FFCP PHASE1:Hg19::chr22:18324779..18324816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57553 | |EntrezGene=57553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24694 | |HGNC=24694 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-230bp_to_BC064400_5end | |association_with_transcript=-230bp_to_BC064400_5end | ||
|cluster_id=chr22:18324779..18324816,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_MICAL3_5end | |description=CAGE_peak_6_at_MICAL3_5end | ||
|id=chr22:18324779..18324816,- | |id=chr22:18324779..18324816,- | ||
|ontology_enrichment_celltype=CL:0002535!1.98e-10!2;CL:0000181!9.37e-07!12;CL:0000417!9.37e-07!12;CL:0000668!9.37e-07!12;CL:0000414!9.37e-07!12;CL:0000412!9.37e-07!12;CL:0000182!9.37e-07!12 | |ontology_enrichment_celltype=CL:0002535!1.98e-10!2;CL:0000181!9.37e-07!12;CL:0000417!9.37e-07!12;CL:0000668!9.37e-07!12;CL:0000414!9.37e-07!12;CL:0000412!9.37e-07!12;CL:0000182!9.37e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.40e-14;12!CL:0002535;3.42e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-14,12;CL:0002535,3.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.54e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006955!1.98e-10!2;UBERON:0004801!1.98e-10!2;UBERON:0008835!4.12e-10!22;UBERON:0003894!4.12e-10!22;UBERON:0009854!1.25e-09!23;UBERON:0002107!6.74e-09!19;UBERON:0006925!6.74e-09!19;UBERON:0008836!6.74e-09!19;UBERON:0007499!8.85e-09!25;UBERON:0009497!8.85e-09!25;UBERON:0000015!8.85e-09!25;UBERON:0002423!8.85e-09!25;UBERON:0006235!8.85e-09!25;UBERON:0004161!8.85e-09!25;UBERON:0009856!2.10e-08!26;UBERON:0005057!2.34e-08!26;UBERON:0000002!1.80e-07!6;UBERON:0001560!1.80e-07!6 | |ontology_enrichment_uberon=UBERON:0006955!1.98e-10!2;UBERON:0004801!1.98e-10!2;UBERON:0008835!4.12e-10!22;UBERON:0003894!4.12e-10!22;UBERON:0009854!1.25e-09!23;UBERON:0002107!6.74e-09!19;UBERON:0006925!6.74e-09!19;UBERON:0008836!6.74e-09!19;UBERON:0007499!8.85e-09!25;UBERON:0009497!8.85e-09!25;UBERON:0000015!8.85e-09!25;UBERON:0002423!8.85e-09!25;UBERON:0006235!8.85e-09!25;UBERON:0004161!8.85e-09!25;UBERON:0009856!2.10e-08!26;UBERON:0005057!2.34e-08!26;UBERON:0000002!1.80e-07!6;UBERON:0001560!1.80e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.48e-24;19!UBERON:0006925;5.48e-24;19!UBERON:0002423;2.80e-18;25!UBERON:0002365;9.63e-15;31!UBERON:0002330;9.63e-15;31!UBERON:0002368;9.06e-13;33!UBERON:0006955;3.42e-10;2!UBERON:0004801;3.42e-10;2!UBERON:0000949;2.43e-09;43!UBERON:0005172;8.13e-07;52!UBERON:0005173;8.13e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.35e-24,19;UBERON:0006925,5.35e-24,19;UBERON:0008836,5.35e-24,19;UBERON:0008835,9.36e-21,22;UBERON:0003894,9.36e-21,22;UBERON:0009854,7.33e-20,23;UBERON:0007499,2.75e-18,25;UBERON:0009497,2.75e-18,25;UBERON:0000015,2.75e-18,25;UBERON:0002423,2.75e-18,25;UBERON:0006235,2.75e-18,25;UBERON:0004161,2.75e-18,25;UBERON:0009856,1.37e-17,26;UBERON:0002365,8.91e-15,31;UBERON:0002330,8.91e-15,31;UBERON:0002368,4.22e-13,35;UBERON:0006955,3.27e-10,2;UBERON:0004801,3.27e-10,2;UBERON:0000949,3.30e-10,45;UBERON:0003929,1.64e-08,54;UBERON:0005172,1.64e-08,54;UBERON:0005173,1.64e-08,54;UBERON:0002530,8.60e-08,59;UBERON:0002417,1.16e-07,60;UBERON:0000916,1.16e-07,60 | |||
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|short_description=p6@MICAL3 | |short_description=p6@MICAL3 | ||
}} | }} |
Latest revision as of 01:38, 19 September 2015
Short description: | p6@MICAL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MICAL3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -230bp_to_BC064400_5end |
EntrezGene: | MICAL3 |
HGNC: | 24694 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-14 | 12 |
epithelial cell of cervix | 3.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 5.35e-24 | 19 |
digestive gland | 5.35e-24 | 19 |
liver bud | 5.35e-24 | 19 |
hepatic diverticulum | 9.36e-21 | 22 |
liver primordium | 9.36e-21 | 22 |
digestive tract diverticulum | 7.33e-20 | 23 |
epithelial sac | 2.75e-18 | 25 |
epithelium of foregut-midgut junction | 2.75e-18 | 25 |
anatomical boundary | 2.75e-18 | 25 |
hepatobiliary system | 2.75e-18 | 25 |
foregut-midgut junction | 2.75e-18 | 25 |
septum transversum | 2.75e-18 | 25 |
sac | 1.37e-17 | 26 |
exocrine gland | 8.91e-15 | 31 |
exocrine system | 8.91e-15 | 31 |
endocrine gland | 4.22e-13 | 35 |
uterine epithelium | 3.27e-10 | 2 |
cervix epithelium | 3.27e-10 | 2 |
endocrine system | 3.30e-10 | 45 |
gut epithelium | 1.64e-08 | 54 |
abdomen element | 1.64e-08 | 54 |
abdominal segment element | 1.64e-08 | 54 |
gland | 8.60e-08 | 59 |
abdominal segment of trunk | 1.16e-07 | 60 |
abdomen | 1.16e-07 | 60 |