FFCP PHASE1:Hg19::chrX:107683096..107683121,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1287 | |EntrezGene=1287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2207 | |HGNC=2207 | ||
|TSSclassifier=strong | |||
|UniProt=P29400 | |UniProt=P29400 | ||
|association_with_transcript=0bp_to_ENST00000328300,ENST00000361603_5end | |association_with_transcript=0bp_to_ENST00000328300,ENST00000361603_5end | ||
|cluster_id=chrX:107683096..107683121,+ | |||
|coexpression_cluster_id=C4843 | |||
|description=CAGE_peak_3_at_COL4A5_5end | |description=CAGE_peak_3_at_COL4A5_5end | ||
|id=chrX:107683096..107683121,+ | |id=chrX:107683096..107683121,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.71e-17!254;CL:0002321!5.31e-11!248;CL:0000220!1.00e-10!246;CL:0002076!4.72e-08!43 | |ontology_enrichment_celltype=CL:0000066!6.71e-17!254;CL:0002321!5.31e-11!248;CL:0000220!1.00e-10!246;CL:0002076!4.72e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.64e-09;42!CL:0002251;2.23e-09;20!CL:0000154;3.05e-08;6!CL:0000622;1.16e-07;5!CL:0000150;5.21e-07;9!CL:0002368;5.70e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.00e-12,253;CL:0002076,2.72e-11,42;CL:0002251,2.11e-09,20;CL:0000154,1.82e-08,6;CL:0000223,2.45e-08,58;CL:0002321,5.81e-08,250;CL:0000622,8.55e-08,5;CL:0000150,4.99e-07,9;CL:0002368,5.74e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.18e-18!347;UBERON:0004119!2.78e-17!169;UBERON:0000925!2.78e-17!169;UBERON:0006595!2.78e-17!169;UBERON:0000922!2.11e-16!612;UBERON:0000468!1.11e-14!659;UBERON:0002050!4.27e-14!605;UBERON:0005423!4.27e-14!605;UBERON:0000923!1.26e-13!604;UBERON:0005291!1.26e-13!604;UBERON:0006598!1.26e-13!604;UBERON:0002532!1.26e-13!604;UBERON:0001007!3.08e-13!155;UBERON:0001555!3.08e-13!155;UBERON:0007026!3.08e-13!155;UBERON:0000483!3.59e-13!309;UBERON:0003104!5.12e-13!238;UBERON:0009142!5.12e-13!238;UBERON:0000119!8.52e-13!312;UBERON:0000477!1.80e-12!286;UBERON:0000467!1.07e-11!625;UBERON:0000480!1.56e-11!626;UBERON:0004921!9.09e-11!129;UBERON:0004185!9.09e-11!129;UBERON:0000475!3.35e-10!365;UBERON:0004111!1.06e-09!241;UBERON:0000062!1.36e-09!511;UBERON:0000077!2.69e-09!130;UBERON:0005911!2.77e-09!82;UBERON:0001004!3.09e-09!72;UBERON:0001048!3.65e-09!168;UBERON:0000064!5.29e-09!219;UBERON:0002100!5.71e-08!216;UBERON:0005256!7.44e-08!143;UBERON:0002530!2.18e-07!59;UBERON:0005156!2.51e-07!59;UBERON:0000990!2.51e-07!59;UBERON:0000161!3.01e-07!35;UBERON:0000490!3.09e-07!138 | |ontology_enrichment_uberon=UBERON:0000481!6.18e-18!347;UBERON:0004119!2.78e-17!169;UBERON:0000925!2.78e-17!169;UBERON:0006595!2.78e-17!169;UBERON:0000922!2.11e-16!612;UBERON:0000468!1.11e-14!659;UBERON:0002050!4.27e-14!605;UBERON:0005423!4.27e-14!605;UBERON:0000923!1.26e-13!604;UBERON:0005291!1.26e-13!604;UBERON:0006598!1.26e-13!604;UBERON:0002532!1.26e-13!604;UBERON:0001007!3.08e-13!155;UBERON:0001555!3.08e-13!155;UBERON:0007026!3.08e-13!155;UBERON:0000483!3.59e-13!309;UBERON:0003104!5.12e-13!238;UBERON:0009142!5.12e-13!238;UBERON:0000119!8.52e-13!312;UBERON:0000477!1.80e-12!286;UBERON:0000467!1.07e-11!625;UBERON:0000480!1.56e-11!626;UBERON:0004921!9.09e-11!129;UBERON:0004185!9.09e-11!129;UBERON:0000475!3.35e-10!365;UBERON:0004111!1.06e-09!241;UBERON:0000062!1.36e-09!511;UBERON:0000077!2.69e-09!130;UBERON:0005911!2.77e-09!82;UBERON:0001004!3.09e-09!72;UBERON:0001048!3.65e-09!168;UBERON:0000064!5.29e-09!219;UBERON:0002100!5.71e-08!216;UBERON:0005256!7.44e-08!143;UBERON:0002530!2.18e-07!59;UBERON:0005156!2.51e-07!59;UBERON:0000990!2.51e-07!59;UBERON:0000161!3.01e-07!35;UBERON:0000490!3.09e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;8.79e-08;12!UBERON:0000365;1.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.37e-13,160;UBERON:0000925,2.37e-13,160;UBERON:0006595,2.37e-13,160;UBERON:0000922,1.03e-10,592;UBERON:0002050,2.63e-10,564;UBERON:0005423,2.29e-09,581;UBERON:0000923,3.81e-09,560;UBERON:0010316,3.81e-09,560;UBERON:0005291,3.81e-09,560;UBERON:0006598,3.81e-09,560;UBERON:0010317,3.81e-09,560;UBERON:0002532,3.81e-09,560;UBERON:0001007,6.26e-09,145;UBERON:0001555,6.26e-09,145;UBERON:0007026,6.26e-09,145;UBERON:0000365,1.42e-07,5;UBERON:0004921,2.36e-07,118;UBERON:0002530,4.47e-07,59;UBERON:0002365,9.98e-07,31;UBERON:0002330,9.98e-07,31 | |||
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| ||
|short_description=p3@COL4A5 | |short_description=p3@COL4A5 | ||
}} | }} |
Latest revision as of 23:37, 18 September 2015
Short description: | p3@COL4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL4A5_5end |
Coexpression cluster: | C4843_Small_amniotic_uterus_Amniotic_smooth_Mesenchymal_salivary |
Association with transcript: | 0bp_to_ENST00000328300, ENST00000361603_5end |
EntrezGene: | COL4A5 |
HGNC: | 2207 |
UniProt: | P29400 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.00e-12 | 253 |
endo-epithelial cell | 2.72e-11 | 42 |
epithelial cell of alimentary canal | 2.11e-09 | 20 |
protein secreting cell | 1.82e-08 | 6 |
endodermal cell | 2.45e-08 | 58 |
embryonic cell | 5.81e-08 | 250 |
acinar cell | 8.55e-08 | 5 |
glandular epithelial cell | 4.99e-07 | 9 |
respiratory epithelial cell | 5.74e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.37e-13 | 160 |
endoderm | 2.37e-13 | 160 |
presumptive endoderm | 2.37e-13 | 160 |
embryo | 1.03e-10 | 592 |
embryonic structure | 2.63e-10 | 564 |
developing anatomical structure | 2.29e-09 | 581 |
germ layer | 3.81e-09 | 560 |
germ layer / neural crest | 3.81e-09 | 560 |
embryonic tissue | 3.81e-09 | 560 |
presumptive structure | 3.81e-09 | 560 |
germ layer / neural crest derived structure | 3.81e-09 | 560 |
epiblast (generic) | 3.81e-09 | 560 |
digestive system | 6.26e-09 | 145 |
digestive tract | 6.26e-09 | 145 |
primitive gut | 6.26e-09 | 145 |
urothelium | 1.42e-07 | 5 |
subdivision of digestive tract | 2.36e-07 | 118 |
gland | 4.47e-07 | 59 |
exocrine gland | 9.98e-07 | 31 |
exocrine system | 9.98e-07 | 31 |