FFCP PHASE1:Hg19::chrX:110513703..110513741,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:110513703..110513741,-
|short_description=p1@CAPN6
|description=CAGE_peak_1_at_CAPN6_5end
|association_with_transcript=9bp_to_ENST00000324068,uc004epc.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=827 | |EntrezGene=827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1483 | |HGNC=1483 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Q1 | |UniProt=Q9Y6Q1 | ||
|association_with_transcript=9bp_to_ENST00000324068,uc004epc.1_5end | |||
|cluster_id=chrX:110513703..110513741,- | |||
|coexpression_cluster_id=C2025 | |||
|description=CAGE_peak_1_at_CAPN6_5end | |||
|id=chrX:110513703..110513741,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.06e-08;5!CL:0000349;1.14e-07;19!CL:0002541;7.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.31e-08,5;CL:0000349,1.14e-07,19;CL:0002541,7.58e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;7.76e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-12!115;UBERON:0005631!1.05e-11!14;UBERON:0000158!1.05e-11!14;UBERON:0005409!6.11e-09!35;UBERON:0003124!4.12e-08!7;UBERON:0001007!4.56e-07!155;UBERON:0001555!4.56e-07!155;UBERON:0007026!4.56e-07!155;UBERON:0004119!4.72e-07!169;UBERON:0000925!4.72e-07!169;UBERON:0006595!4.72e-07!169;UBERON:0004921!5.08e-07!129;UBERON:0004185!5.08e-07!129;UBERON:0000478!5.35e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.85e-13;49!UBERON:0005631;7.27e-11;10!UBERON:0000158;7.27e-11;10!UBERON:0004921;6.33e-09;33!UBERON:0000478;1.75e-08;24!UBERON:0005409;6.96e-07;22!UBERON:0003124;7.57e-07;3!UBERON:0000920;7.57e-07;3!UBERON:0006947;8.08e-07;3!UBERON:0004054;8.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.31e-14,14;UBERON:0000158,5.31e-14,14;UBERON:0003124,1.11e-09,7;UBERON:0007023,1.41e-09,114;UBERON:0000478,1.75e-08,24;UBERON:0005409,4.97e-08,25;UBERON:0000920,7.58e-07,3;UBERON:0006947,8.02e-07,3;UBERON:0004054,8.02e-07,3 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,2.61185628199839,2.7030733015166,1.39560233594486,2.18441372130172,0.263766978228454,0,0,0,0,0,0,0,0,1.25381888591235,0,0,0,0,0,0,0,0,4.18003532953405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0.486634870302636,0.567208902984407,0,0.263504357079378,6.09052701064364,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19552671033272,3.31324420803713,3.137236457477,5.90868013587612,4.79409616663694,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0,0,0,1.574003567695,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,5.13217338068116,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,3.45719551560332,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0.303127571446259,4.99306318531491,8.16453791990137,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,1.80455823272956,0.276242966807689,0,0,0,4.51199612907412,1.15523005656622,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,2.62411716559765,0.325378394664303,172.078489451696,0,0,0.574265537996172,0.650060246036521,0,0.580024309752732,0,1.68854042198743,0.689182862422653,2.90034661144339,1.74020032697074,0.681813019328807,62.4114569883629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,178.684933874327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,10.9822462979337,106.90728509975,14.4365529986639,0,0,0,0,0,3.18796781201712,4.42054264849836,0,0,0,0,0.0898683511473268,0,0,3.25523238601881,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,26.2390326762409,0,0.291604613383254,0,0,0,0,0.221158519862449,0,1.09692698576986,0,0,10.234384381005,0,114.590260480866,2.51321404347362,7.38802129069655,38.2801391678303,138.312366036812,113.536407291969,0,0,0,0,0,0,0,0,0,1.14262965711403,0.706765357169704,3.02944095638928,7.96209544862804,2.0345239835768,15.2757536233406,0,0,0,0,126.00469062591,0,0,1.56531695145672,0,69.4468549014927,65.3349866662785,0,1.13735843331278,0,0,0,0,0,0,0,7.21108299668321,0.347119476670262,0,0,154.458374725955,0,0,0,0,2.71569246167574,0,56.4951851951331,0,0,0,0.977756913674015,0.0801588202515337,6.19013684744122,0.39961921916426,9.50996753217099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,1.79711100449092,0.429226048136571,0.446342914883745,3.22480667936286,0,0,0,0,0.0674035438541849,0,0.423366660328922,0,0,1.60753148465019,4.26372253451425,4.56984371832104,0,0,0,0,11.2692161437853,12.2219190354546,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0,0,0.293104467356165,1.32506888912221,0.129282956361551,0,0,0,0.213574825135389,7.3886023396843,0,2.48083010905975,0,0,0,0,0.5013797880454,1.53172788381731,0.327872630709804,0,0,0,0,0,0,0.310482014706917,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,1.62748293281865,0,0,0,0,0,0,0,0,0,32.8095634803636,1.30497145982606,0,0,0,0,6.48483039038042,0,0,0,0,0,5.52688546769918,0,0,0,0,0.163565394255844,0,0,0,0,0,8.26631902371915,0,0,0,9.95323616052756,0,0.970423302570136,1.41539347670307,0,1.3578602396322,0,21.3169514525484,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.645902582527404,0,0,0,0,0,0,0,0.596748666348824,3.98614740251063,0,4.68908406739856,35.0954970605106,0.327543835020193,0,0.135075169236789,0,0,0.0634158101939068,0,8.22386650285773,8.9318012110073,0,1.27762427639595,0,0,0,0,450.164528575392,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,2.8257513426185,0,0,53.8763645100602,0.647782773655864,0,5.71812353413251,0,0,33.3807882820953,0,0.207216164163037,0.17071847709395,0,18.4997764292719,0,0,35.1411251658471,0,0.31020638566432,0,0,0.196300467230486,1.09726132484042,0,0.513314034281235,327.067669637372,67.0281170421612,0,0.198950775161368,0,0.5647304101948,0,0,1.69783147837478,7.21246549663059,0,0.980593287015622,0,0.392616934229891,0,36.3483925721724,0,1.87967835959707,1.22469987149797,0,0,0,0,49.6628744007632,11.009502801709,0,0,0.0679914901909147,0.436350690340377,57.1348987756633,0,0,0,0,9.06904247298673,0,0.203977659483963,0.534434810531121,0.275684698604535,0,10.5332390523353,5.35928260312357,0,0,3.62497769231668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| ||
|short_description=p1@CAPN6 | |||
}} | }} |
Latest revision as of 01:36, 19 September 2015
Short description: | p1@CAPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPN6_5end |
Coexpression cluster: | C2025_placenta_skeletal_tongue_trachea_chorionic_epididymis_throat |
Association with transcript: | 9bp_to_ENST00000324068, uc004epc.1_5end |
EntrezGene: | CAPN6 |
HGNC: | 1483 |
UniProt: | Q9Y6Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.31e-08 | 5 |
extraembryonic cell | 1.14e-07 | 19 |
chorionic membrane mesenchymal stem cell | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.31e-14 | 14 |
membranous layer | 5.31e-14 | 14 |
chorion | 1.11e-09 | 7 |
adult organism | 1.41e-09 | 114 |
extraembryonic structure | 1.75e-08 | 24 |
gastrointestinal system | 4.97e-08 | 25 |
egg chorion | 7.58e-07 | 3 |
male genital duct | 8.02e-07 | 3 |
internal male genitalia | 8.02e-07 | 3 |