FFCP PHASE1:Hg19::chr12:52643022..52643063,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52643022..52643063,+
|short_description=p1@KRT86
|description=CAGE_peak_1_at_KRT86_5end
|association_with_transcript=-20bp_to_ENST00000544024,uc010snq.1_5...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3892 | |EntrezGene=3892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6463 | |HGNC=6463 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000544024,uc010snq.1_5end | |||
|cluster_id=chr12:52643022..52643063,+ | |||
|description=CAGE_peak_1_at_KRT86_5end | |||
|id=chr12:52643022..52643063,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.67e-12;6!CL:0000098;1.67e-12;6!CL:0002167;1.67e-12;6!CL:0000138;1.87e-12;6!CL:0000222;1.74e-09;1!CL:0002174;3.72e-09;1!CL:0000501;3.72e-09;1!CL:0000153;1.82e-08;9!CL:0000447;1.82e-08;9!CL:0002552;6.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.63e-12,6;CL:0000098,1.63e-12,6;CL:0002167,1.63e-12,6;CL:0000058,1.84e-12,6;CL:0000138,1.84e-12,6;CL:0002174,3.31e-09,1;CL:0000501,3.31e-09,1;CL:0000153,1.80e-08,9;CL:0000447,1.80e-08,9;CL:0002552,6.97e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;8.49e-09;1!UBERON:0003852;8.49e-09;1 | |||
|ontology_enrichment_disease=DOID:5093!1.53e-09!4;DOID:1612!1.53e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.92e-18;4!DOID:1612;3.92e-18;4!DOID:5662;8.49e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.16e-18,4;DOID:1612,4.16e-18,4;DOID:5662,6.72e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.34e-10;7!UBERON:0009142;1.34e-10;7!UBERON:0007195;5.11e-09;1!UBERON:0005705;8.49e-09;1!UBERON:0008193;8.49e-09;1!UBERON:0010912;8.49e-09;1!UBERON:0002514;8.49e-09;1!UBERON:0003457;8.49e-09;1!UBERON:0008907;8.49e-09;1!UBERON:0008001;8.49e-09;1!UBERON:0007213;8.49e-09;1!UBERON:0009891;8.49e-09;1!UBERON:0007914;8.49e-09;1!UBERON:0007375;8.49e-09;1!UBERON:0003323;8.49e-09;1!UBERON:0010258;8.49e-09;1!UBERON:0005253;8.49e-09;1!UBERON:0007842;8.49e-09;1!UBERON:0002397;8.49e-09;1!UBERON:0003113;8.49e-09;1!UBERON:0003277;8.49e-09;1!UBERON:0001709;8.49e-09;1!UBERON:0002244;8.49e-09;1!UBERON:0005620;8.49e-09;1!UBERON:0010364;8.49e-09;1!UBERON:0004288;8.49e-09;1!UBERON:0000310;1.47e-07;10!UBERON:0001443;6.51e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.31e-09,1;UBERON:0005705,1.07e-08,1;UBERON:0008193,1.07e-08,1;UBERON:0010912,1.07e-08,1;UBERON:0002514,1.07e-08,1;UBERON:0003457,1.07e-08,1;UBERON:0008907,1.07e-08,1;UBERON:0008001,1.07e-08,1;UBERON:0007213,1.07e-08,1;UBERON:0009891,1.07e-08,1;UBERON:0007914,1.07e-08,1;UBERON:0009292,1.07e-08,1;UBERON:0003099,1.07e-08,1;UBERON:0007375,1.07e-08,1;UBERON:0003323,1.07e-08,1;UBERON:0010258,1.07e-08,1;UBERON:0007842,1.07e-08,1;UBERON:0009494,1.07e-08,1;UBERON:0010042,1.07e-08,1;UBERON:0010045,1.07e-08,1;UBERON:0010259,1.07e-08,1;UBERON:0010359,1.07e-08,1;UBERON:0009526,1.07e-08,1;UBERON:0002397,1.07e-08,1;UBERON:0003113,1.07e-08,1;UBERON:0003277,1.07e-08,1;UBERON:0001709,1.07e-08,1;UBERON:0004066,1.07e-08,1;UBERON:0002244,1.07e-08,1;UBERON:0005620,1.07e-08,1;UBERON:0004362,1.07e-08,1;UBERON:0010364,1.07e-08,1;UBERON:0010046,1.07e-08,1;UBERON:0005868,1.07e-08,1;UBERON:0007238,1.07e-08,1;UBERON:0004288,1.07e-08,1;UBERON:0004068,1.07e-08,1;UBERON:0010334,1.07e-08,1;UBERON:0003852,1.07e-08,1;UBERON:0010253,1.07e-08,1;UBERON:0000310,1.50e-07,10;UBERON:0001443,6.65e-07,11 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,4.51204119572301,5.79386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.48360157567134,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0,0,0.558350568994769,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1608175918371,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5113716763064,4.59447743336456,0,0.868687840005475,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,2.67643483195743,5.51958452618771,16.2826566839871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,2.86470537193757,0.61221999997337,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.783939179315021,0.0870592065804026,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,3.86788897277961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,10.0947918582921,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.675769762612291,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,6.48349562294184,0,0.795664888465099,0.150420656698515,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,3.57734797390867,0,0,0,0,0,0,1.54339208493677,0,0,0.118193840883968,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,4.51204119572301,5.79386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.48360157567134,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0,0,0.558350568994769,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1608175918371,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5113716763064,4.59447743336456,0,0.868687840005475,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,2.67643483195743,5.51958452618771,16.2826566839871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,2.86470537193757,0.61221999997337,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.783939179315021,0.0870592065804026,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,3.86788897277961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,10.0947918582921,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.675769762612291,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,6.48349562294184,0,0.795664888465099,0.150420656698515,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,3.57734797390867,0,0,0,0,0,0,1.54339208493677,0,0,0.118193840883968,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p1@KRT86 | |||
}} | }} |
Latest revision as of 22:16, 18 September 2015
Short description: | p1@KRT86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT86_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000544024, uc010snq.1_5end |
EntrezGene: | KRT86 |
HGNC: | 6463 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.63e-12 | 6 |
sensory epithelial cell | 1.63e-12 | 6 |
olfactory epithelial cell | 1.63e-12 | 6 |
chondroblast | 1.84e-12 | 6 |
chondrocyte | 1.84e-12 | 6 |
follicular cell of ovary | 3.31e-09 | 1 |
granulosa cell | 3.31e-09 | 1 |
GAG secreting cell | 1.80e-08 | 9 |
carbohydrate secreting cell | 1.80e-08 | 9 |
fibroblast of gingiva | 6.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.16e-18 | 4 |
breast cancer | 4.16e-18 | 4 |
pleomorphic carcinoma | 6.72e-09 | 1 |