FFCP PHASE1:Hg19::chr15:74495188..74495220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64220 | |EntrezGene=64220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30650 | |HGNC=30650 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BX79,B3KPB8 | |UniProt=Q9BX79,B3KPB8 | ||
|association_with_transcript=0bp_to_ENST00000395105,NM_001199042,NM_022369,uc002axk.2_5end | |association_with_transcript=0bp_to_ENST00000395105,NM_001199042,NM_022369,uc002axk.2_5end | ||
|cluster_id=chr15:74495188..74495220,- | |||
|coexpression_cluster_id=C2348 | |||
|description=CAGE_peak_5_at_STRA6_5end | |description=CAGE_peak_5_at_STRA6_5end | ||
|id=chr15:74495188..74495220,- | |id=chr15:74495188..74495220,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.23e-13;3!CL:0000067;1.23e-13;3!CL:0005012;1.23e-13;3!CL:0002304;1.23e-13;3!CL:0000306;4.35e-10;4!CL:0002222;4.35e-10;4!CL:0002224;4.35e-10;4!CL:0000123;3.18e-09;2!CL:0000242;3.18e-09;2!CL:0002549;5.22e-09;2!CL:0000075;8.09e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.18e-13,3;CL:0000067,1.18e-13,3;CL:0005012,1.18e-13,3;CL:0002304,1.18e-13,3;CL:0000306,3.45e-10,4;CL:0002222,3.45e-10,4;CL:0002224,3.45e-10,4;CL:0000242,3.12e-09,2;CL:0002549,6.55e-09,2;CL:0000075,7.60e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.90e-09!143;DOID:3095!4.28e-07!22;DOID:2994!4.28e-07!22 | |ontology_enrichment_disease=DOID:0050687!6.90e-09!143;DOID:3095!4.28e-07!22;DOID:2994!4.28e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!1.73e-14!23;UBERON:0001032!1.13e-13!24;UBERON:0004456!1.13e-13!24;UBERON:0000970!1.40e-13!20;UBERON:0002104!1.01e-12!21;UBERON:0000019!2.16e-12!19;UBERON:0000047!2.16e-12!19;UBERON:0004088!2.16e-12!19;UBERON:0003072!2.16e-12!19;UBERON:0003071!2.16e-12!19;UBERON:0004128!2.16e-12!19;UBERON:0007625!1.12e-11!11;UBERON:0002200!3.54e-11!11;UBERON:0006876!3.54e-11!11;UBERON:0001456!7.75e-11!21;UBERON:0002203!3.45e-10!6;UBERON:0001768!3.45e-10!6;UBERON:0001801!1.62e-08!14;UBERON:0003124!7.36e-08!7;UBERON:0005085!8.36e-08!29;UBERON:0000488!9.08e-08!4;UBERON:0001048!2.37e-07!168;UBERON:0005631!3.07e-07!14;UBERON:0000158!3.07e-07!14;UBERON:0001264!4.73e-07!10;UBERON:0003922!4.73e-07!10;UBERON:0003923!4.73e-07!10;UBERON:0003924!4.73e-07!10;UBERON:0003921!4.73e-07!10;UBERON:0002114!7.67e-07!12 | |ontology_enrichment_uberon=UBERON:0000020!1.73e-14!23;UBERON:0001032!1.13e-13!24;UBERON:0004456!1.13e-13!24;UBERON:0000970!1.40e-13!20;UBERON:0002104!1.01e-12!21;UBERON:0000019!2.16e-12!19;UBERON:0000047!2.16e-12!19;UBERON:0004088!2.16e-12!19;UBERON:0003072!2.16e-12!19;UBERON:0003071!2.16e-12!19;UBERON:0004128!2.16e-12!19;UBERON:0007625!1.12e-11!11;UBERON:0002200!3.54e-11!11;UBERON:0006876!3.54e-11!11;UBERON:0001456!7.75e-11!21;UBERON:0002203!3.45e-10!6;UBERON:0001768!3.45e-10!6;UBERON:0001801!1.62e-08!14;UBERON:0003124!7.36e-08!7;UBERON:0005085!8.36e-08!29;UBERON:0000488!9.08e-08!4;UBERON:0001048!2.37e-07!168;UBERON:0005631!3.07e-07!14;UBERON:0000158!3.07e-07!14;UBERON:0001264!4.73e-07!10;UBERON:0003922!4.73e-07!10;UBERON:0003923!4.73e-07!10;UBERON:0003924!4.73e-07!10;UBERON:0003921!4.73e-07!10;UBERON:0002114!7.67e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.44e-23;11!UBERON:0000970;2.53e-19;20!UBERON:0002104;2.62e-18;21!UBERON:0006876;7.23e-18;11!UBERON:0000488;7.64e-18;4!UBERON:0000019;1.08e-16;19!UBERON:0000047;1.08e-16;19!UBERON:0004088;1.08e-16;19!UBERON:0010230;1.08e-16;19!UBERON:0000020;1.53e-16;23!UBERON:0001032;9.06e-16;24!UBERON:0004456;9.06e-16;24!UBERON:0001456;6.05e-15;21!UBERON:0001801;3.44e-14;14!UBERON:0001778;1.23e-13;3!UBERON:0001775;1.23e-13;3!UBERON:0002203;6.40e-12;6!UBERON:0001768;6.40e-12;6!UBERON:0002200;6.40e-12;6!UBERON:0010371;5.41e-11;31!UBERON:0010077;4.35e-10;4!UBERON:0005389;4.35e-10;4!UBERON:0000484;4.35e-10;4!UBERON:0000965;4.35e-10;4!UBERON:0001803;4.35e-10;4!UBERON:0001905;5.22e-09;2!UBERON:0005629;5.22e-09;2!UBERON:0002757;5.22e-09;2!UBERON:0010134;5.22e-09;2!UBERON:0005358;5.22e-09;2!UBERON:0005408;5.22e-09;2!UBERON:0001886;5.22e-09;2!UBERON:0004086;5.22e-09;2!UBERON:0001899;5.22e-09;2!UBERON:0005282;5.22e-09;2!UBERON:0005281;5.22e-09;2!UBERON:0005284;1.02e-07;5!UBERON:0001264;2.56e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,9.18e-24,11;UBERON:0000970,2.07e-18,21;UBERON:0002104,2.07e-18,21;UBERON:0000488,7.03e-18,4;UBERON:0006876,9.14e-18,11;UBERON:0000019,6.95e-16,20;UBERON:0000047,6.95e-16,20;UBERON:0010312,6.95e-16,20;UBERON:0004088,6.95e-16,20;UBERON:0010230,6.95e-16,20;UBERON:0003072,6.95e-16,20;UBERON:0004128,6.95e-16,20;UBERON:0003071,6.95e-16,20;UBERON:0000020,7.39e-16,24;UBERON:0001032,7.39e-16,24;UBERON:0004456,7.39e-16,24;UBERON:0001456,2.75e-14,22;UBERON:0001801,2.84e-14,14;UBERON:0001778,1.18e-13,3;UBERON:0001775,1.18e-13,3;UBERON:0002203,6.06e-12,6;UBERON:0001768,6.06e-12,6;UBERON:0002200,6.06e-12,6;UBERON:0010077,3.45e-10,4;UBERON:0005389,3.45e-10,4;UBERON:0000484,3.45e-10,4;UBERON:0002546,3.45e-10,4;UBERON:0000965,3.45e-10,4;UBERON:0001803,3.45e-10,4;UBERON:0003073,3.45e-10,4;UBERON:0005426,3.45e-10,4;UBERON:0005085,1.18e-09,31;UBERON:0005629,6.55e-09,2;UBERON:0005358,6.55e-09,2;UBERON:0001886,6.55e-09,2;UBERON:0004086,6.55e-09,2;UBERON:0005282,6.55e-09,2;UBERON:0005281,6.55e-09,2;UBERON:0001905,7.71e-09,2;UBERON:0002757,7.71e-09,2;UBERON:0010134,7.71e-09,2;UBERON:0005408,7.71e-09,2;UBERON:0001899,7.71e-09,2;UBERON:0005284,1.32e-07,5;UBERON:0001264,2.69e-07,10;UBERON:0001444,7.53e-07,49 | |||
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|short_description=p5@STRA6 | |short_description=p5@STRA6 | ||
}} | }} |
Latest revision as of 00:44, 19 September 2015
Short description: | p5@STRA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_STRA6_5end |
Coexpression cluster: | C2348_gastric_Iris_retina_papillotubular_neuroblastoma_Ciliary_embryonic |
Association with transcript: | 0bp_to_ENST00000395105, NM_001199042, NM_022369, uc002axk.2_5end |
EntrezGene: | STRA6 |
HGNC: | 30650 |
UniProt: | Q9BX79B3KPB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.18e-13 | 3 |
ciliated epithelial cell | 1.18e-13 | 3 |
multi-ciliated epithelial cell | 1.18e-13 | 3 |
non-pigmented ciliary epithelial cell | 1.18e-13 | 3 |
crystallin accumulating cell | 3.45e-10 | 4 |
vertebrate lens cell | 3.45e-10 | 4 |
lens epithelial cell | 3.45e-10 | 4 |
Merkel cell | 3.12e-09 | 2 |
fibroblast of choroid plexus | 6.55e-09 | 2 |
columnar/cuboidal epithelial cell | 7.60e-07 | 27 |