FFCP PHASE1:Hg19::chr12:53205625..53205638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3851 | |EntrezGene=3851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6441 | |HGNC=6441 | ||
|TSSclassifier=strong | |||
|UniProt=P19013 | |UniProt=P19013 | ||
|association_with_transcript=0bp_to_BC003630_5end | |association_with_transcript=0bp_to_BC003630_5end | ||
|cluster_id=chr12:53205625..53205638,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_6_at_KRT4_5end | |description=CAGE_peak_6_at_KRT4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.48e-40;1!UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2 | |ontology_enrichment_development_v019=UBERON:0009143;1.48e-40;1!UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2 | ||
|ontology_enrichment_disease=DOID:1749!2.29e-16!14;DOID:3910!2.31e-08!2 | |ontology_enrichment_disease=DOID:1749!2.29e-16!14;DOID:3910!2.31e-08!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.01e-20!3;UBERON:0001033!3.01e-20!3;UBERON:0010056!3.01e-20!3;UBERON:0002372!8.63e-16!1;UBERON:0001961!8.63e-16!1;UBERON:0001744!8.63e-16!1;UBERON:0001735!8.63e-16!1;UBERON:0000997!3.17e-15!1;UBERON:0005056!3.17e-15!1;UBERON:0001042!1.24e-13!10;UBERON:0009145!1.24e-13!10;UBERON:0006562!1.90e-12!11;UBERON:0000166!2.94e-11!21;UBERON:0000002!2.77e-10!6;UBERON:0001560!2.77e-10!6;UBERON:0000341!1.20e-08!2;UBERON:0000165!1.67e-08!28;UBERON:0000930!1.67e-08!28;UBERON:0004903!2.31e-08!2;UBERON:0002173!2.31e-08!2;UBERON:0002186!2.31e-08!2;UBERON:0003127!2.48e-08!2;UBERON:0000078!8.03e-08!18;UBERON:0000072!9.42e-08!46;UBERON:0001557!1.95e-07!19;UBERON:0001004!7.47e-07!72;UBERON:0000161!7.65e-07!35 | |ontology_enrichment_uberon=UBERON:0001723!3.01e-20!3;UBERON:0001033!3.01e-20!3;UBERON:0010056!3.01e-20!3;UBERON:0002372!8.63e-16!1;UBERON:0001961!8.63e-16!1;UBERON:0001744!8.63e-16!1;UBERON:0001735!8.63e-16!1;UBERON:0000997!3.17e-15!1;UBERON:0005056!3.17e-15!1;UBERON:0001042!1.24e-13!10;UBERON:0009145!1.24e-13!10;UBERON:0006562!1.90e-12!11;UBERON:0000166!2.94e-11!21;UBERON:0000002!2.77e-10!6;UBERON:0001560!2.77e-10!6;UBERON:0000341!1.20e-08!2;UBERON:0000165!1.67e-08!28;UBERON:0000930!1.67e-08!28;UBERON:0004903!2.31e-08!2;UBERON:0002173!2.31e-08!2;UBERON:0002186!2.31e-08!2;UBERON:0003127!2.48e-08!2;UBERON:0000078!8.03e-08!18;UBERON:0000072!9.42e-08!46;UBERON:0001557!1.95e-07!19;UBERON:0001004!7.47e-07!72;UBERON:0000161!7.65e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.28e-53;3!UBERON:0001033;3.28e-53;3!UBERON:0002372;2.70e-40;1!UBERON:0001961;2.70e-40;1!UBERON:0001744;2.70e-40;1!UBERON:0001042;2.70e-40;1!UBERON:0001735;2.70e-40;1!UBERON:0000341;3.11e-21;2!UBERON:0006562;6.30e-21;2!UBERON:0001043;1.60e-14;3!UBERON:0000165;1.66e-13;28!UBERON:0000974;5.54e-08;6!UBERON:0000020;6.63e-08;23!UBERON:0001032;1.29e-07;24!UBERON:0004456;1.29e-07;24!UBERON:0000153;1.94e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0001723;3.28e-53;3!UBERON:0001033;3.28e-53;3!UBERON:0002372;2.70e-40;1!UBERON:0001961;2.70e-40;1!UBERON:0001744;2.70e-40;1!UBERON:0001042;2.70e-40;1!UBERON:0001735;2.70e-40;1!UBERON:0000341;3.11e-21;2!UBERON:0006562;6.30e-21;2!UBERON:0001043;1.60e-14;3!UBERON:0000165;1.66e-13;28!UBERON:0000974;5.54e-08;6!UBERON:0000020;6.63e-08;23!UBERON:0001032;1.29e-07;24!UBERON:0004456;1.29e-07;24!UBERON:0000153;1.94e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.75e-53,3;UBERON:0001033,3.75e-53,3;UBERON:0010056,3.75e-53,3;UBERON:0002372,2.21e-40,1;UBERON:0001961,2.21e-40,1;UBERON:0001744,2.21e-40,1;UBERON:0001735,2.21e-40,1;UBERON:0001042,4.37e-36,10;UBERON:0009145,4.37e-36,10;UBERON:0006562,6.65e-33,11;UBERON:0000341,3.11e-21,2;UBERON:0001557,1.79e-19,19;UBERON:0000166,6.04e-17,22;UBERON:0001043,1.60e-14,3;UBERON:0009143,1.60e-14,3;UBERON:0000165,4.54e-13,29;UBERON:0000930,4.54e-13,29;UBERON:0000153,6.67e-11,62;UBERON:0007811,6.67e-11,62;UBERON:0000161,1.09e-10,36;UBERON:0008814,8.11e-10,18;UBERON:0000072,2.27e-08,47;UBERON:0001444,4.65e-08,49;UBERON:0001041,6.20e-08,87;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24;UBERON:0000065,2.22e-07,54;UBERON:0000033,3.84e-07,56 | |||
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|short_description=p6@KRT4 | |short_description=p6@KRT4 | ||
}} | }} |
Latest revision as of 00:47, 19 September 2015
Short description: | p6@KRT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KRT4_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_BC003630_5end |
EntrezGene: | KRT4 |
HGNC: | 6441 |
UniProt: | P19013 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.75e-53 | 3 |
gustatory system | 3.75e-53 | 3 |
future tongue | 3.75e-53 | 3 |
tonsil | 2.21e-40 | 1 |
mucosa-associated lymphoid tissue | 2.21e-40 | 1 |
lymphoid tissue | 2.21e-40 | 1 |
tonsillar ring | 2.21e-40 | 1 |
chordate pharynx | 4.37e-36 | 10 |
pharyngeal region of foregut | 4.37e-36 | 10 |
pharynx | 6.65e-33 | 11 |
throat | 3.11e-21 | 2 |
upper respiratory tract | 1.79e-19 | 19 |
oral opening | 6.04e-17 | 22 |
esophagus | 1.60e-14 | 3 |
esophageal region | 1.60e-14 | 3 |
mouth | 4.54e-13 | 29 |
stomodeum | 4.54e-13 | 29 |
anterior region of body | 6.67e-11 | 62 |
craniocervical region | 6.67e-11 | 62 |
orifice | 1.09e-10 | 36 |
pharyngeal arch system | 8.11e-10 | 18 |
segment of respiratory tract | 2.27e-08 | 47 |
subdivision of head | 4.65e-08 | 49 |
foregut | 6.20e-08 | 87 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |
respiratory tract | 2.22e-07 | 54 |
head | 3.84e-07 | 56 |