FFCP PHASE1:Hg19::chr11:64122773..64122797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=283234 | |EntrezGene=283234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26757 | |HGNC=26757 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000472524_5end | |association_with_transcript=-17bp_to_ENST00000472524_5end | ||
|cluster_id=chr11:64122773..64122797,+ | |||
|description=CAGE_peak_3_at_CCDC88B_5end | |description=CAGE_peak_3_at_CCDC88B_5end | ||
|id=chr11:64122773..64122797,+ | |id=chr11:64122773..64122797,+ | ||
Latest revision as of 03:21, 19 September 2015
| Short description: | p3@CCDC88B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CCDC88B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -17bp_to_ENST00000472524_5end |
| EntrezGene: | CCDC88B |
| HGNC: | 26757 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CCDC88B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| artery | 1.31e-08 | 42 |
| arterial blood vessel | 1.31e-08 | 42 |
| arterial system | 1.31e-08 | 42 |
| splanchnic layer of lateral plate mesoderm | 1.98e-08 | 83 |
| epithelial tube | 3.23e-08 | 117 |
| epithelial tube open at both ends | 2.16e-07 | 59 |
| blood vessel | 2.16e-07 | 59 |
| blood vasculature | 2.16e-07 | 59 |
| vascular cord | 2.16e-07 | 59 |
| systemic artery | 3.35e-07 | 33 |
Showing 1 to 10 of 13 entries
