FFCP PHASE1:Hg19::chr10:71176627..71176638,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6865 | |EntrezGene=6865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11527 | |HGNC=11527 | ||
|TSSclassifier=strong | |||
|UniProt=P21452 | |UniProt=P21452 | ||
|association_with_transcript=-4bp_to_ENST00000373306_5end | |association_with_transcript=-4bp_to_ENST00000373306_5end | ||
|cluster_id=chr10:71176627..71176638,- | |||
|coexpression_cluster_id=C727 | |coexpression_cluster_id=C727 | ||
|description=CAGE_peak_3_at_TACR2_5end | |description=CAGE_peak_3_at_TACR2_5end | ||
|id=chr10:71176627..71176638,- | |id=chr10:71176627..71176638,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.55e-14;1!UBERON:0001045;1.83e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.93e-19!11;UBERON:0000160!2.13e-18!27;UBERON:0007023!9.36e-16!115;UBERON:0001155!1.52e-15!9;UBERON:0005409!4.43e-14!35;UBERON:0001046!6.43e-11!19;UBERON:0004921!3.32e-10!129;UBERON:0004185!3.32e-10!129;UBERON:0006834!5.31e-10!1;UBERON:0001154!1.25e-09!1;UBERON:0001153!1.25e-09!1;UBERON:0000996!1.36e-09!1;UBERON:0000989!1.48e-09!1;UBERON:0008811!1.48e-09!1;UBERON:0006258!1.48e-09!1;UBERON:0005876!1.48e-09!1;UBERON:0004874!1.48e-09!1;UBERON:0001007!1.99e-09!155;UBERON:0001555!1.99e-09!155;UBERON:0007026!1.99e-09!155;UBERON:0001301!2.67e-09!1;UBERON:0004119!1.97e-08!169;UBERON:0000925!1.97e-08!169;UBERON:0006595!1.97e-08!169;UBERON:0004907!1.12e-07!5 | |ontology_enrichment_uberon=UBERON:0000059!1.93e-19!11;UBERON:0000160!2.13e-18!27;UBERON:0007023!9.36e-16!115;UBERON:0001155!1.52e-15!9;UBERON:0005409!4.43e-14!35;UBERON:0001046!6.43e-11!19;UBERON:0004921!3.32e-10!129;UBERON:0004185!3.32e-10!129;UBERON:0006834!5.31e-10!1;UBERON:0001154!1.25e-09!1;UBERON:0001153!1.25e-09!1;UBERON:0000996!1.36e-09!1;UBERON:0000989!1.48e-09!1;UBERON:0008811!1.48e-09!1;UBERON:0006258!1.48e-09!1;UBERON:0005876!1.48e-09!1;UBERON:0004874!1.48e-09!1;UBERON:0001007!1.99e-09!155;UBERON:0001555!1.99e-09!155;UBERON:0007026!1.99e-09!155;UBERON:0001301!2.67e-09!1;UBERON:0004119!1.97e-08!169;UBERON:0000925!1.97e-08!169;UBERON:0006595!1.97e-08!169;UBERON:0004907!1.12e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.74e-43;17!UBERON:0005409;9.53e-34;22!UBERON:0000059;1.51e-28;11!UBERON:0004921;1.36e-26;33!UBERON:0001155;1.11e-22;9!UBERON:0002108;1.34e-22;4!UBERON:0006834;5.15e-14;1!UBERON:0001154;1.83e-13;1!UBERON:0000996;1.83e-13;1!UBERON:0001153;1.83e-13;1!UBERON:0009854;1.83e-13;1!UBERON:0001555;1.95e-11;54!UBERON:0004907;7.70e-11;5!UBERON:0001255;1.64e-07;2!UBERON:0001556;1.64e-07;2!UBERON:0001007;4.28e-07;81!UBERON:0003975;9.58e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.38e-43,17;UBERON:0005409,8.04e-30,25;UBERON:0000059,1.46e-28,11;UBERON:0001155,1.11e-22,9;UBERON:0002108,1.15e-22,4;UBERON:0001046,3.88e-16,19;UBERON:0006834,5.15e-14,1;UBERON:0004921,1.58e-13,118;UBERON:0001154,1.83e-13,1;UBERON:0001153,1.83e-13,1;UBERON:0001045,1.83e-13,1;UBERON:0000996,2.07e-13,1;UBERON:0007023,7.43e-12,114;UBERON:0004907,7.51e-11,5;UBERON:0001007,9.66e-11,145;UBERON:0001555,9.66e-11,145;UBERON:0007026,9.66e-11,145;UBERON:0004119,1.36e-09,160;UBERON:0000925,1.36e-09,160;UBERON:0006595,1.36e-09,160;UBERON:0000162,1.79e-08,14;UBERON:0001353,1.79e-08,14;UBERON:0000163,1.79e-08,14;UBERON:0006866,1.79e-08,14;UBERON:0000164,1.79e-08,14;UBERON:0000931,1.79e-08,14;UBERON:0004122,6.07e-08,15;UBERON:0011216,1.33e-07,223;UBERON:0001255,1.64e-07,2;UBERON:0001556,1.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,5.22810049875748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46311499322023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8768102080411,17.7799704651712,10.9985426088053,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,6.11030803877042,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10205103528341,0,0,7.30526976407596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47936522566407,1.74847648403166,0,12.992861052957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0,0,8.06793531606919,0,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,5.22810049875748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46311499322023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8768102080411,17.7799704651712,10.9985426088053,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,6.11030803877042,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10205103528341,0,0,7.30526976407596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47936522566407,1.74847648403166,0,12.992861052957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0,0,8.06793531606919,0,1.33151354837103,0,0 | ||
|short_description=p3@TACR2 | |short_description=p3@TACR2 | ||
}} | }} |
Latest revision as of 01:06, 19 September 2015
Short description: | p3@TACR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TACR2_5end |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | -4bp_to_ENST00000373306_5end |
EntrezGene: | TACR2 |
HGNC: | 11527 |
UniProt: | P21452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.38e-43 | 17 |
gastrointestinal system | 8.04e-30 | 25 |
large intestine | 1.46e-28 | 11 |
colon | 1.11e-22 | 9 |
small intestine | 1.15e-22 | 4 |
hindgut | 3.88e-16 | 19 |
uterus or analog | 5.15e-14 | 1 |
subdivision of digestive tract | 1.58e-13 | 118 |
vermiform appendix | 1.83e-13 | 1 |
caecum | 1.83e-13 | 1 |
midgut | 1.83e-13 | 1 |
vagina | 2.07e-13 | 1 |
adult organism | 7.43e-12 | 114 |
lower digestive tract | 7.51e-11 | 5 |
digestive system | 9.66e-11 | 145 |
digestive tract | 9.66e-11 | 145 |
primitive gut | 9.66e-11 | 145 |
endoderm-derived structure | 1.36e-09 | 160 |
endoderm | 1.36e-09 | 160 |
presumptive endoderm | 1.36e-09 | 160 |
cloaca | 1.79e-08 | 14 |
anal region | 1.79e-08 | 14 |
embryonic cloaca | 1.79e-08 | 14 |
terminal part of digestive tract | 1.79e-08 | 14 |
primitive urogenital sinus | 1.79e-08 | 14 |
proctodeum | 1.79e-08 | 14 |
genitourinary system | 6.07e-08 | 15 |
organ system subdivision | 1.33e-07 | 223 |
urinary bladder | 1.64e-07 | 2 |
lower urinary tract | 1.64e-07 | 2 |