgut junction | 1.38e-12 | 25 |
septum transversum | 1.38e-12 | 25 |
sac | 3.93e-12 | 26 |
exocrine gland | 2.68e-10 | 31 |
exocrine system | 2.68e-10 | 31 |
endocrine gland | 3.33e-09 | 35 |
intestine | 2.09e-08 | 17 |
small intestine | 5.35e-08 | 4 |
subdivision of digestive tract | 2.25e-07 | 118 |
endocrine system | 2.60e-07 | 45 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.55e-08 | 5 |