FFCP PHASE1:Hg19::chr18:19749504..19749515,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:19749504..19749515,+
|short_description=p5@GATA6
|description=CAGE_peak_5_at_GATA6_5end
|association_with_transcript=88bp_to_NM_005257,uc002ktt.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2627 | |EntrezGene=2627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4174 | |HGNC=4174 | ||
|TSSclassifier=strong | |||
|UniProt=Q05CA6,Q92908 | |UniProt=Q05CA6,Q92908 | ||
|association_with_transcript=88bp_to_NM_005257,uc002ktt.1_5end | |||
|cluster_id=chr18:19749504..19749515,+ | |||
|coexpression_cluster_id=C3708 | |||
|description=CAGE_peak_5_at_GATA6_5end | |||
|id=chr18:19749504..19749515,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.58e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,4.75e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.18e-10!106;DOID:0050687!5.58e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.21e-20!118;UBERON:0004872!7.02e-14!84;UBERON:0001048!1.08e-13!168;UBERON:0004921!1.29e-13!129;UBERON:0004185!1.29e-13!129;UBERON:0000490!5.56e-13!138;UBERON:0001009!4.21e-12!113;UBERON:0002100!4.35e-12!216;UBERON:0003104!6.63e-12!238;UBERON:0009142!6.63e-12!238;UBERON:0001007!1.08e-11!155;UBERON:0001555!1.08e-11!155;UBERON:0007026!1.08e-11!155;UBERON:0007100!3.65e-11!27;UBERON:0004119!5.80e-11!169;UBERON:0000925!5.80e-11!169;UBERON:0006595!5.80e-11!169;UBERON:0004535!8.45e-11!110;UBERON:0009569!1.73e-10!113;UBERON:0000466!7.65e-10!126;UBERON:0000481!1.37e-09!347;UBERON:0000926!1.53e-09!448;UBERON:0004120!1.53e-09!448;UBERON:0006603!1.53e-09!448;UBERON:0003929!1.60e-09!54;UBERON:0005911!1.92e-09!82;UBERON:0000477!1.95e-09!286;UBERON:0000948!2.70e-09!24;UBERON:0005498!2.70e-09!24;UBERON:0004140!2.70e-09!24;UBERON:0009881!2.70e-09!24;UBERON:0004141!2.70e-09!24;UBERON:0003084!2.70e-09!24;UBERON:0007005!2.70e-09!24;UBERON:0004139!2.70e-09!24;UBERON:0004291!2.70e-09!24;UBERON:0001981!4.05e-09!60;UBERON:0007500!4.05e-09!60;UBERON:0004537!4.05e-09!60;UBERON:0006965!4.05e-09!60;UBERON:0002049!6.78e-09!79;UBERON:0007798!6.78e-09!79;UBERON:0004111!1.20e-08!241;UBERON:0000077!1.62e-08!130;UBERON:0001637!1.91e-08!42;UBERON:0003509!1.91e-08!42;UBERON:0004572!1.91e-08!42;UBERON:0000119!2.10e-08!312;UBERON:0000025!4.44e-08!194;UBERON:0000483!5.30e-08!309;UBERON:0000055!1.25e-07!69;UBERON:0004458!1.50e-07!49;UBERON:0003103!1.59e-07!69;UBERON:0007499!2.84e-07!25;UBERON:0002323!3.07e-07!46;UBERON:0009856!3.18e-07!26;UBERON:0001046!4.32e-07!19;UBERON:0005409!5.71e-07!35;UBERON:0000468!7.06e-07!659;UBERON:0002417!8.52e-07!61;UBERON:0000916!8.52e-07!61;UBERON:0005177!9.56e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.16e-14;25!UBERON:0000948;1.21e-11;22!UBERON:0005409;1.85e-09;22!UBERON:0000160;3.72e-08;17!UBERON:0002423;5.47e-07;25!UBERON:0001637;5.73e-07;42!UBERON:0003509;5.73e-07;42!UBERON:0004572;5.73e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.23e-22,117;UBERON:0007100,2.06e-15,27;UBERON:0004872,3.56e-14,83;UBERON:0001009,1.79e-12,112;UBERON:0000948,2.20e-12,24;UBERON:0005498,2.20e-12,24;UBERON:0004140,2.20e-12,24;UBERON:0009881,2.20e-12,24;UBERON:0004141,2.20e-12,24;UBERON:0003084,2.20e-12,24;UBERON:0007005,2.20e-12,24;UBERON:0004139,2.20e-12,24;UBERON:0004291,2.20e-12,24;UBERON:0004921,1.78e-11,118;UBERON:0004111,1.95e-11,240;UBERON:0000025,3.21e-11,192;UBERON:0002100,8.08e-11,199;UBERON:0004535,1.09e-10,109;UBERON:0001007,3.58e-10,145;UBERON:0001555,3.58e-10,145;UBERON:0007026,3.58e-10,145;UBERON:0003103,4.78e-10,68;UBERON:0003104,8.75e-10,160;UBERON:0009142,8.75e-10,160;UBERON:0001637,1.33e-09,42;UBERON:0003509,1.33e-09,42;UBERON:0004572,1.33e-09,42;UBERON:0000490,1.66e-09,148;UBERON:0005911,2.20e-09,82;UBERON:0003929,4.02e-09,54;UBERON:0001048,5.98e-09,160;UBERON:0004119,7.01e-09,160;UBERON:0000925,7.01e-09,160;UBERON:0006595,7.01e-09,160;UBERON:0005256,1.52e-08,122;UBERON:0007500,1.75e-08,59;UBERON:0001981,1.75e-08,59;UBERON:0004537,1.75e-08,59;UBERON:0006965,1.75e-08,59;UBERON:0000160,4.85e-08,17;UBERON:0005409,7.27e-08,25;UBERON:0000055,9.12e-08,68;UBERON:0002049,9.42e-08,78;UBERON:0007798,9.42e-08,78;UBERON:0000119,1.17e-07,309;UBERON:0000483,1.53e-07,306;UBERON:0009497,3.01e-07,25;UBERON:0000015,3.01e-07,25;UBERON:0002423,3.01e-07,25;UBERON:0006235,3.01e-07,25;UBERON:0004161,3.01e-07,25;UBERON:0009569,4.76e-07,112;UBERON:0007499,6.14e-07,25;UBERON:0004573,8.29e-07,33;UBERON:0004571,8.29e-07,33 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.986680828671798,1.0007329835313,1.78784437770915,0.872338524100369,0,0.631719873426831,0.261185628199839,1.72013755551056,11.8626198555313,0,0,0,0.662794751455832,0,0,0,0,0.861847406537515,0.612002073732759,0.626909442956176,0,0,0.125542639594803,0,0,0,0.786728553697808,0,0.154816123316076,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,4.87613732627923,0.670700859703636,2.9408389224012,0.722878304769133,0,0.434539556882471,0.795285947051099,0,0.189069634328136,0.443458794925128,0.702678285545008,0.785874452986276,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,1.69592382577203,2.93649605346934,1.37559020970034,0,0,0,0.33472061276467,0,0,0,0.735326160691737,0.81014194788176,0.357198913136319,0.44905874525234,1.12611480483322,1.53316637465883,0.949265659568129,0,0,0,0.436094052142534,0.496971951695318,1.64619665163954,1.58891016975863,6.02356903572509,1.77334191099179,1.12135520028461,1.06748995729705,1.72667283892012,1.24484414159907,1.0776853765575,1.47115712802113,2.57307626996383,2.88087962239999,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0.206651562351531,0,0,3.64064544775211,1.43723628363248,0,0,0,0,0,0,1.02088964844019,0.358779271377724,0,0.635795703478686,0,0,0.515281080091258,0.558350568994769,0,0.487185025805993,0.252433774244115,0.368199594569197,0.484938170456436,0.355009592516614,0,0.169560592310488,0,0.545492241181669,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0.354920400119532,1.01150814046861,0.482022059766964,0.220587945464788,0.653638332277218,0.237270619111097,0.539325232640658,0,0,0,0,1.2347220339942,2.94017422771084,2.53510069643662,0.982827216677626,2.95394953340702,0,6.64137568132813,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.115930404975077,1.52631302506568,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.672786506072164,1.74384027533312,0.22001485746285,0.646358578788889,0,0,0.797814349754612,0,0,0,0,1.00084595560703,0.542621605391443,2.46972101034231,0,2.13235169245527,2.37585561880029,0,0.871533458600294,2.49932477955143,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0.702848489956279,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,1.66580894032411,1.02341449813341,1.60853921143608,4.45254199334973,0.154209693802656,1.06537035187876,0.0821271560138091,0.519254429183621,0,1.93375119346596,0.601519410909855,1.19705285616665,1.7222167224691,1.27463817604702,0.917870904715969,0,0.0770153371044148,0.784349769176855,2.92278449306521,0.211103257785751,0,0,0.863663664408557,0,1.35473218771926,1.00337954770971,0,0,0.223874754722178,0,0,0.256450125116389,3.60816110269676,0.650756789328606,1.54561517471583,0,0,0,0.650060246036521,1.6068392984416,0.773365746336976,0,0,0,0,0,0.170453254832202,0.356128142586949,0.991709492165869,1.72971060628596,0.255225424989168,1.6185244936888,1.39453664789186,2.20368642781448,0.6970372701606,2.46426864140871,0.532306030317022,0.869932992075073,0.37064843820784,1.43124886741991,0,0.632758849437452,1.71567174531442,0.767693373934002,0,3.18203247925937,2.35484592059769,0.179872457583315,2.19629623788844,1.17812402345686,1.61745985258653,0,0,0.975267478179181,1.70599442741899,1.05650146756755,0.272999822815972,2.12108147930569,1.13008116620243,1.65409603063837,0,3.06915619677634,0,0,1.42037263873893,1.239293992399,0.563391205064483,1.43411352204052,0.982490410131212,1.07001315444375,0,0,1.31717957183961,0,0.349934720244983,0.384888450902048,1.34060455107157,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,4.86565405061372,0.586032717087576,0.121360521749513,0,1.42068073403207,0,0,0,0,0,2.67140892054974,0,0,9.16540745954921,0.276283915531148,0.503865495708552,0.920418142519393,0,1.86623752597084,1.79736702294654,1.79021174675609,0,5.32674390439441,0,2.22273980289274,0,0,0,0.260427761085233,0.699679999969566,1.44999915086959,1.70690172428249,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0.653630781113941,0.697118721393016,0.769502585037971,1.13942055847001,0.922255617552241,1.07709173291727,0.760531603454056,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0.421996129056054,1.14262965711403,4.38194521445217,0,8.95735737970654,1.06149077404007,3.66618086960175,0.593042257361244,0.741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|short_description=p5@GATA6 | |||
}} | }} |
Latest revision as of 22:42, 18 September 2015
Short description: | p5@GATA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GATA6_5end |
Coexpression cluster: | C3708_stomach_colon_hepatoblastoma_ovary_heart_Hepatic_mesothelioma |
Association with transcript: | 88bp_to_NM_005257, uc002ktt.1_5end |
EntrezGene: | GATA6 |
HGNC: | 4174 |
UniProt: | Q05CA6Q92908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 4.75e-07 | 16 |