FFCP PHASE1:Hg19::chr1:6845497..6845561,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23261 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18806 | |||
|TSSclassifier=strong | |||
|UniProt=Q96S92,G3V3Z7 | |||
|association_with_transcript=0bp_to_ENST00000473578,ENST00000476163,ENST00000490738,ENST00000557126_5end | |||
|cluster_id=chr1:6845497..6845561,+ | |||
|description=CAGE_peak_1_at_CAMTA1_5end | |||
|id=chr1:6845497..6845561,+ | |||
|ontology_enrichment_celltype=CL:0002321!6.16e-07!248;CL:0000221!8.99e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.36e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.67e-14!312;UBERON:0000483!1.76e-13!309;UBERON:0000481!2.41e-12!347;UBERON:0000477!8.21e-12!286;UBERON:0004111!5.71e-11!241;UBERON:0003075!6.36e-11!86;UBERON:0007284!6.36e-11!86;UBERON:0000468!6.91e-11!659;UBERON:0000025!1.06e-10!194;UBERON:0003103!4.09e-10!69;UBERON:0000467!6.83e-10!625;UBERON:0000480!1.26e-09!626;UBERON:0002346!1.72e-09!90;UBERON:0000922!3.55e-09!612;UBERON:0000033!9.75e-09!123;UBERON:0000064!1.03e-08!219;UBERON:0005743!2.56e-08!86;UBERON:0001017!4.09e-08!82;UBERON:0000923!6.04e-08!604;UBERON:0005291!6.04e-08!604;UBERON:0006598!6.04e-08!604;UBERON:0002532!6.04e-08!604;UBERON:0002050!7.45e-08!605;UBERON:0005423!7.45e-08!605;UBERON:0001049!1.29e-07!57;UBERON:0005068!1.29e-07!57;UBERON:0006241!1.29e-07!57;UBERON:0007135!1.29e-07!57;UBERON:0000475!2.16e-07!365;UBERON:0007100!2.53e-07!27;UBERON:0002616!3.03e-07!59;UBERON:0000153!3.10e-07!129;UBERON:0007811!3.10e-07!129;UBERON:0000062!5.14e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.92e-07;30!UBERON:0001008;4.92e-07;30!UBERON:0007100;5.02e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.47e-14,309;UBERON:0000483,1.09e-13,306;UBERON:0010314,2.23e-13,132;UBERON:0003075,1.01e-11,82;UBERON:0007284,1.01e-11,82;UBERON:0004111,2.28e-11,240;UBERON:0000025,4.26e-11,192;UBERON:0003103,2.40e-10,68;UBERON:0002346,3.56e-10,86;UBERON:0010371,3.46e-09,104;UBERON:0000922,1.20e-08,592;UBERON:0005423,1.61e-08,581;UBERON:0001017,1.74e-08,81;UBERON:0001049,4.62e-08,56;UBERON:0005068,4.62e-08,56;UBERON:0006241,4.62e-08,56;UBERON:0007135,4.62e-08,56;UBERON:0007100,2.53e-07,27;UBERON:0000073,2.83e-07,53;UBERON:0002616,2.83e-07,53;UBERON:0000955,8.00e-07,68;UBERON:0006238,8.00e-07,68;UBERON:0002050,9.25e-07,564 | |||
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| |||
|short_description=p1@CAMTA1 | |||
}} |
Latest revision as of 02:39, 19 September 2015
Short description: | p1@CAMTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAMTA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473578, ENST00000476163, ENST00000490738, ENST00000557126_5end |
EntrezGene: | CAMTA1 |
HGNC: | 18806 |
UniProt: | Q96S92G3V3Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.36e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.47e-14 | 309 |
epithelium | 1.09e-13 | 306 |
structure with developmental contribution from neural crest | 2.23e-13 | 132 |
neural plate | 1.01e-11 | 82 |
presumptive neural plate | 1.01e-11 | 82 |
anatomical conduit | 2.28e-11 | 240 |
tube | 4.26e-11 | 192 |
compound organ | 2.40e-10 | 68 |
neurectoderm | 3.56e-10 | 86 |
ecto-epithelium | 3.46e-09 | 104 |
embryo | 1.20e-08 | 592 |
developing anatomical structure | 1.61e-08 | 581 |
central nervous system | 1.74e-08 | 81 |
neural tube | 4.62e-08 | 56 |
neural rod | 4.62e-08 | 56 |
future spinal cord | 4.62e-08 | 56 |
neural keel | 4.62e-08 | 56 |
primary circulatory organ | 2.53e-07 | 27 |
regional part of nervous system | 2.83e-07 | 53 |
regional part of brain | 2.83e-07 | 53 |
brain | 8.00e-07 | 68 |
future brain | 8.00e-07 | 68 |
embryonic structure | 9.25e-07 | 564 |