FFCP PHASE1:Hg19::chr3:52504566..52504578,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18006 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000488157,ENST00000490425_5end | |||
|cluster_id=chr3:52504566..52504578,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_25_at_NISCH_5end | |||
|id=chr3:52504566..52504578,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.65e-17;10!UBERON:0005564;6.65e-17;10!UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.62e-23!115;UBERON:0003135!9.13e-14!11;UBERON:0006947!4.03e-13!3;UBERON:0004054!4.03e-13!3;UBERON:0001896!5.81e-13!3;UBERON:0005290!5.81e-13!3;UBERON:0010096!5.81e-13!3;UBERON:0000473!3.52e-11!8;UBERON:0003075!6.94e-11!86;UBERON:0007284!6.94e-11!86;UBERON:0002363!1.08e-10!1;UBERON:0007647!1.08e-10!1;UBERON:0010115!1.08e-10!1;UBERON:0002298!1.19e-10!8;UBERON:0000998!1.30e-10!1;UBERON:0006868!1.30e-10!1;UBERON:0002146!1.89e-10!1;UBERON:0005623!1.89e-10!1;UBERON:0003101!2.05e-10!22;UBERON:0000079!2.05e-10!22;UBERON:0002346!2.49e-10!90;UBERON:0001301!2.50e-10!1;UBERON:0003296!2.75e-10!4;UBERON:0010133!2.75e-10!4;UBERON:0002038!3.29e-10!1;UBERON:0009661!3.29e-10!1;UBERON:0001882!4.33e-10!1;UBERON:0005403!4.33e-10!1;UBERON:0005904!4.55e-10!4;UBERON:0001049!5.83e-09!57;UBERON:0005068!5.83e-09!57;UBERON:0006241!5.83e-09!57;UBERON:0007135!5.83e-09!57;UBERON:0005743!8.25e-09!86;UBERON:0002616!1.25e-08!59;UBERON:0000073!7.47e-08!94;UBERON:0001016!7.47e-08!94;UBERON:0001017!1.81e-07!82;UBERON:0004733!2.58e-07!12;UBERON:0002028!2.58e-07!12;UBERON:0007277!2.58e-07!12;UBERON:0000955!3.89e-07!69;UBERON:0006238!3.89e-07!69;UBERON:0005156!6.93e-07!59;UBERON:0000990!6.93e-07!59;UBERON:0004732!8.71e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.15e-21;2!UBERON:0000473;7.72e-21;8!UBERON:0003135;1.81e-15;11!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0000966;3.10e-09;5!UBERON:0005388;3.10e-09;5!UBERON:0001802;3.10e-09;5!UBERON:0000991;1.34e-08;21!UBERON:0003101;2.98e-08;22!UBERON:0000079;2.98e-08;22!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.66e-21,2;UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0003296,3.10e-11,4;UBERON:0010133,3.10e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,1.21393120847326,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72803313585662,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@NISCH | |||
}} |
Latest revision as of 00:01, 19 September 2015
Short description: | p25@NISCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_NISCH_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000488157, ENST00000490425_5end |
EntrezGene: | NISCH |
HGNC: | 18006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.66e-21 | 2 |
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gland of diencephalon | 3.10e-11 | 4 |
neuroendocrine gland | 3.10e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
diencephalon | 5.70e-07 | 7 |
future diencephalon | 5.70e-07 | 7 |