FFCP PHASE1:Hg19::chr6:43480860..43480887,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:43480860..43480887,- to FFCP PHASE1:Hg19::chr6:43480860..43480887,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25844 | |EntrezGene=25844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21023 | |HGNC=21023 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000503147_5end | |||
|cluster_id=chr6:43480860..43480887,- | |||
|description=CAGE_peak_8_at_YIPF3_5end | |||
|id=chr6:43480860..43480887,- | |||
|ontology_enrichment_celltype=CL:0000055!9.18e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.03e-07;3!CL:0000622;1.88e-07;5!CL:0002144;9.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,6.04e-08,3;CL:0000622,2.30e-07,5;CL:0002144,6.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.57e-08;3!DOID:127;4.57e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.04e-08,3;DOID:127,5.04e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.36e-07!42;UBERON:0003509!1.36e-07!42;UBERON:0004572!1.36e-07!42;UBERON:0000161!2.59e-07!35;UBERON:0001981!4.26e-07!60;UBERON:0007500!4.26e-07!60;UBERON:0004537!4.26e-07!60;UBERON:0006965!4.26e-07!60;UBERON:0003102!5.33e-07!95;UBERON:0002049!5.39e-07!79;UBERON:0007798!5.39e-07!79;UBERON:0000055!9.02e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003937;1.82e-08;12!UBERON:0005399;1.82e-08;12!UBERON:0002367;7.12e-07;11!UBERON:0010147;7.12e-07;11!UBERON:0010523;9.27e-07;3!UBERON:0001915;9.27e-07;3!UBERON:0001982;9.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003937,9.54e-09,12;UBERON:0005399,9.54e-09,12;UBERON:0000161,2.17e-08,36;UBERON:0002367,3.76e-07,11;UBERON:0010147,3.76e-07,11;UBERON:0009846,3.76e-07,11;UBERON:0003353,3.76e-07,11;UBERON:0004902,3.76e-07,11;UBERON:0003820,3.76e-07,11;UBERON:0009847,3.76e-07,11;UBERON:0010523,6.34e-07,3;UBERON:0001915,6.34e-07,3;UBERON:0001982,6.34e-07,3 | |||
|phase1_expression=1.2717486548939,0.642301571672949,1.69145284915165,1.0007329835313,0,0,2.53299878168311,1.89515962028049,0.783556884599516,0.245733936501509,0.697801167972428,0.436882744260345,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0.671746422719773,0,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,1.03423704220986,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0.329851300186716,0,0.852449501065388,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0.632924774881769,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0.766440987203842,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,1.0843174571537,2.00535164254356,0.289693037921647,4.7717156823066,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.130979075497713,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,1.46296476575767,0,0,0,1.61131726843659,1.52054421143703,1.22031028774085,0.735326160691737,3.24056779152704,0.535798369704479,0.22452937262617,0.225222960966644,0,2.84779697870439,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.759783069987479,0.264818361626438,1.14734648299525,1.41867352879343,0,1.06748995729705,1.2333377420858,0,0.538842688278752,0.490385709340376,1.21085942115945,1.15235184896,0,0.624320153660641,0,0.747243402759005,0.117434498643765,0,0.421352420106746,0.61246251376468,0.245668634623536,1.75653827998801,1.18800285728205,0.741800787835671,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0,1.35214253015937,0.453728732640084,0.179389635688862,0.640672166455702,0,0,0.309157587715317,0,0.558350568994769,0.168776332241266,0,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.169560592310488,0.386521706326594,1.09098448236334,1.43402297694502,0.243947412259191,0,0.348581828608555,0,0,0.36497735907583,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0.738155454624648,2.80483547606892,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0.768251997860379,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0.264145302039678,0.829312462163088,0.288239906833923,0.25248486685276,0,0.763976851116555,3.51652341630141,0,0.205654985406647,0.300343057843917,1.14330573052231,0.112131084345361,0.87192013766656,0.22001485746285,0.517086863031111,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.142977993658148,1.62786481617433,0,0,0.355391948742546,0,0.602878754119172,1.74306691720059,1.99945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.224170287987055,0.197030760201927,0,0,3.81141936333695,1.30139853857622,0,0,0,0.749007023947182,2.99161459204025,0,0.36807447515742,1.50051156317903,0,0.415941723061614,0.535286966391485,0,0.819989904948992,1.80567659836631,20.4666753650386,3.10419213877515,0,0.184369168541703,1.21637060255316,1.95801157462741,1.37257369524342,0.206768026122887,0.215714200818617,0,0.606255142892519,0,0.907170879989041,1.24053903909388,0.153461973288062,1.12264037773229,1.40953064181271,2.04682899626681,0.965123526861645,1.48418066444991,0,0.887808626565635,0.739144404124282,1.55776328755086,0.232420756919918,1.69203229428271,8.02025881213139,2.3941057123333,0.68888668898764,0.728364672026868,5.37610101333639,0,0.0770153371044148,0,0,0.422206515571503,0,1.53084334748864,0.431831832204279,4.62681758070868,0.541892875087706,0,0,0,0.671624264166535,0,0,0,0,0.325378394664303,0.618246069886334,0.27470839445503,0,2.29706215198469,3.25030123018261,0,0.580024309752732,0.462145851343933,0.15350367472613,0,0.107420244868274,0.435050081742686,0.255679882248303,0.712256285173899,1.98341898433174,0.768760269460425,0,1.8208400553999,0,0.31481234683064,0,0.924100740528266,1.06461206063404,0,1.66791797193528,0.143124886741991,0,0.316379424718726,0,0,0,0.95460974377781,0,0,0,0.235624804691373,0.606547444719948,0,0.421258456238981,0,0.243713489631284,1.05650146756755,1.9109987597118,1.41405431953713,1.13008116620243,0.551365343546124,1.99031692572366,0.876901770507525,0,0,1.01455188481352,0.6196469961995,0.281695602532241,0.143411352204052,0,1.07001315444375,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0.192444225451024,0,0,0.282431402330337,0.86101074534246,1.684714756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| ||
|short_description=p8@YIPF3 | |||
}} | }} |
Latest revision as of 22:28, 18 September 2015
Short description: | p8@YIPF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_YIPF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000503147_5end |
EntrezGene: | YIPF3 |
HGNC: | 21023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 6.04e-08 | 3 |
acinar cell | 2.30e-07 | 5 |
capillary endothelial cell | 6.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
sex gland | 9.54e-09 | 12 |
male reproductive gland | 9.54e-09 | 12 |
orifice | 2.17e-08 | 36 |
prostate gland | 3.76e-07 | 11 |
male accessory sex gland | 3.76e-07 | 11 |
embryonic cloacal epithelium | 3.76e-07 | 11 |
epithelium of hindgut | 3.76e-07 | 11 |
urogenital sinus epithelium | 3.76e-07 | 11 |
prostate bud | 3.76e-07 | 11 |
prostate field | 3.76e-07 | 11 |
microcirculatory vessel | 6.34e-07 | 3 |
endothelium of capillary | 6.34e-07 | 3 |
capillary | 6.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.04e-08 | 3 |
leiomyoma | 5.04e-08 | 3 |