FFCP PHASE1:Hg19::chr1:6550559..6550570,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:6550559..6550570,- to FFCP PHASE1:Hg19::chr1:6550559..6550570,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57449 | |EntrezGene=57449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29105 | |HGNC=29105 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000377725_5end | |||
|cluster_id=chr1:6550559..6550570,- | |||
|description=CAGE_peak_10_at_PLEKHG5_5end | |||
|id=chr1:6550559..6550570,- | |||
|ontology_enrichment_celltype=CL:0000066!3.30e-24!254;CL:0002321!1.78e-17!248;CL:0002076!3.66e-17!43;CL:0000220!7.93e-17!246;CL:0000223!4.63e-13!59;CL:0002251!5.58e-11!21;CL:0000076!4.80e-08!62;CL:0002159!9.57e-08!13;CL:0002368!1.19e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.35e-21;13!CL:0002076;3.68e-21;42!CL:0002159;4.01e-20;14!CL:0002251;1.13e-14;20!CL:0000240;2.19e-12;6!CL:0000311;2.19e-12;6!CL:0000079;2.19e-12;6!CL:0000237;2.19e-12;6!CL:0002202;1.82e-11;9!CL:0002632;1.82e-11;9!CL:0002077;3.03e-10;34!CL:0000312;4.46e-10;5!CL:0000307;1.23e-09;3!CL:0002166;1.86e-09;3!CL:0002592;3.60e-09;3!CL:0002621;9.62e-09;3!CL:0000362;2.01e-08;9!CL:0000575;1.50e-07;2!CL:0002327;1.74e-07;4!CL:0000244;2.22e-07;4!CL:0000731;2.22e-07;4!CL:0000076;6.88e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.07e-28,42;CL:0002368,1.01e-21,13;CL:0000066,4.07e-21,253;CL:0000223,1.67e-20,58;CL:0002159,2.80e-20,14;CL:0002321,1.51e-16,250;CL:0002251,1.09e-14,20;CL:0000076,1.44e-13,63;CL:0000240,1.70e-12,6;CL:0000311,1.70e-12,6;CL:0000079,1.70e-12,6;CL:0000237,1.70e-12,6;CL:0000036,1.70e-12,6;CL:0000357,1.70e-12,6;CL:0000114,1.70e-12,6;CL:0002077,5.59e-12,34;CL:0002202,1.60e-11,9;CL:0002632,1.60e-11,9;CL:0000312,4.18e-10,5;CL:0000068,1.10e-09,3;CL:0000069,1.10e-09,3;CL:0000307,1.10e-09,3;CL:0000377,1.10e-09,3;CL:0002166,1.17e-09,3;CL:0002592,3.62e-09,3;CL:0002621,7.74e-09,3;CL:0000362,1.90e-08,9;CL:0000244,1.54e-07,4;CL:0000731,1.54e-07,4;CL:0000575,1.60e-07,2;CL:0002327,1.75e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;2.19e-12;6!CL:0000114;2.19e-12;6!CL:0000223;2.88e-11;58!CL:0000377;1.23e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!1.42e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.59e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.93e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!5.74e-10!42;UBERON:0003509!5.74e-10!42;UBERON:0004572!5.74e-10!42;UBERON:0000344!1.81e-07!12;UBERON:0006554!3.22e-07!44;UBERON:0000481!4.15e-07!347;UBERON:0004573!4.82e-07!33;UBERON:0004571!4.82e-07!33;UBERON:0001008!6.89e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;2.41e-12;13!UBERON:0003343;1.60e-11;4!UBERON:0004785;1.60e-11;4!UBERON:0003498;3.60e-09;3!UBERON:0005985;3.60e-09;3!UBERON:0001621;3.60e-09;3!UBERON:0001949;9.62e-09;3!UBERON:0000161;3.92e-08;19!UBERON:0000166;3.92e-08;19!UBERON:0000486;5.02e-08;12!UBERON:0000165;5.91e-08;28!UBERON:0000974;1.08e-07;6!UBERON:0000344;1.46e-07;20!UBERON:0000964;1.67e-07;4!UBERON:0010409;1.67e-07;4!UBERON:0001911;1.74e-07;4!UBERON:0001708;3.49e-07;4!UBERON:0008895;3.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,1.51e-12,13;UBERON:0003343,1.11e-11,4;UBERON:0004785,1.11e-11,4;UBERON:0003102,1.36e-09,99;UBERON:0001004,2.15e-09,74;UBERON:0001621,3.62e-09,3;UBERON:0000033,3.79e-09,56;UBERON:0001949,7.74e-09,3;UBERON:0000166,1.25e-08,22;UBERON:0000153,6.52e-08,62;UBERON:0007811,6.52e-08,62;UBERON:0000344,1.10e-07,20;UBERON:0000165,1.20e-07,29;UBERON:0000930,1.20e-07,29;UBERON:0001911,1.75e-07,4;UBERON:0005333,1.75e-07,4;UBERON:0008425,1.75e-07,4;UBERON:0005311,1.75e-07,4;UBERON:0000964,2.43e-07,4;UBERON:0010409,2.43e-07,4;UBERON:0004348,2.43e-07,4;UBERON:0005427,2.43e-07,4;UBERON:0001708,2.48e-07,4;UBERON:0008895,2.48e-07,4;UBERON:0001444,7.73e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0.975865597581014,0.738726348460727,0.408001382488506,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,9.19421224478927,2.409647350226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0,4.00724817121796,6.67411997011973,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,1.25849830862972,0,1.25396979922086,0.775250277507987,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0.22452937262617,0,0,3.79706263827252,0.183201743930407,0,0,3.05265836499774,0,0.506522046658319,0.132409180813219,0.286836620748814,0,0,2.1349799145941,0.74000264525148,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.245668634623536,0,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0.169560592310488,1.93260853163297,1.63647672354501,1.14721838155602,0.609868530647977,0.132529768321485,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,3.73150970389327,10.1161577931858,3.31745608958382,1.66659201285353,0,1.03993478527958,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,1.87467667973554,2.85569617938061,3.26082723657489,2.5971971583826,4.06887513919547,2.30029607499127,0,0,0,0,0,0,0,0,1.71072446022705,0,0.300343057843917,0,0.336393253036082,0,0.22001485746285,0,0,0,0,0,0.514414748524284,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,1.32845119707087,0.553107505625109,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.355123450626254,0.821271560138091,1.55776328755086,0.929683027679674,0.846016147141356,0.601519410909855,2.02578175658972,0,0.182091168006717,0,0.902399225814824,0.539107359730903,2.35304930753057,0,0.105551628892876,1.13733384070897,0.170093705276516,0.431831832204279,3.08454505380579,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0,0,4.59412430396938,0,0,0.580024309752732,0.308097234229289,0.15350367472613,0,0,0.435050081742686,0.255679882248303,0.0890320356467374,1.65284915360978,5.95789208831829,14.6754619368772,4.34978457678865,0.464845549297286,0,0,0.924100740528266,0.532306030317022,0,1.29726953372744,0.429374660225974,0,0,0,0,0,0.95460974377781,0,0,0,0.117812402345686,3.43710218674637,1.58510321173008,1.26377536871694,0,0.731140468893853,3.16950440270266,0,0,0,0,0.66343897524122,1.31535265576129,0,0,1.21746226177622,0.92947049429925,0.563391205064483,0,0,2.1400263088875,0,0,0,0,0,2.98288549449087,1.34060455107157,7.62236894029258,0,3.87454835404107,1.68471475667626,4.87773168890343,0.689170200620878,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0.422250816255987,0,0,0.755798243562828,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0,0,0,0.694499979733169,0,0,0,1.3269511191747,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0.182454789215666,0.782658475728359,1.94224303627274,0,0,0,0,0.60129367765797,0.103688191397247,0,0.330991955875499,0.627865836814451,0,0,0.138674673013139,0,3.03776431984571,2.61177619741208,0,0.171986032471617,0.19351266257817,0.146178634172371,0.0821154570532092,0.969890164884194,0,0,0.274083849293502,0.19871461170299,0,0.195551382734803,0,0,0,1.00863292007874,0.114536596165916,0,0.432164393964449,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0,0.412618309791701,0,0,3.86900977278975,0,3.35434687599266,0.157611414598396,0,0,0,0.575745591958336,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,12.7668251554036,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0.276697269872462,0.624902039810533,0,0,0.235265819698172,0,1.44921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0.591420599958536,0.159296767163702,0,0.776314784381297,0,0,0,0,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,1.95831310807222,1.24415452006595,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,3.33702242903487,1.1796972334774,1.83428598521679,1.84841065840541,0,1.3807198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| ||
|short_description=p10@PLEKHG5 | |||
}} | }} |
Latest revision as of 22:37, 18 September 2015
Short description: | p10@PLEKHG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PLEKHG5_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_ENST00000377725_5end |
EntrezGene: | PLEKHG5 |
HGNC: | 29105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 1.51e-12 | 13 |
mucosa of oral region | 1.11e-11 | 4 |
respiratory system mucosa | 1.11e-11 | 4 |
surface structure | 1.36e-09 | 99 |
respiratory system | 2.15e-09 | 74 |
coronary artery | 3.62e-09 | 3 |
head | 3.79e-09 | 56 |
gingival epithelium | 7.74e-09 | 3 |
oral opening | 1.25e-08 | 22 |
anterior region of body | 6.52e-08 | 62 |
craniocervical region | 6.52e-08 | 62 |
mucosa | 1.10e-07 | 20 |
mouth | 1.20e-07 | 29 |
stomodeum | 1.20e-07 | 29 |
mammary gland | 1.75e-07 | 4 |
mammary bud | 1.75e-07 | 4 |
mammary ridge | 1.75e-07 | 4 |
mammary placode | 1.75e-07 | 4 |
cornea | 2.43e-07 | 4 |
eye surface | 2.43e-07 | 4 |
optic eminence | 2.43e-07 | 4 |
corneal primordium | 2.43e-07 | 4 |
jaw skeleton | 2.48e-07 | 4 |
splanchnocranium | 2.48e-07 | 4 |
subdivision of head | 7.73e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.93e-15 | 14 |