FFCP PHASE1:Hg19::chr8:68255433..68255443,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10565 | |EntrezGene=10565 | ||
| Line 8: | Line 8: | ||
|UniProt=Q9Y6D6 | |UniProt=Q9Y6D6 | ||
|association_with_transcript=78bp_to_AF084520_5end | |association_with_transcript=78bp_to_AF084520_5end | ||
|cluster_id=chr8:68255433..68255443,- | |||
|description=CAGE_peak_9_at_ARFGEF1_5end | |description=CAGE_peak_9_at_ARFGEF1_5end | ||
|id=chr8:68255433..68255443,- | |id=chr8:68255433..68255443,- | ||
Latest revision as of 22:16, 18 September 2015
| Short description: | p9@ARFGEF1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_ARFGEF1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 78bp_to_AF084520_5end |
| EntrezGene: | ARFGEF1 |
| HGNC: | 15772 |
| UniProt: | Q9Y6D6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@ARFGEF1 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 1.42e-12 | 7 |
| germ cell | 1.42e-12 | 7 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 5.22e-19 | 8 |
| male reproductive organ | 6.72e-14 | 11 |
| stroma of bone marrow | 9.97e-11 | 1 |
| gonad | 2.27e-07 | 21 |
| indifferent external genitalia | 2.27e-07 | 21 |
| indifferent gonad | 2.27e-07 | 21 |
| gonad primordium | 2.27e-07 | 21 |
| external genitalia | 4.84e-07 | 22 |
| male organism | 4.84e-07 | 22 |
| male reproductive system | 4.84e-07 | 22 |
Showing 1 to 10 of 10 entries
